Contarinia nasturtii (swede midge): 116338911
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Entry
116338911 CDS
T08003
Name
(RefSeq) ribosome biogenesis protein BMS1 homolog isoform X1
KO
K14569
ribosome biogenesis protein BMS1
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116338911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cns03009
]
116338911
Ribosome biogenesis [BR:
cns03009
]
Eukaryotic type
90S particles
GTPase
116338911
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
Tsr1_G-like
MMR_HSR1
GTP_EFTU
AAA_22
RNA_helicase
FeoB_N
NTPase_1
AAA
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
116338911
NCBI-ProteinID:
XP_031620329
LinkDB
All DBs
Position
Unknown
AA seq
1167 aa
AA seq
DB search
MADIESDKKKEHRKKQSGVSAEKKKAKTKQKDETLTARQRNPKAFAIQSVVRAERNFRRG
EDLTAKKQHIPLVDKSSNDVPPILIAVVGPPKVGKSTLINNLIRSFTRTNVTNIEGPITI
VTSKKRRITLIECKNDINAMIDIAKCADLVLLMIDASFGFEMEIFEFLNICQVHGMPKIM
GILTHLDAIKNAKTLKRRKKELKHRFWTEVFDGAKLFYLSGILHGEYLRNEVKNLSRFIS
VMKFRPLTWRGTHSYILADRMEDVTNTEEIRLNAKCNREVILYGYVRGVPMTKENMVHIA
GLGDMRVHEMSTLPDPCPLPTGEKKRNLMEKERLLYAPMSGVGGIVYDKDAVYIELQGSH
SHKKEANTEQEEIVQDLIGKKETFDTQIDSQEFRLFSDGALIKSKEFQDNNKIDSDDDND
SESDADSDEDSGVDEEDSEAEQNGLGWQGESDDEEDPDENADSSDDDEYQFSDKLDKDRT
DDVNERDEDIDEEMDAVESGINWRDNLAQKARFAYLERQSNSQNLMKIVYGAINAEKRKV
QQGDENDSDEEDKIGGMFNVVANKQADLHSEKENRDAFESCFFEEYGADTRDWSIDENKH
LIKDCFVTGKWRESEDAQELLRLDDLSDDDSEIYGDFEDLETGEKHKGKKNVKAQADDDN
ESDDDDDADKLPENEQSRKRKMTRVEESNLTKTELMAKKMKLKAQFDSEYDNKDDGRIKG
DHQYYEELKAAANRQSELNKKEFENLDDDLRVQIEGFRSGLYVRLAFKNVPCEFVENFDA
TYPILIGGLNMSEENVGYVNCKVKKHRWYKKLLKTTDPLILSLGWRRFQTIPIFAKVEDD
MKHRYLKYTPNHVTCSMTFYGPITPQNTGFLAIQKIQQNTDQMRRIGFRIAATGCVTEVD
KSTQIMKKLKLVGTPFKIFKKSAFIKGMFNSNLEVAKFEGAKIKTVSGIRGQIKKANQTP
EGSYRATFEDKILLSDIVFCRTWFKVDVPKFYAPVTNLMLPPSEKNQWIGMKTVGELKRE
KNIKAKPNSDSLYTKIVRPPKQFYPLHIPRALQKSLPYKDRPKLGPVDPKKPIDSNRIAV
IHSPHEQRVANMMKMIKTNFDAKKEKTKKETEMRVKKFKDAKLADEMRRLKRQKELRKKI
CRTISRMETSKAAGKDGGGGKRKHFKK
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggccgatattgaaagtgacaagaaaaaggagcaccgaaagaaacaatccggtgtgagc
gctgagaagaaaaaagccaaaacgaaacaaaaagatgaaacacttacagctcggcagaga
aatccaaaggcatttgcaattcaatcggttgttcgggctgaacgaaattttcgtcgcggt
gaagatttaacagccaaaaagcaacacataccacttgttgacaaatcatcgaatgatgta
ccgccgattttaatcgctgttgttggtccaccaaaagttggtaaatcaacattgattaac
aatttaattcgcagttttacccgcacaaatgtgacaaatattgagggccccattacgatt
gtgacatcgaagaaacgacgaattacattgattgaatgtaagaacgatatcaatgctatg
atcgatattgcaaaatgtgccgatttggtgttgctcatgattgacgcatcgtttggattt
gaaatggaaattttcgaatttcttaatatttgccaagtgcacggaatgccaaagattatg
ggcattttaacgcatttagatgcaatcaaaaatgcaaagacattaaaacgtcgaaaaaag
gagttgaaacatcggttttggactgaagtattcgatggtgcaaaattgttttatttgtcg
ggcattctgcatggcgaatacctacgaaatgaagttaaaaatttaagtcgtttcatatcg
gtgatgaaatttagaccacttacttggcgcggaacacacagttacattttggccgatcgt
atggaagatgttacaaatacagaagagattcgtttgaatgccaaatgcaatcgcgaagtt
attctctatggttatgttcgcggggtgccaatgactaaagaaaatatggttcatattgcc
ggtttgggtgatatgagagtgcatgaaatgagcacattaccggatccatgtccgttgcca
acgggagaaaagaaacgaaatcttatggaaaaagagcgtttgctgtatgccccaatgtcc
ggtgtgggtggaattgtttacgataaagatgcggtttatattgaattgcaaggttcacat
agccataaaaaggaagcaaataccgaacaggaagaaatcgtccaagatttgatcggaaag
aaagaaacattcgatacacaaattgacagtcaagagtttcggctgttcagtgatggtgcc
cttattaaatcgaaagaatttcaagataacaacaaaatcgattcggacgatgataacgat
tcagaaagtgatgcagatagcgatgaagactctggtgtcgacgaagaagatagcgaagcg
gaacagaatggcctgggatggcaaggagaaagtgatgacgaagaagatccagatgaaaat
gcagatagttcggacgatgatgaataccaattttctgataagctagataaagatcgcacc
gacgatgtgaatgaaagagatgaagatatcgatgaagaaatggatgcagtcgaaagtggc
attaattggagagataatctagcacaaaaagctcgattcgcatatttggagaggcaatca
aattcacagaatcttatgaaaatcgtctatggtgccataaatgcggaaaaacgaaaagtg
caacaaggagacgaaaatgattccgatgaagaggacaaaatcggtggaatgttcaatgtt
gtagcaaacaaacaggctgacttgcacagcgaaaaagaaaatcgcgatgcattcgaatca
tgtttcttcgaagaatacggcgcagatacaagggattggagcattgatgaaaataaacac
cttatcaaagattgtttcgtaacgggaaaatggagagaatcagaggatgctcaagagctg
ttgcgtttagacgatttaagtgatgatgatagtgaaatctacggtgattttgaggattta
gaaacgggtgaaaagcacaaaggcaaaaaaaatgtcaaggctcaagctgacgacgataac
gagtctgatgatgacgacgatgctgacaaattgcccgaaaatgagcaatcacgaaaacgt
aaaatgacccgtgttgaagagtcaaatttaacaaaaaccgaattaatggcgaaaaagatg
aaattgaaggcacaatttgattctgaatacgataataaagatgatggtcgaatcaaaggc
gatcatcaatattatgaagaattaaaagcagcagccaatcgtcaatccgaattgaataaa
aaagaatttgaaaatttggatgatgatttgcgtgttcaaattgaaggttttcgatctggc
ctttacgttcgattggcatttaaaaatgttccatgtgaatttgtcgagaattttgatgcc
acctatccgattctaattggcggcttaaatatgtccgaagaaaatgtcggctatgttaac
tgcaaagtaaaaaaacatcgttggtataaaaaattattaaaaaccaccgatccattgatt
ttgtcattgggttggcgccgtttccagacaataccgatttttgcaaaggtcgaagatgat
atgaaacatcgttatctaaagtatacaccaaatcatgttacgtgcagcatgaccttctac
ggaccaatcacaccacaaaatactggattcttggcgattcagaaaatccaacagaatacc
gatcaaatgcgtcgcattggttttcgaattgctgccactggctgtgtcaccgaagtagac
aaatccacacaaattatgaaaaaactcaaattagtcggaacaccgtttaaaatatttaaa
aaatcagcatttatcaagggaatgttcaacagtaatttagaagtggccaaatttgaaggt
gccaaaataaagactgtatctggaatacgtggtcaaattaagaaagcaaatcaaacaccc
gaaggatcatatcgtgcaacatttgaagataagattttattaagtgatatcgttttctgt
agaacttggtttaaagtcgatgtgccgaaattctatgcaccggttacgaatttgatgtta
ccaccaagcgaaaagaaccaatggattggaatgaaaactgtcggtgaattgaagcgtgaa
aagaatattaaagccaaaccaaattcagatagtttatatacgaaaatcgttcgaccaccc
aagcaattctatccattgcatattccaagagcattacaaaaatcattgccgtataaagat
cgaccgaaattgggtccagttgatccaaagaaaccgatcgatagtaatcgtattgcggtc
attcattcgccgcatgagcaacgtgttgcaaatatgatgaaaatgatcaagacaaacttt
gacgcaaagaaagaaaaaacgaaaaaagaaaccgaaatgcgagttaagaaattcaaagat
gccaaattggccgatgaaatgcgtcgactcaaacgacaaaaagaattacgtaaaaagatt
tgccgaacaattagcagaatggaaacatcgaaagcagctggcaaagatggaggtggagga
aaacgaaaacactttaagaaataa
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