Contarinia nasturtii (swede midge): 116338674 Help Entry 116338674         CDS       T08003                                  Name (RefSeq) ribonuclease 3-like   KO K03685   ribonuclease III [EC:3.1.26.3] Organism cns  Contarinia nasturtii (swede midge) Pathway cns03008   Ribosome biogenesis in eukaryotes Brite KEGG Orthology (KO) [BR:cns00001]  09120 Genetic Information Processing   09122 Translation    03008 Ribosome biogenesis in eukaryotes     116338674  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cns03019]     116338674    03009 Ribosome biogenesis [BR:cns03009]     116338674    03036 Chromosome and associated proteins [BR:cns03036]     116338674 Enzymes [BR:cns01000]  3. Hydrolases   3.1  Acting on ester bonds    3.1.26  Endoribonucleases producing 5'-phosphomonoesters     3.1.26.3  ribonuclease III      116338674 Messenger RNA biogenesis [BR:cns03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      116338674 Ribosome biogenesis [BR:cns03009]  Eukaryotic type   90S particles    RNase     116338674  Prokaryotic type   rRNA processing factors    116338674 Chromosome and associated proteins [BR:cns03036]  Eukaryotic type   Gene silencing    microRNA pathway     Microprocessor complex      116338674 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Prenyltrans Ribonuclease_3 Ribonucleas_3_3 dsrm RM44_endonuclase Motif Other DBs NCBI-GeneID:  116338674 NCBI-ProteinID:  XP_031619944 LinkDB All DBs Position Unknown AA seq 1996 aa AA seqDB search MDIPDQLRNLQQLKKLRFDDEKYKTATSLEQAEIERRVEKCYDRFEQVRYLENKKALPSL HRLQHIKFLENMLRSLSTNYQCLDSSRPWLIYWILNAAHLLNFRFPDELLSRVVKFLVKC RSNDGGFGGGPGQVPHLATTYGSVNALCIIGTPEAYDAINKPTLLKFLYRVRDDKTGAFR MDTDGEIDVRGSYCAVSVAKLVNISAEEEAKLFNGTVDWIASCQTYEGGMGGVPDKEAHG GYTFCGIAALALLGSTGKCNLDALLRWTVNKQMKFEGGFQGRTNKLVDGCYSFWCGAIVP IVQAVLCKKEPYLSRILKKPVFDVRALQEYIFICCQRPSGGLIDKPDTPPDLYHTCYTLS GVSISQHSEIDADPFVIGDIVTNELLPTHPLYNTPPKSAWQAFVHFQNYGNNGECCFEGE TTNQDCDKNDDLNGHQCAMSYPNRFDASQANNKGQTQNNEYQGPFYVQSYGSTAAPTNPI PPVCPVTNTFFPPVNFSVPPPNFNNAQMNIYTTQLPPPPQPSSVHQYNQQQQIYRQRHSY QNSRDHSAPVRSSKFDERRDTKKCHDLQSSRKPDDSTRSFERNRNRDRDSNRNRDRDGER NKDRDRYRNQDRRRDRDRETHRNRDKVVVDKRRIRDRKSDNVNDPPRRDDHKRNRDRDRD AKDRVKDKSRDRSYQNCDNRGRKYSTHPDRSRSDSTFSKTSTSSKSDTRNIDDRTNSVQL KPSSSCSSRTLSTKRETSQARSDGCETKNSPEKSLSVKEPTERARILQKWRSNFCKTSED ITRKLEELNEDAEKETYIRSSPAELFYRRTPNNEIEGKTRSEHLCNLFRFELVERGKRAR QSKPVIVDKPRKRRHRVCRHKGDDKCSSSDSSDNDLHIEDDSPMEELTKKTKHPYRLHKD LWHNEPGEMNDGPLCRCSAKSRRTGIRHNIYPGEEIIPKCLPNSNNATKLYHYKITVSPP TNFLTKTPTMIKHDEHEFLFEGFSLLSHQPLGEFPDCTVIRFNIEYKIMYFEEKMPENFT IQELDLFTEYLFGEILEMTDFSVLPKQNDDTCSLFHFFPRFVRAIPDNGKEILSMSVVLK YLLDNSGPLVDGSILKDMDKVHQREWQEYVDEVKGMVVTNPGMKPCSIRVDQLDRNVGDL PNCVDPEDANIVHPVIVHFAVRPPQLSYAGNSEYQKSWREYVKFRHLVANMSKPSYEDKR KLEAKESRLQEMRTEGRFKRNIPVDISSKGFYRTGIMCDIVQHALLIPVLTTHLRFHQSL NLLENNIQYKFKNRYLLQLALTHPSYKENFGTNPDHARNSLSNCGIRQPEYGDRKIHYLH ARKRGINTLINIMSLFGKENATESSITHNERLEFLGDAVVEFITSVHLFLMFPDLEEGGL ATYRAAIVQNQHLAVLAKKLRLDEFMLYAHGSDLCHELELRHAMANCFEAFMGALHLDGG IEVADKVFGTTLFLENDTLKRVWVNLPQHPLQEQEPLGDRQWIKDYPLLQSLVKFEDTIG AKFHHIRLLARAFTDRSIGYTHLTMGSNQRLEFLGDTVLQLICSEFLYRHFPEHHEGHLS LLRSSLVNNRTQAVVCDDLGMTEYAIYANPKTELKTKDRADLLEAFLGALYVDKGLAYPE VFCQVCLFPRLQMFIMNQDWNDSKSKLQQCCLTLRTMDGGEPDIPVYKVIECTGPTNTRV YKVAVYFRGKRLASSSGHSIQQAEMEAAKTALENSSALFPQLDYQKRVIANSMKRQKGKP YTREQKRNRTELQKIAKKIAEDDSHLPKQYRINEKSNKQSSDESNSLKSDSDGKYSDSSH LSCSTNKTKRTKQKKKHKHRKKNRANDEDEPHLKCKDENKQELQSMQEKLETQINETNAN TIQDFTKHNDVEDDLAIENYHSDESDTFKSDSDAKYSDSSHFSCSSRSERIKHKKKLTYR MKDHARDDSDESHLTCKNENNQELQNMQERLDVQMYESNANTTEHLTKQNEVEYDLEIET IDSGDDIASLESGEIS NT seq 5991 nt NT seq  +upstreamnt  +downstreamnt atggatattcccgatcagctacgaaatctacaacaattgaaaaaactaagattcgacgat gaaaagtataaaacggctacatcattagagcaggctgaaatcgaacgtcgtgtggaaaaa tgttacgatcgtttcgagcaagttcgttatttggaaaataaaaaagcattgcccagcctg catcgtttgcagcatataaaatttttggaaaatatgcttcgatcgttgtcaaccaattat cagtgcttggacagtagtcgtccatggttgatttattggattttaaatgcggcccatttg ttaaattttcgctttcccgacgaattattatcgcgagttgtaaaatttttagtcaaatgt cgttcaaatgatggcggatttggcggtggtcccggacaagtgccacatttagcaacaaca tacggttcggtaaatgctttatgcataatcggaacaccagaagcttatgatgccattaat aaaccaacgttgttgaaatttttgtaccgtgttcgtgatgataaaactggtgcctttcgc atggacactgatggtgaaattgatgttcgtggttcatactgtgccgtttcggttgcaaaa ttagttaacatatcagccgaagaagaggcaaaactgttcaatggaactgtcgattggatt gcatcctgtcaaacatacgaaggcgggatgggtggtgtacccgacaaagaagctcacggt ggatacacattttgtggtattgccgcacttgctttgctcggatcaacagggaaatgcaat ttagatgctttacttagatggacagtgaataaacaaatgaaatttgaaggtggcttccag ggaagaacaaataaattagtcgatggatgctattcattttggtgcggagcaattgtgcct attgtacaagccgttttatgtaaaaaagaaccatatttgagtcgaatactcaaaaaaccg gtatttgatgtgcgcgcattacaggagtacatttttatttgctgtcaacgtccatcaggc ggtttgattgacaagcctgatacaccacccgatctttatcacacatgttatacattgagc ggtgtatcgatttcacaacattcagaaatagatgccgatccattcgttattggtgatatt gtgactaatgaattattaccaacacatccgttatataatacacctccaaaatctgcatgg caggcattcgtgcattttcagaattacggcaacaacggcgaatgttgctttgaaggtgaa acaaccaatcaagattgtgacaaaaatgatgacttaaatggccatcaatgtgcaatgagc tatccaaatcgatttgatgctagtcaagcaaataataaaggtcaaacgcaaaataatgaa tatcagggaccattttatgtacaatcatatggtagcacggccgcaccaacaaatccaatt ccgccagtttgtcctgttacaaacacattttttccacccgtcaactttagcgttccgcca ccaaatttcaacaatgcacaaatgaacatatacacaacccagctaccaccacctccacaa ccgtcgtcagttcatcaatataatcaacaacaacaaatatatcgacaacggcattcgtat caaaattccagagaccattcagcacctgttcgcagttcaaaatttgatgagaggagagat actaaaaaatgtcatgaccttcaatcatcacgaaaacctgatgattcaacacgttcattt gaaagaaatcgaaatagagacagagatagtaatagaaatagggacagagatggtgaaaga aataaagacagagacagatatagaaatcaagatagacgcagagatagagacagagaaaca cacagaaatagagacaaagttgtggttgacaaaaggcggattagagatagaaaaagtgac aatgtcaatgacccacccagaagagatgatcacaaaaggaatagagatcgggacagagat gctaaagaccgggtgaaagacaaaagccgagaccgaagttaccaaaattgtgataatcgt ggccgaaaatatagtacacatccggatcgaagtagaagcgattcaactttttcaaagaca tcaactagttcgaaaagtgacacacgaaatattgatgatcgaacaaattcggttcaacta aaaccaagttcaagttgctcatcgcgtactttgtcaactaaacgagaaacgtcacaggct cgatccgatgggtgtgaaactaaaaattcgcccgaaaaatcattatcagtcaaagaacct accgaaagggcacgcattttacaaaagtggcgcagtaatttttgtaaaacttctgaagat ataacgcgtaaattagaagagttgaacgaagatgcagagaaagaaacttatatacgatcg tcgccggctgagttgttttatagacgaacaccgaacaatgaaatcgaaggcaaaacacgc tccgagcatttatgcaatttatttcggtttgaacttgttgaacgcggtaaacgtgcacgc caatccaaaccggtgattgtcgacaagcccaggaaacgacggcatcgcgtgtgccgacat aaaggagatgataaatgctcatcatctgattcgtcagataatgatttgcatatcgaagac gattctcccatggaagaattaacgaaaaaaacaaaacatccatatcgattgcataaggat ttatggcacaatgaacccggtgaaatgaatgatggcccattgtgtcgatgctcggcaaag tcacggcgaaccggcatacgacacaacatttatcccggtgaagagataataccaaaatgt ttaccaaattcaaataatgccacaaagctataccattacaaaataaccgtatcaccaccc acaaatttcctaacaaaaacgccaacaatgattaagcatgacgaacacgaatttctattt gaaggattttctctactttcacaccaaccgcttggcgagtttcccgattgtacggtcatt cgtttcaatatagaatacaaaattatgtattttgaagagaaaatgccggaaaattttaca atacaagaattggatttgtttactgaatatttattcggtgaaattcttgaaatgacagat ttttccgtcttaccgaaacaaaacgatgatacatgttcgctgtttcatttttttccgcga tttgtacgtgccatacccgataatggcaaagaaattctatcaatgagcgttgttctaaaa tatttactcgacaattctggtccacttgtcgatggatcaattcttaaagatatggataag gtgcatcaacgtgagtggcaagaatatgtagatgaagtaaagggtatggttgtgacgaat cctggaatgaaaccgtgctcgatccgagtcgaccaattggatcggaatgttggcgattta ccgaactgtgtcgatccggaagatgccaatattgtgcatccggtgattgtacactttgct gttcgtccaccacaattgagctatgctggcaattcggaatatcaaaagtcatggcgtgaa tatgttaaatttcgacatttagtggccaatatgtcgaaaccatcgtacgaagacaaacga aagttggaggcgaaagagagtcgactacaagaaatgcgaaccgaaggccgttttaaacga aatattccggttgatatttcttcaaaaggtttttatcgtactggaatcatgtgcgatatt gttcaacatgcactcttaatacccgtactaaccacacatcttcggttccatcaatcgctt aatttgctggagaataacatacaatacaaattcaaaaatcgttatctattgcaattggcc ttaacacatccatcttataaggagaatttcggtacaaatccagaccatgcgcgaaatagt ttatcaaattgcggcattcggcagcccgaatatggagataggaaaattcactatttacat gcaagaaaacgcggcataaacacactcatcaatattatgtcattgtttggaaaagaaaat gcaaccgaaagcagcataacacataatgaacgtttggaatttctcggcgatgcagttgtt gaatttataacatccgttcatttatttcttatgtttcccgatcttgaagaaggtggactg gccacttatcgtgctgctatcgtacaaaatcaacatttagctgttttagcaaagaaattg cgattggatgagtttatgctgtatgcgcacggctcggatttgtgtcatgaattagaattg agacatgcgatggccaattgttttgaagcatttatgggcgcgctgcatttagatggaggc atcgaagtggccgacaaagtgtttggaactacactgttccttgagaacgacacactcaaa agggtttgggttaatttaccacaacatccgctgcaagagcaggaaccattgggagatcga caatggatcaaagattatccattgcttcaaagtttagttaaattcgaagatacgattggc gccaagtttcatcacattcgtttattggcacgagcatttacagatcgtagcattggttat actcatttaaccatgggctccaatcagcgtcttgaattcctcggtgatactgtgctacaa ttaatttgttccgaattcttatatcgacattttcccgaacatcacgaaggacatttatca ttgttgcgaagttccctagtcaataatcgaacgcaagcggttgtttgtgatgatttgggt atgactgagtatgcgatatatgcaaatccaaaaactgaattgaaaacaaaagacagagct gatttgttggaagcatttttgggtgcattgtatgtggacaaaggtcttgcatatcccgaa gtattttgtcaagtttgtctatttcctcgactacaaatgttcattatgaaccaagactgg aacgattcaaaatcaaaattgcagcaatgttgcttgacgcttcgtacaatggatggtggt gagcccgacattccagtttataaggtgattgaatgtaccggaccaacaaatactcgtgta tataaagtggccgtttacttcagaggcaaacgcttggccagttcatcgggacattcaata caacaagccgaaatggaagcagcaaaaacagcattagaaaattcatcggcactatttcca cagttggactatcaaaaacgcgtaatagcaaacagtatgaaacgacaaaaaggcaaaccc tatacgagggaacaaaaacgcaatcgcacagaattgcaaaaaattgcaaaaaaaattgcc gaggatgattcacatttaccgaaacaatatcgtattaatgagaaatcaaataaacaatca tcagatgaatcaaactcacttaaatccgattctgatggaaaatattcggattcatcgcat cttagttgttcgaccaacaagactaagcgaacaaaacaaaagaaaaaacacaaacaccga aaaaagaatcgtgcaaatgatgaagatgaaccacatttgaaatgcaaggatgaaaataag caagaactccaaagtatgcaagaaaaactggaaacacaaatcaacgaaacaaacgcgaat acaattcaagattttaccaaacacaatgacgtagaagacgacttggcaatagaaaattat cattcggatgaatcagacacgtttaaatccgattccgatgcaaaatattcggattcatct cattttagttgctccagcaggagtgagcgtataaaacacaagaaaaaactcacataccga atgaaagatcatgcaagagatgacagcgatgagtcacatttgacatgcaaaaatgaaaat aaccaagagctccaaaatatgcaagaaagactagatgtacaaatgtacgaatcaaacgcg aatacaacggaacatttaaccaaacaaaatgaagtagaatacgacttagagatagaaaca attgattctggtgatgatattgcttctttagaatctggggaaatctcataa

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