Contarinia nasturtii (swede midge): 116338605
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Entry
116338605 CDS
T08003
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03022
Basal transcription factors
cns03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116338605
09124 Replication and repair
03420 Nucleotide excision repair
116338605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cns03021
]
116338605
03400 DNA repair and recombination proteins [BR:
cns03400
]
116338605
Transcription machinery [BR:
cns03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
116338605
DNA repair and recombination proteins [BR:
cns03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
116338605
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
zf-C3HC4
zf-UDP
TRAF3_RING
zf-RING_4
zf-RING_2
zf-C3HC4_2
KH_PARP14_5
zf-P11
ATG14
Motif
Other DBs
NCBI-GeneID:
116338605
NCBI-ProteinID:
XP_031619851
LinkDB
All DBs
Position
Unknown
AA seq
321 aa
AA seq
DB search
MEDQVCPKCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVKGSGSCPECNVPLRRNNFRV
QMFEDPMVEKEVDIRKRILRDYNKKEEDFATTREYDDYLEEIEQIIYNLCNNIDIINTNK
RIEQYKRENREMINKNKSRMGREELELEIELEREKTEELQRQKERETIENEAKKKKLKEK
EALIDELMFSHEDAKSIVKGYAENVEKLREEEKEILAVVKKQSEFSTGVKFGQQTQFLPV
PKIEEGPLYTYEEPVVIVDGPLAPSIAEIEHRGYTRHVRTETAGERAGGYKCGLACQRAL
QEALQSLFHVKTPEQTPFATN
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggaagaccaagtgtgtccaaaatgtaagacaacaaaatatcgaaatccatcattaaaa
ttgatggtcaacgtttgtggccatacattatgtgagagctgtgtcgatctactctttgta
aaaggttctggatcgtgcccggaatgcaatgtgccattacgtcgaaataatttccgtgtt
cagatgttcgaagatcccatggttgaaaaggaagtggacattcgaaagcgtattcttaga
gattacaacaaaaaggaagaggactttgcaacgacacgtgaatacgatgattatttggaa
gaaattgaacaaattatttacaatttgtgcaacaacatcgacattattaacacaaacaaa
cgaatcgaacagtataaacgagagaatcgtgaaatgataaataaaaataagtcacgaatg
gggcgtgaagagcttgaattagaaatcgaattggaacgagaaaagacagaagaattacaa
cgtcaaaaggaacgcgaaacaatcgaaaatgaagctaaaaagaaaaaactgaaggaaaaa
gaggctctgatcgatgaattaatgtttagtcacgaagatgctaaaagcattgtcaaagga
tatgcggaaaatgtagaaaaattacgtgaagaagagaaagaaatattggctgtggttaaa
aaacaatcggaattttcaacgggcgttaagtttggacagcaaacacaattcttaccggta
ccaaaaatcgaagaaggaccattgtatacatatgaagaaccagtggtaattgttgacggt
ccacttgcaccaagtatagccgaaatcgaacacagaggatacacacgtcatgttagaacc
gaaacggccggggaacgtgcaggcggctataaatgcggactggcttgtcagcgtgcactt
caagaagctttgcaaagtctcttccatgtaaaaacaccagaacaaacaccgtttgcaacg
aattaa
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integrated database retrieval system
