Contarinia nasturtii (swede midge): 116338560
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Entry
116338560 CDS
T08003
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase nop2-like
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cns03009
]
116338560
Enzymes [BR:
cns01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
116338560
Ribosome biogenesis [BR:
cns03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
116338560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Fibrillarin
Motif
Other DBs
NCBI-GeneID:
116338560
NCBI-ProteinID:
XP_031619770
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MGRKGLFAEKPKKGPGRKAKKQGPPVLSRQFKAEKENKDEQILSHRQKQRLVKRVKKQEE
KKIKMSGYGRNKNKQNQPKKVYASDTDEEESDAEENQVESGEESDESESGTRGFTDDNNE
WLKPKKSNQSAEEEIEEDSEEIEEELEEESENDDNLKVESLANYTDDDDDEEDDDDMFDS
DEDEAEDDDNDDDEEDLLPIEKKNRQLRIKQAKEAKMAEEELQESLANQEVFEFPDENDD
TPVTLQIVQQRIKDISVVLADFNRRRLPNKSRQDYLELLRKDLCMYYSYNDFLMEKLMQI
FPVNELFEYLEASEVPRPLTIRTNSLKTRRRDLAAALINRGVNLDPLGKWTKVGLVVYNS
NVPLGATPEYLAGHYMIQGASSMLPVMSLAPQENERVLDLCAAPGGKSSHISALMKNTGV
LFSNDANRDRIKAVVGNFHRLGVMNAVVSCEDGCKYKSIMTGFDRILVDAPCTGTGVISK
DPSAKTSKSEIDVQRCYNIQRKLLLTAIDCVSAKSPTGGYIVYSTCSILPEENEWVIDYV
LKKRNVKLVSTGLDFGTEGFVNYRQHRFHPTMKLTRRYYPHTHNMDGFFVAKLKKFSDVI
PISKDGDNENDTEIVDENSTSNVETESTNGDTTDQTKGKKRKLAGKPTLTPEEKKRKKEE
EEKKYVAKVYEKPQKITKKKKKPQSNEKTQKNVKQQKNKNNKKKN
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcaaaggtttatttgccgaaaaaccaaaaaaaggtcctggtagaaaggctaag
aagcaaggcccaccagtgcttagtagacaattcaaagctgaaaaagagaataaagatgaa
caaatattgtcacatcggcaaaaacagcgtttggtgaaacgtgtaaagaagcaagaagag
aagaaaattaaaatgagcggttatggccgtaataaaaataaacaaaatcaaccgaaaaag
gtatacgccagtgacacagatgaagaagaaagtgatgctgaggaaaatcaagtggaaagt
ggcgaggaaagtgacgaaagtgaaagtggaactcgtggttttaccgatgacaataatgaa
tggctaaaaccaaaaaagtcaaaccaatcagctgaagaggaaattgaagaagacagtgaa
gagatagaagaagaattggaagaagaatcggaaaatgatgacaatttaaaggttgaaagt
ttggcaaactacaccgatgatgatgatgacgaggaggatgacgatgatatgtttgatagc
gatgaagacgaagcagaggatgatgataatgatgatgatgaggaggatttgctgccaatt
gaaaagaaaaatcgacaacttcgaatcaagcaggcgaaagaagccaaaatggccgaagaa
gaattgcaagaaagtttggcaaatcaagaagtattcgaatttcccgatgaaaatgacgat
acaccagtcacattgcaaattgtacaacaacgaattaaggatatatcggttgtattggcc
gattttaatcggcgacgtttgccaaacaaatcacgtcaagactatttggaattgttacgt
aaagatttgtgcatgtattacagttacaatgattttctaatggaaaaattgatgcaaatc
tttccagtaaatgaactatttgaatatttagaagcatcggaggtaccacggccgctaaca
attcgtacaaatagcttgaaaacacgtcgtcgtgatttggctgcagctctaatcaatcgt
ggcgtcaacttggatccacttggtaaatggaccaaagttggtttagttgtttacaattcg
aatgttccattgggcgccacacctgaatatctagctggacattatatgatccaaggcgca
agtagtatgttacccgtaatgtcattagcaccgcaagagaatgagcgtgtattggatttg
tgtgcagcacccggtggtaagagttcacacatttcagcactcatgaaaaataccggcgta
ctattttcaaacgatgcaaatcgtgatcgtattaaagcggttgttggtaatttccatcga
ttgggcgtaatgaatgcggtcgttagttgtgaagatggttgtaaatacaagagcataatg
actggatttgatcgaattttagtcgatgccccatgcactggaaccggtgtcatttcaaaa
gatccaagtgcaaaaacatcaaaatccgaaattgatgtacaacgttgttacaatatacaa
cgaaaattattgctaaccgctatcgattgtgtgagtgctaagagtccaactggtggttat
attgtctattcaacatgttccattttacccgaagaaaatgaatgggtcattgattatgta
ctgaagaaacgaaacgttaaacttgtttcaactggtcttgattttggaacggaaggtttt
gtaaactatcgccaacatcgattccatccaacaatgaaacttacacgtcgctactatcca
cacacgcacaatatggatggattctttgttgcaaaactcaagaaattctccgatgttatt
ccaatttcaaaagatggcgacaatgaaaacgatacagaaatcgttgacgaaaattccaca
tcgaatgttgaaacggaatccactaacggtgacacaaccgatcaaacaaaaggtaaaaag
cgaaaattagctggcaaaccaacattaacgccagaagagaagaaacgtaaaaaggaagaa
gaagaaaagaaatacgtggccaaggtgtatgaaaaaccacagaaaattacaaagaagaag
aagaagccacaaagtaatgagaaaacacagaagaatgtgaaacaacaaaaaaataaaaat
aataaaaagaaaaattaa
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