Contarinia nasturtii (swede midge): 116338922
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Entry
116338922 CDS
T08003
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cns04131
]
116338922
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cns04812
]
116338922
Enzymes [BR:
cns01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
116338922
Membrane trafficking [BR:
cns04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
116338922
Cytoskeleton proteins [BR:
cns04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
116338922
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
MIT
TIP49
AAA_16
AAA_22
AAA_5
AAA_14
NPHP3_N
IstB_IS21
PhoH
DUF815
Mg_chelatase
nSTAND3
NACHT
Bac_DnaA
Motif
Other DBs
NCBI-GeneID:
116338922
NCBI-ProteinID:
XP_031620354
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MVRSEKEKSQSNNGKKPTKSSDCENEYMTTSESDSPTTETGRDSVHQQNLYIVSFPIIIL
FNILRSILYQIFIIFKYIFNVSSHYMPLRKRQTPNNIQVCVNHSEEKVQELNSQVNDSIG
MTSSRPSHHQISGPGPGDPLLAKQKHHHRRAFEYISKALKIDEENEGQKEVAIELYRKGI
RELELGIAVDCWGGRGEIYERAQRLHDKMQTNLSMARDRLHFLASGQKLIVVNKKSSGGL
TNKSQTLPRSMGSRVPSLSDGRPQRLPTKPATTPPVIRRQFSITGSPIHKPTTGRSTPPL
RSRSGTVTPTSNNAGVGIAPQIIQVKGVDNKLVQIIMDEIVEGGAKVRWSDIAGQEVAKQ
ALQEMVILPAVRPELFTGLRSPAKGLLLFGPAGNGKTLLARAIATECSATFFNISAASLT
SKYVGDGEKLVRALFSVARKLQPSIIFIDEIDSLLSERNSSEHEASRRLKTEFLVEFDGL
GSQENDRIVVLGATNRPQELDEAALRRFTKRVYVTLPDAHTRQHLIRSLLAKQGCQLSDD
IIQNLAVYTDGYSGSDLTALAKDAALEPIRGIDVEQVRNVNLKEIRPINEQDFINSLKRI
RRSVAPQSIIAYEKWARDYGDVTY
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgttcggagaaagaaaaatctcaatcgaataatggtaaaaaaccaacaaaatca
tccgattgtgaaaatgaatacatgaccacatcggaatcagactcaccgacgactgaaacg
ggccgtgactcagtgcatcaacaaaatttatacattgtttcatttccaattataatttta
tttaacattttacgttcgattttatatcaaatttttatcatttttaaatatattttcaat
gttagttcacattatatgccgctacgaaaacggcaaaccccgaataatattcaagtttgt
gtgaatcatagtgaagaaaaagttcaagaattgaacagtcaagtaaatgacagcatcggt
atgacatcgtcacgtccatcacatcatcaaatttctggccctggtcctggcgatccgttg
cttgccaaacagaagcaccatcatcgacgtgcatttgaatatatttcaaaagcgctcaaa
attgacgaagaaaatgaaggacaaaaagaagttgccatcgaattgtatagaaaaggaatt
cgtgaattggaactcggaatcgctgtagactgttggggtggacgtggtgaaatttatgaa
agagcacaacgattgcacgataaaatgcagaccaatttatcgatggctagagatagatta
cactttttagcctcaggacaaaaacttatcgtagtaaataaaaagagtagtggaggtttg
accaataaatctcaaacactacccagaagcatgggatcacgtgtaccctccctatccgat
ggacgacctcaacggcttcccaccaaaccagcaacaacaccgccagtcattcgcagacaa
ttttcgataactggttcaccaatacacaaaccaacaactggtcgcagtacaccaccgtta
cgttcacgatctggaacagtgacaccaacatcgaataatgctggtgttggaatcgcccca
caaataatacaggtcaaaggagtcgacaacaagctagttcaaatcattatggacgaaatt
gtcgagggtggtgctaaagttagatggagtgatattgctggtcaagaggtggcaaaacaa
gcccttcaagaaatggttatactgcctgctgttcgtccagaactatttacggggcttcgt
tcgccagccaaaggcctgcttttgtttggtccggctggtaatggcaaaacattattggca
cgtgcaattgctactgagtgttcagcaacattttttaatatatcggctgcatcgctaaca
agtaaatatgtgggtgatggtgaaaaattggtgcgtgcactattttcagttgcacgaaaa
ttgcagccatccatcatatttattgatgaaatcgattcattgctatcggaacgaaattcg
agcgagcatgaagcgtcgcgtcgcctaaaaaccgaatttcttgttgaatttgatggactg
ggtagtcaagagaatgatcgaattgtggtccttggagccacaaatcgaccccaagaattg
gatgaagcagcgctacgtcgattcacaaaacgtgtctatgttacattacccgatgcacac
acccgacaacatttgattcgaagtctgttagcaaaacaaggctgtcaattgtccgacgat
attattcaaaatttggccgtctataccgacggttattctggatcagatctcacagcatta
gccaaagatgccgctttggaacccattcgaggaatcgatgtggaacaagtgagaaatgta
aatcttaaggaaattcggccgataaatgaacaagattttataaattcattgaaacgaata
cgacgttctgttgcaccacaaagtattatcgcttatgaaaaatgggccagagactatggt
gatgtaacctattag
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