Contarinia nasturtii (swede midge): 116338697
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Entry
116338697 CDS
T08003
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116338697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cns03009
]
116338697
Ribosome biogenesis [BR:
cns03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
116338697
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_14
AAA_33
Mg_chelatase
AAA_2
TIP49
nSTAND3
AAA_28
ABC_tran
RNA_helicase
NPHP3_N
AAA_17
AAA_18
IstB_IS21
ATPase
Sigma54_activ_2
NACHT
TsaE
Parvo_NS1
Rad17
Cytidylate_kin2
Vps4_C
NB-ARC
Motif
Other DBs
NCBI-GeneID:
116338697
NCBI-ProteinID:
XP_031619972
LinkDB
All DBs
Position
Unknown
AA seq
960 aa
AA seq
DB search
MDPRRQMPKSISISDPLIIPRVKQYLEENVHQTYVDVGVMARHLQEKYREYGRRKSQPFR
FLVDQAYKTVLHSYGLDSNPSTEEEENSDLELMEDQPTQSNHMNNMLNDMYRANTNESRT
PTTQNEFPIDISSDESDVEDSLPKNTNNGHSSKEFPKIPKDIVLGSITKSTAAAETLAGI
REESLKSKSALSVTAPSTALSPVTITKKRKLEAISFDTGTDRNWQPPSRQISKKFKKEFP
AKKSEYTFESIGGVNKILKELCELLLHINNPDIYKCIGLPAPHGFLLFGPPGSGKTLLAE
AIAGQLKVDIIQVAGTELVSGVSGESEERIRELFEQAAMCSPCVLFIDEIDSITSDRKHA
SKDMERRIVAQLISCLDDLPKMPGGEQVVVIGATNNADGLDPGLRRVGRFDQEICLGIPD
RDARCEILRIICRNLRLESFFDYDLIASLTPGFVGADLLALATRAGLLAVKKVLHDKQDQ
ALKGNKVNKPNPAVTAELNLDMHDEINEDGMFMQIDHESPQKSDEDLNISPQQKAENQEN
QNKKDVPEANTESSENQTESSPKIDETNIKTDEIAKNVDDSKPNDTEVSPTVKASGSTDI
LIVTETSTNETLGEALLKNDTIKDRMGLDVMFKWLSHQENLVTPEDLNDLYITVDNFKEA
VKLIQPSAKREGFITVPDVTWDDIGSLRDIREELNLAIMAPVKFPNRLKVLGINAPSGVL
LCGPPGCGKTLLAKAIANEAGINFISVKGPELLNMYVGESERAVRQCFQRGRNSAPCVIF
FDEFDALCPKRGGSNDSQAGTRVVNQLLTEMDGVEERKGVFIMAASNRPDMIDPAVLRPG
RLDKILYVGLPQKQDRLEILQAQTKQGKQPVLAADVDLEELAELTDSFTGADLAGLVRQA
SLQALRDTLKIETTPESEIDLSVHKQHFLMALQNLRPSVSTEDKVQYEALRLKYASPSKK
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atggatccacgacgccaaatgccaaaatcaatatccatttcggatcctttgatcattcca
cgtgtaaaacagtatttagaggaaaatgtccatcaaacgtatgtagatgttggtgttatg
gcacgtcatttacaagaaaaataccgcgaatatggacgtcgaaaaagtcaaccgtttcga
tttttagttgatcaagcttacaaaacagtgttgcacagttatggtttggacagtaatcca
tccacagaagaagaagaaaattcagatttggagctcatggaggatcagccgacgcaaagt
aatcatatgaacaatatgctaaatgacatgtatcgtgcgaatacgaatgaatcacgaaca
ccgaccacacaaaatgaatttcccatcgacataagcagcgacgaaagtgatgtcgaagac
tcacttccgaagaacacaaataacggtcattcgtccaaggaatttccaaaaatcccaaag
gatattgtactcggatcgataacaaaaagtacagcggcagcagaaacattggctggtatt
cgagaagagagtttgaaatcaaaaagtgccctatcggtgacagcgccatcgacagcattg
tccccagttacaataacgaaaaaacggaagcttgaagcaatttcatttgacaccggaacg
gatcgaaactggcaaccaccaagtcggcaaatttcgaaaaaattcaaaaaagaatttccc
gccaaaaaatccgaatacacatttgaaagcatcggtggtgttaataaaatactcaaggag
ctatgtgaattactgctgcatatcaacaatccggacatttacaaatgtattggacttccc
gctccacatggtttcttattatttggaccacccggatctggcaaaacattactcgctgaa
gctattgctgggcaactaaaagttgacataattcaagtagctggcacagagcttgtgtcc
ggcgtgtctggtgaatccgaagaacgaattcgtgaattattcgaacaagcagcaatgtgt
tctccatgtgtgctgttcattgatgaaatcgatagcatcacatcagatcgaaaacatgca
tcaaaagacatggaacgtcgcattgtggcacagttgatatcatgcttggatgatttaccg
aaaatgcctggaggtgaacaagttgttgtaattggagcaacaaataatgcagacggtttg
gatccaggattgcgacgagttggtcgttttgatcaggaaatttgtttaggtataccagat
cgtgatgcacgctgcgaaattttacggattatttgtcgaaatcttcgactggaatcattc
tttgactacgatctgattgcatcgttgacacccggttttgttggtgctgatcttctggca
ttggcaacacgagccggattactagccgtcaagaaggtgttacatgacaaacaagatcaa
gctctgaaaggtaataaagtaaataagccaaatccagccgtcacagctgaattaaatctt
gatatgcatgacgaaataaatgaagatggaatgttcatgcaaattgaccatgaatcacca
caaaagagtgatgaagacttgaatatttcgccacaacaaaaagctgaaaatcaagaaaat
caaaataaaaaagatgtacctgaagcaaatacagaatcatctgaaaatcaaaccgaatca
tcgcccaaaatcgatgaaacaaatataaaaaccgatgaaatcgctaaaaatgttgatgat
tcaaagccgaatgacacagaagtcagtccaacggttaaagcaagcggaagcactgatatt
ttaattgttactgaaacaagtacaaatgaaacgcttggtgaggcgttacttaaaaatgac
accatcaaagatcgaatgggtctcgatgttatgtttaaatggcttagccatcaagaaaat
ctagttaccccagaagatttgaatgacttatatataacagtagataatttcaaagaagcc
gttaaattgattcaaccgtccgccaaacgtgaaggttttatcactgtaccagatgtgaca
tgggatgacattggttcacttcgagacatacgcgaagaattaaatctggctattatggca
ccggtcaaatttccaaatcgtctcaaagtattgggtattaatgcaccatctggcgttctt
ctctgtggtccaccgggatgtggtaaaacattgttggcgaaggcaattgccaatgaagcc
ggtataaatttcatctcggttaaaggtcccgaattattgaacatgtatgtgggagagagt
gaacgtgcggtacggcaatgtttccagcgtggtcgtaattcagcaccgtgcgtaatattt
ttcgatgaatttgatgcattgtgtccgaaacgaggtggttcaaatgacagccaagctggt
acacgtgtcgttaatcaattgctcactgaaatggatggcgttgaagagcgtaaaggcgtt
ttcataatggccgcctcaaatcgtcccgatatgattgatccagccgttcttcgaccggga
cgtcttgataaaattctttatgttggtctaccgcagaagcaagaccgattggaaattctt
caagctcagacaaaacaaggaaaacaaccagttttagcagccgatgttgatttggaggaa
cttgctgaactcacagactcattcacaggcgctgatcttgccgggcttgtacgacaagca
tctttacaggcacttcgggatacactcaaaattgaaacaacacccgaatcggaaatcgac
ttaagtgtacacaaacaacactttttaatggccttgcaaaatttgcgtccatcagtttca
acagaggataaagttcaatatgaagcgctgcgattgaaatatgcatctccatcgaagaaa
tag
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integrated database retrieval system
