Contarinia nasturtii (swede midge): 116339113
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Entry
116339113 CDS
T08003
Name
(RefSeq) U3 small nucleolar RNA-associated protein 6 homolog
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116339113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cns03009
]
116339113
Ribosome biogenesis [BR:
cns03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
116339113
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP6_C
HAT_PRP39_N
U3_assoc_6
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
Suf
NRDE-2
TPR_19
DUF4996
TPR_15
Motif
Other DBs
NCBI-GeneID:
116339113
NCBI-ProteinID:
XP_031620644
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MAEFVEYRMECALPEYEQMRILNLFTHEEILKMKKARETFEYRCTQPSRDIKDFVEYIKY
ERSLIGLTKQRTKLHKLTKNHTITTLIANRMKQLYAQALSRFPHNLRFWDEYIKFLQQFK
YTKDIPATFDQILKFHSDKADVWIRSILWEYNENYNDERVRGLLLRAQQLHPESQKLYLT
FFQIELENKRQSDENLALQHAKTVYTNGQKILKNCQFYIEILKIVDRFAYATSIQQLILH
DLRELFQNEEIMWHNLAQRELNGLPTDKFIERIKQDHEDELNNEDSLSITQQHTSLRKRI
ESCVEIYEEAVKVVNTAKMWNYYINAMLELNKDLSSLIGVKRFSLSRAFAGGNNSNHMSE
NHYLQYIELLYSNNPTDENIEQVFQKAIKIYNNSQNIWLQYLRYYIQENKLNKVKEVFRS
AKNRLDSKSSDIWELYLNYLKYLHSYSKEANTEFEHMIRDVAAQPYNSFNILKAHILELI
ATTVGIKRARKTYELFIKHVPGCYEVHNMMADLEAKQLQRDVESERNCLELMTFNFGKTR
PDVWLRYMRFERNVGEAKNVSRLHQRAISSLKSEFLDQFSAMFNFFSNGDF
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggccgagttcgttgaatatcgcatggaatgtgctttgccagaatatgagcaaatgcga
atacttaatttatttacacacgaggaaattttaaaaatgaaaaaggctcgtgaaacgttt
gaatatcgttgcacgcaaccatctagagacataaaggattttgtggagtatataaagtat
gagcgaagtttgattggcttgacaaaacagagaactaagctacataaattaaccaaaaat
catacaattacaactctaattgcgaatcgtatgaaacagctgtacgctcaagctctatca
aggtttccgcataatcttcgtttctgggacgaatacatcaagttcttgcaacaatttaag
tacacaaaagacataccggctacatttgatcaaatattaaaatttcacagtgataaagct
gatgtttggattcgttccattttatgggaatacaatgagaattataatgatgagcgtgta
aggggtcttttactgcgggctcagcaacttcatcccgaatcgcagaaattgtatttgacc
ttctttcaaattgaattggagaacaaacgtcagtcagatgaaaatttggctctacaacac
gccaaaactgtttacacaaacggacagaaaatattgaaaaattgtcaattttacatagaa
atattgaaaattgttgatagatttgcctacgcaacttcaattcaacaattaatattgcat
gatttacgagaactatttcaaaacgaggaaataatgtggcacaatttggcacaacgtgaa
ttgaatggattgccaacagacaaatttattgaacgcatcaagcaagaccatgaagatgaa
ttgaataacgaagattcactgagcattacacagcaacatacatcattgcgaaaacgaatc
gaatcgtgtgttgaaatttatgaagaagccgttaaagtggttaatacagcaaaaatgtgg
aactattacataaacgccatgctcgaattgaataaagatttatcgtcattaataggggta
aaacgattttcattgagtcgagcatttgcaggtggaaacaattcaaatcacatgtctgaa
aatcactatctacaatatattgaattgctgtattcaaacaatccgacggatgaaaatatc
gaacaagtttttcaaaaagcgataaaaatctacaataattcgcaaaatatttggcttcaa
tatttacgctattatattcaagaaaataaactgaataaagttaaggaggtattcagaagt
gccaaaaatcgactcgactccaagagctccgatatatgggaattgtatttgaattacttg
aaatatttgcatagctatagcaaagaggcaaataccgaatttgaacacatgattcgggac
gtagcagctcaaccctataacagctttaacattttgaaggcgcatattttagagttgatt
gcaacaacggtgggcataaaacgggctcggaaaacttacgaattattcataaaacatgtt
cccggctgctatgaagtacataatatgatggctgacttagaagcaaaacagttgcaacga
gacgtggaatctgaaagaaattgcttggaactgatgactttcaactttggaaaaacaaga
ccagatgtctggcttcggtatatgcgatttgagcgaaatgttggtgaagccaaaaatgtg
agccgattacatcaaagggcaataagttctcttaagtcagaatttttagatcagtttagt
gcgatgttcaactttttctcaaacggagacttttaa
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