Contarinia nasturtii (swede midge): 116338590
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Entry
116338590 CDS
T08003
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116338590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cns03021
]
116338590
03036 Chromosome and associated proteins [BR:
cns03036
]
116338590
Transcription machinery [BR:
cns03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116338590
Coactivators
SAGA/TFTC/STAGA complex
116338590
Chromosome and associated proteins [BR:
cns03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
116338590
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
SDA1_HEAT
Motif
Other DBs
NCBI-GeneID:
116338590
NCBI-ProteinID:
XP_031619814
LinkDB
All DBs
Position
Unknown
AA seq
839 aa
AA seq
DB search
MTTKSMQYIDANQNIVANSKMPGVQVVNMRPNEPSTQNKTVSPRVVINPHMVATRPANPG
ITLSALQTGQPGSALLLKTENGQYRLLHVGPSTQTTQQNLPNSGVNPTIRIQTVPSVSRF
TGPPLALRKTIVTQQPVKTKQVSTATPIVVNSVHTTSAINTVTRSRESINTSQLPPIATV
APVSHTIQQAALTPQPQIQTQQVNAPNAVPASIVTTSATPSHANLNNTKEKCRKFLSNLL
ELSSREPKPVEQNVQELIQELIDANVEPDQFCDRLERLLNASPQPCLIGFLKKSLPLLRQ
SLCRKELTIEGIKPPPHNVAFGPYTTSNIAAQVRPVVNLPAAAVRMVPQTTRPAITKHTA
PVRLRLNPVQTNVEPNGAIQAPINVPRMMNSTQIRASSGAAIIQQHPANVQIQSHPPALH
PVSQNAFAPGGAQIRATNVSLARSSPATVQIRQTVMENGAHIIQHNAKMLKTTAVGNTIQ
QQSVTPTIKVGSTQIKPIINTSNAAQPQPIIISQPPVPKLEASEPMNKGTAKDTSANTTS
STITTPASPKMVPIKNQSGSASSKSSAANKEKERKASASFFQQSSMSSSMYGDDDINDVA
AMGGVNLAEESQRILGSTELIGRQIRSCKDEVFLHLPALQARIRGIMSKHGLDEPGNEVA
VLISHACQERLKNIVEKLAVIAEHRIDIIKIDPRYEITKDVRGQIKFLEELDKAEQKRHE
EQEREMLMRAAKSRSKTEDPEQAKLKAKAKEMQRAEMEELRQRDANLTALQAIGPRKKPK
LENDTTIAATAGGNTLGIGGATVPLRPRIKRVNLRDMIFYLEQERDTCRSTMLYKSYLK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaaaatcgatgcaatacatagatgcaaatcaaaatatcgtagcgaattcaaag
atgcccggtgtgcaagttgtaaatatgcgaccaaatgaaccatcgacacagaataaaacg
gtttcacctcgagtagttatcaatccacacatggtggcgacgaggccggccaatcccggt
attacgttaagtgcattgcaaacgggacaaccgggttcggcgctgctactcaaaacggaa
aatgggcaatatcgtttactgcatgtcggcccatcaacgcaaacaacacaacaaaatcta
ccaaatagtggtgtaaatccaacaattcgtatacaaacggttccatctgtaagtagattc
accggaccaccattagcactcagaaaaacaattgtaactcagcagccagtgaaaacgaag
caggtgtcaacggcaacaccaatagttgtaaattcggttcacacaacgtcagcaataaat
acagtgactagatctcgagagagtatcaatacaagtcaattaccgccaatagccaccgta
gcacctgtatctcatacaatccaacaagcagcattaacacctcagcctcaaattcaaacg
cagcaagtgaatgcaccaaacgcggtgccagctagcattgttacaacgagtgcaactcct
tcgcatgccaatttaaataataccaaagagaaatgtcggaaatttttatctaatttattg
gaattgtcgagcagagaaccaaaaccggttgaacaaaatgttcaggaacttatacaagaa
ctgatcgatgcaaatgtggaaccagatcaattttgcgatcgacttgaacgtttattaaac
gcaagtccgcaaccatgtctcattggctttttaaagaagagtttaccgctccttcgacaa
tcgttatgtaggaaggaactgacgattgagggaataaaaccgccaccgcataatgttgca
ttcggaccatatacaacgtcgaatattgccgctcaagttagacctgtagttaatttacca
gcagcagccgttcgtatggttccccaaacaacacgaccagcaatcactaaacatactgcc
ccagttcggcttcgattgaatcctgtgcagacaaacgttgaacccaatggagcgattcaa
gcgcctataaatgtgccgagaatgatgaattccacacaaatccgtgcttcaagtggtgca
gcaatcatacaacagcatcctgcaaatgtacaaattcaatcacatccgccagctttacat
cccgtcagccaaaatgcttttgcaccaggtggagcacagatacgtgccacaaatgtatct
cttgcgcgttcgtctccagctacagttcaaattagacaaacggtaatggaaaatggtgca
cacatcattcaacataatgcaaaaatgttgaaaacgactgccgtaggtaatacaattcaa
caacagtcagtaacaccaacgataaaagtgggatcaacgcaaataaaaccgataatcaat
acatcaaatgcagcacagccacaaccaattatcatatcacagccacctgttccaaagctg
gaggcatcagaaccaatgaacaaaggcacagctaaagatacttccgcaaatacaacatct
tccacaataacaacacctgcctcaccgaaaatggttccgattaaaaaccaatcgggttca
gcgtcatcaaaatcgagcgccgcaaacaaagaaaaggaacgaaaagcatcggcttcattt
ttccaacaatcatcaatgtcttcttcgatgtatggcgatgacgatataaacgatgttgcc
gctatgggtggtgtcaatttggcggaagaatcacagagaattttaggttcaacagagtta
atcggtcgtcagattcggtcgtgtaaagatgaagtgttcttacatttgccggcgcttcaa
gcgcgaattcgtggtatcatgagcaaacatggtttggatgagccaggcaacgaagttgct
gttctcatatcgcatgcatgccaagagcgtttaaaaaatatcgttgaaaaattggctgtg
atagccgaacatcgaatcgacataatcaaaattgatccacggtatgaaattacgaaagat
gtacgcggtcaaattaaatttctcgaagaactggataaggctgaacaaaaacggcacgaa
gaacaagaacgtgaaatgctaatgcgtgcggctaaatcaagatcaaaaactgaggatcct
gaacaggccaaacttaaagcgaaggctaaagagatgcaacgggctgaaatggaggagctt
cggcaacgagatgcgaatttgaccgctttgcaagctattgggccacgtaaaaaaccaaaa
ctcgagaatgacacgacaattgcggcgacggcgggaggcaacacattaggtatcggaggc
gcaactgtaccacttcgaccgcgtattaagcgggtcaatttacgagatatgatcttttat
ttagaacaagagcgtgacacatgtaggagcacaatgctgtataaatcatacctcaagtga
DBGET
integrated database retrieval system
