Contarinia nasturtii (swede midge): 116338639
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Entry
116338639 CDS
T08003
Name
(RefSeq) uncharacterized protein LOC116338639
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116338639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cns03009
]
116338639
Ribosome biogenesis [BR:
cns03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
116338639
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP6_C
U3_assoc_6
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
NRDE-2
DUF1122
Motif
Other DBs
NCBI-GeneID:
116338639
NCBI-ProteinID:
XP_031619899
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MGDGLDRTLRTEYDQMRILDIYSDAEILEIKEKRENFENKISQPSRVIKDYVEYIKYERS
LIATTKERIKQQKITMTHSILLQIADRMKKLYAEALSKFPNNIRFWNEYIKFLQTFKYTK
DISSTFERMLQFHSDKVDAWNRAILWEYNENFNDEHIKTLQSRAQQLHPDSEQLYLTFFQ
IELENKRQSDELEALQNAAIIYSNIKNKVTNIDFYFEMLNIVDKFKYANSIQQTILNDMR
VLFPSEALIRHKLAQRELNGLSTVDCKMDFTGLIKKEGGECNGEDSKSMLLSLKKLKIED
LSAPPQHTLKKRIELSIQTYEEAIKVINTDTMWSYYIETMIEINKDLSTHALLKRQALRK
ALDGAYASNHMSENHYLLYIQQLYTNNPQDQNIENVLKKATQMYEGSLSIWLLCLRYYIQ
DENGFAKVRENFKKAKIALGPRGADIWELYFLYLKTWYTPEGLKGRARTEARRQAQHELD
RFISDLKQQTHAAFNQLKDQVLDTVANTPNIPE
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatggattggatcgtactctgcgtacagaatacgaccaaatgcgtattctggac
atctattccgatgcagaaattttagaaataaaagaaaaacgagaaaattttgaaaataag
atctcacaaccatcccgtgtaataaaagactatgtcgaatatataaaatatgaacgaagt
ttgatagcaacgaccaaagagcgaatcaaacaacaaaaaatcactatgactcattcgatt
ttattacaaattgccgaccgcatgaagaaattgtatgcagaagctctgtccaaattccca
aacaatatccgcttttggaatgaatatatcaaattcttgcagacattcaaatacaccaag
gatatatcttcaacatttgaacgaatgttacagttccattcggataaagtggatgcttgg
aatcgtgcaattttgtgggagtataatgagaatttcaatgatgaacacattaaaacgtta
caatcacgtgcccagcaactccatccagactctgaacaactctatcttacattctttcaa
attgaattggagaataagcgtcaatccgatgagctggaagcattacaaaatgctgctatt
atttacagtaacatcaaaaacaaagttaccaacattgatttttactttgagatgctgaac
attgtcgataaattcaagtatgccaactcaattcaacagacaatattgaatgatatgcga
gtgttgtttccgagtgaagcacttataaggcataaattagcacagcgtgaattgaatggc
ctgtcaaccgttgattgtaaaatggactttactggtttgataaaaaaggaaggcggtgaa
tgcaatggagaagacagtaaatcgatgttgttgagtttgaaaaagttaaaaatagaagat
ctatcggctccaccacagcatacgctaaaaaaacgcattgaattatcgattcaaacttat
gaggaagctatcaaagtgattaacacggacacaatgtggagctattacattgagaccatg
atagaaataaataaagatttatccacacatgcgctattgaagcgacaagccctgcgaaag
gcgctcgatggagcctatgcatcaaatcatatgtccgaaaatcattatttactgtacatt
caacaattgtatacaaacaatccacaagaccagaacattgaaaatgtcttaaaaaaggcg
acgcaaatgtacgaaggttcattaagcatttggcttctatgtttgcgttattacatacag
gatgagaatggttttgcgaaggttcgagagaatttcaaaaaagccaaaattgcgctcggc
ccaagaggtgcagacatatgggaattatattttttatatttgaaaacatggtatacgcct
gaaggattgaagggaagagctcgcacagaagctcgacgtcaagcacaacatgaattggat
cgattcatttctgatttgaaacaacaaacacatgctgcgttcaatcaactgaaagatcaa
gtcttggatactgtagcaaatacaccaaatatccccgaataa
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