Contarinia nasturtii (swede midge): 116339202
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Entry
116339202 CDS
T08003
Name
(RefSeq) PHD finger protein rhinoceros isoform X1
KO
K22156
protein Jade-3
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cns03036
]
116339202
Chromosome and associated proteins [BR:
cns03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
HBO1 complex
116339202
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H_2
zf-HC5HC2H
PHD_2
EPL1
PHD
C1_1
Motif
Other DBs
NCBI-GeneID:
116339202
NCBI-ProteinID:
XP_031620787
LinkDB
All DBs
Position
Unknown
AA seq
3044 aa
AA seq
DB search
MSQRGKRQSRLDNDDPPPTKKRKGRPPANKSNSANLGNGNSMHPNIESPQNGSTMSPSTT
TSSAWQARSLSDLKLSTIYNRSAAEPPAELFRKDLISAMKLPDSEPLASDEYWVITDQWK
QEWERGVQVPVSPDSLPEPTVLAKQQESFYTGRQDFKLPKNKFIRITKDENFSSDLHYLS
NTPAMAKASCSYDLDPVDEAWLNILNGERTMAGHSAVTEEQFERVIEELEIVCWDKIQAI
IKTEEGLGIEYDENVICDVCRSPDSEEANEMVFCDSCNICVHQACYGITTIPSGQWLCRT
CSMGQRPDCVLCPNKGGAMKSARSGQKWAHVSCALWIPEVSIGSVDRMEPITKISSIPQS
RWALICVLCRERVGACIQCSVKPCKTAYHVTCAFQHGLEMRAIIEDENAEDGVKLKSYCL
KHSVNKNNSKKKEKCITHSNTGGSGTEDDDTNKRKKRKDMTTEERNMARAKRLQEIEAEF
DKHVSIKDINCTILEVDQEAINYVYNYWILKRKAANNRPLLPPKSEDADMIAHKQEQADN
EKMKMFVHLRQDLERVRNLCYMVSRREKLSRSFFKMREQTFYRQTSVLDELNTKNIDNSL
LTAIVEANHGPSMYDRLYSSESIGANISINLEEMISTLTGALSTKSTSTTTPASGKTQNE
NNQKRSQKTDLNGINKVKKNAQKNQYADNHFNRMYINGTSTDKPSSKIYDSSLSSSSESA
QGLRSSSEDNIQSHSRRRNVSPNKKKSVLSVRPFETRVSTEKKKRRTSTTLAMRKQKSFE
SSSEDDEEQKVRSRRRSKDFGSSADTDTNSRTSEKRSPKSRLLRQMERELAKEKLSGSES
DELVPICSSIGASGSLNSNFAKKLSASIYSDSDSTDKDKTDNTASDSQNHTFRTKAAVKE
FNSHHNSATAKTRNIKDSISMTTNETKEKARLEIEKDRLHDCLEQGQSKGRKERAQKERQ
DKTGKLLKEKTREKLEKERLQYEKVEKEKLAKIEHDRIQKEAAEKERIERLQDNKFDKLS
KEKKKRKDVSKEFPTDLLVVPQRQAAKKASENMMRTQVIGSKKEQTKDEDKKELQKELSK
NKDRQDLSKDSGKEIAMKQKNKVSKATNNKSMTLIELTSPLAEPLKEKDIKSKKAEKLDK
DIIVAYVPQRQAAKKAAEHIKGLGKVVTSDATSTVTLSEDKPLSLTPSTKSIPPSIPNKS
NILSSPKLSSSSSSSSSSSSSSGSTGSSSSSSDSDDDSEGDKKGSPFLNKGSKSSSTASS
DESSSSDSESSESSSDDETSHSAPRKNSVVTPAKPKSTNMSNKRKDTIDKKANSAVLPAS
PKREESIRSPTSKAFGRTGKGLPNDRHECSDNQSGTLVKSSIKSTLSPTKTAPKNEKSFR
RIIEEKQSRITTNSLPEKPAKLPDLATIAKSTTRKRKSSLLEERLQQENKVSVGNKTKNE
PKSITSSSSPAQSPPQTNSKSTKSQSVESAKSMSSENRPTIEKSSKSCELSPTKWETNER
LRTIEPKPLVQSLEQEINERKAECQSISTSIGNKSKLSDALDKLFCKQKEKEQQQQQQQQ
QQQQQQQQQQQQQSDEEQQEKEEQEQQQQKSLQKLDNQIKRLSHSLEVNKSTVDMDIEPK
VSIVQDEIIEIVKETKNECPVQNETQNQNLVKLDKLTQSDQANECDQVEQQLQPSATNKY
EQEQFVNNMPKPPTPKSSLIFSPPPTSLTIDKREASIFDFADNFTIPNDSAVSLLSFNSD
NLFKEDSAKETMDLVANLRQNIKKGGKGDECCKAKPQCISHVQSIEPEIPHDSCTTTNND
PNRSIGIKAKSMAQPTIVIDLDQENSSDERKLPSSNVSTIETSKPSTIDSNIIQQTSTQP
IEKDQHENKSASTNTVTSPLQLQTEVEQIASKMLNVLPSPADILMESEMNESQSINTFHM
QPYTRCSTLNGNKETFNHSLQIHHGKTQLNVKNDEVTIRHRSELMGDIDENEGYMRNKWS
EQEMIQTRRSVSSSPSSESENNDVQEENKQEQELKAQPHKVNDANLQSSNELGMPNTIAF
RANELVINENIQDMLSFSSQPHPTGHQFNIPNENGPVSLFPSSGGSLNTQIPFPSPGAAM
FPPTFVNAFTSAATSQPTSKNMETLTPNSAINTSMNYPSNLCAAFTSSSRNIAITTSMIA
PSPVQSDASSVVPPKGNDLKSISQSSILASPPPPQPHTLGNNNNNIISNKLELNRVPPVQ
PVLSPQTSTSETRQCQKQSLGQSRTPQSQILPDSVHYSLENMPNDLTSNMDRNISGEQSS
KRPTRFNTQLVQTTLKSPSKSPGKSPRQMEIVRRKSESSRGRSRGARNSTVGRGSTARIS
SSTTRGRGRGRAPLVVPMAIPNTLFDLNNHIGSGTIHNKLQGTVYDLDFDEDLKCNDNVE
NLKSMRERRRSIDYRHQSDSFRSRDASESPKFSTASNNQKNAGEKSIPAWRADVRDLRPP
SPHDVNSVISMQNTPSMVHAAPPIPTIEPVMPGPVDMRTYNSGFDASNNDVFNSSNMLGA
FASGLADQTLPDIDEELEKDFQSALKASNTKTSTIAGRNDETRTGVVELNFVPNENVARF
TSHVVDPIMIDPVMSLSLDNQLEETEPPKHSLIKLKIKGPHARPENYTSTVLTYQPNTTI
EQTIQGAPNNSIRRMRKKELLRQYWTQENMDDTNCTQQQDQAQNSTSAATNSGRSAGIPK
AVDSMSSIPTKDDYKDYTALDIKKRKVPANRELRQLDVPSYEEMPERRRSVCSNASNTSS
SNAGESSKRKTRTKQAVMTTPKLKIKLGPDVFEASGISSSGGGGNGGSARPPKKRLSNMT
IPSFEELRRESMNYRKQVISQFNDTAKPKKKDKSKREKGKHKKKKEKEKDKEKKPKVEIV
SNDMNPSKLIIRFAKRKAETSINNDSDDEPSTAASTTVASSSTNSSELSTAPIRLKLARS
SQGYVMAEPTASISNTKLSTTKDNNDLAKCQVVLTDFTKLCDAEKHAYTNLQLQPNGNLA
DRNLNNTSINTSTTNREVNQMDDHSSNNEQDSSLPIIPLNCEVR
NT seq
9135 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagcggggaaaacgacaaagtcgtttggacaacgatgatccgccgccgacaaaa
aaacgaaaaggacgtcctccagccaataaatctaattcagccaatttaggtaacggcaat
tcgatgcatcctaatatagagagtcctcaaaacggttcaacgatgtcaccatcaacaaca
acgtcatctgcatggcaagctcgatcattaagtgatctaaagttatcgactatatacaat
cgtagtgcagcagagccaccagctgagttatttcgaaaagatttaatcagtgccatgaaa
ttaccagattctgagccattggcctctgatgaatattgggtaattacagatcaatggaag
caagaatgggaacgcggagttcaagttccagttagtcctgattcattgccagaaccgaca
gtactagctaagcaacaagaatctttttatacaggtcgacaggatttcaaattacccaaa
aacaaattcatacgcataacgaaagatgaaaacttttcatcggatttacattatttatcc
aatacacccgcaatggcaaaagcatcatgctcatacgatctcgacccagttgatgaagca
tggttaaatatattgaatggagaacgcaccatggctggacattcagctgtgacagaagag
caatttgaacgcgttattgaggaactagagattgtgtgctgggataaaatccaggctatc
atcaaaactgaagaaggattgggcattgaatacgatgaaaatgtgatatgcgatgtatgt
cgctcgccagattcagaagaagcaaatgaaatggtgttctgtgatagttgtaacatttgt
gtacatcaggcttgctatggtattacaactataccatcaggtcaatggttgtgtcgtact
tgttctatgggtcaaagacctgactgtgtgttatgtccaaacaaaggtggcgctatgaaa
tcggctcgttcaggtcaaaaatgggcgcatgtctcatgtgcattatggataccggaagtg
agcataggctctgtagatcgaatggaaccaattacaaaaatctcaagcattccacaatca
cgatgggctctaatttgtgtattgtgtcgagaacgagtaggtgcatgcatccaatgctcc
gtaaaaccatgcaagaccgcatatcatgtaacgtgtgcatttcaacacgggctggaaatg
cgtgccattattgaagatgaaaatgctgaagatggtgttaaattaaaatcatactgttta
aagcatagcgtgaataagaacaatagcaaaaagaaggaaaaatgcataacacattcaaat
actggtggctcgggcacggaagatgatgatacaaacaaacgcaaaaagcgaaaggatatg
acaacagaagaacgaaatatggcacgtgccaaacggcttcaagaaatagaagccgaattt
gataaacatgttagcattaaagatattaactgcaccatccttgaagtggaccaagaagca
atcaactacgtatataattactggatattaaagcggaaagcagcaaacaatcgaccttta
ttaccaccaaagtcagaagatgctgatatgattgcccacaaacaagaacaggccgacaat
gaaaaaatgaaaatgtttgtacatttacgacaagatttggagagagtacgtaatttgtgc
tacatggtaagccgacgtgagaaactcagtcggtcgttctttaaaatgcgtgaacaaaca
ttttataggcaaacttctgtattagatgagttaaatacgaaaaatatagataattcactg
ctaacagcaattgttgaagccaatcatggtccttcaatgtatgatagactttattctagt
gaatcaattggtgcaaatatatcaataaatctcgaggaaatgatttcaacattgaccggc
gctctgtcaacaaaatcgacttcaacaacgacgcctgctagcggtaaaacacaaaatgaa
aacaaccaaaaacgatcgcaaaaaacggatcttaatggaattaacaaagtcaaaaagaac
gcacaaaagaatcagtatgcagacaatcatttcaatcgtatgtatataaacggtacatcg
acagataaaccttcatccaaaatatacgatagcagcttatcaagtagcagtgaatcagca
caagggctacggtcatcaagcgaagacaacattcaatcgcactcaaggcgaaggaatgtt
tctccaaataaaaagaagtctgtattatcagtccggccctttgaaacaagggtttcaaca
gagaaaaagaagcgtcgaacgagtaccacactcgccatgcgaaaacaaaaatcattcgag
agttccagtgaagatgatgaagagcaaaaggttcgctcaagaagacgatcgaaagatttt
ggttcgagcgctgacaccgatacaaactctaggacttcagagaaacggtctccaaaaagt
cgtttgttgcggcaaatggaaagagagcttgcaaaagaaaaactgtccggttctgagagt
gatgaacttgttccaatttgtagcagtattggcgcctctggttccttgaatagtaacttc
gctaaaaaactttcggcgtcgatttattccgacagcgatagcacggataaagataaaact
gataatacagcaagtgattctcaaaatcatacattccgaacaaaagcagctgttaaagag
ttcaattctcatcataattctgcaaccgctaaaactcgaaatattaaagatagcatcagt
atgacaacgaatgaaacgaaagaaaaggcacgactagaaattgaaaaagatcgacttcat
gactgccttgaacaaggtcaatcgaagggtcgtaaggaaagggcacaaaaagaacgacag
gataaaacaggcaaattattaaaagaaaaaactcgtgagaaattggaaaaagaacgactt
caatatgaaaaagtcgaaaaagaaaaattggccaaaattgagcacgatcgcattcaaaag
gaagcagccgagaaagaacgcattgaaagactgcaagataacaagtttgataaattatct
aaagaaaaaaagaaacgaaaagatgtatcgaaagaattcccaactgatttgcttgttgta
cctcaaagacaggcagccaagaaagcatctgaaaatatgatgcgtacacaagtcattgga
tcaaagaaggagcaaacgaaagatgaagataagaaggaattgcagaaagaactaagtaaa
aataaggatcgccaggatttatccaaagattcgggcaaagaaattgcaatgaaacagaag
aataaagtatcgaaagcaactaataataaatccatgacgttgatagagttgacatcacca
ttagctgaacctttaaaagaaaaggacataaaatctaaaaaggctgaaaaattagacaaa
gacataatagttgcatatgtgccacaacgacaggccgcaaaaaaagccgctgaacatatt
aaagggctaggaaaagttgtgacgtcagatgctacaagcacagttacactttcagaagat
aaacccttgtcactcacaccaagtacaaaatcaataccaccatctatacccaataaatcc
aatattctttcttcaccaaagctatcgagctcgtcttcatccagctcaagttcaagctct
tcatctggtagtactggttcttcgtcctcatcaagcgattcagatgatgattcagaaggc
gataaaaaaggttcgccctttcttaacaagggatcgaaatcctcaagtacagcctcttct
gacgaatcatccagtagtgattccgaatcaagtgaatcgagctccgatgatgaaacgagt
catagtgcccctagaaagaattcagtcgtcacaccggccaaaccaaaaagcaccaacatg
tcaaacaagcgaaaagatactatcgataaaaaagccaacagtgccgtgcttcccgcatca
cctaaaagagaggaatcgattagatcaccaacgagtaaagcctttgggagaactggaaaa
ggcttaccaaacgatagacatgaatgttctgacaaccaatcgggaactttggttaagagt
tccatcaaatcaactctgtccccaaccaaaacagctcccaagaatgaaaaaagtttcaga
cgtattattgaagaaaaacagagtagaattacaaccaactctctcccagaaaagccagcc
aaattaccagatttggcaacaattgcaaaatctacaacaagaaaacgaaaatcaagttta
cttgaagagagattacagcaagaaaataaagtcagcgttgggaataaaacaaaaaatgaa
ccaaagtcaatcacttcatcatcatctccagcacaatccccgccccaaaccaattcgaaa
tccacgaaaagtcaatcagttgaaagtgcaaagagtatgtcaagtgaaaaccgtcctacc
atcgaaaagagtagcaagtcctgtgaactttcacctacgaaatgggaaacgaacgagagg
ttaagaactattgaaccaaaaccacttgtgcaatcactggaacaagaaattaatgagcgg
aaggcagagtgtcaatcaataagtacaagcattggcaataaatcaaaattatctgatgcc
ttagataagttgttctgtaaacagaaggaaaaggaacaacaacaacaacaacaacaacaa
caacaacaacaacaacaacaacagcagcagcagcagcagtcagacgaagaacaacaagaa
aaagaagaacaagaacaacaacaacagaaatcactacaaaaattggacaaccaaattaag
cgtttatcgcatagtttagaagttaataagagcactgttgacatggacattgaaccaaaa
gtatcaattgttcaagatgagattattgaaatagtgaaagaaactaaaaatgaatgccca
gttcaaaatgagacgcaaaatcaaaacttagttaaactagataaactaactcaatcagat
caagcgaacgaatgtgatcaagttgagcaacagctacaaccaagtgctacaaacaagtac
gaacaagagcaatttgtaaataacatgccaaagccaccaacaccaaaatcctcgttgatc
ttttctccacctccaaccagtcttacaatcgacaagcgtgaagcctctatatttgacttt
gctgacaattttacaataccaaacgattcagctgtatctttactttcattcaattctgat
aatttgttcaaggaagacagtgccaaagaaactatggatttagtcgcaaatttacggcaa
aatataaagaagggaggcaaaggtgatgaatgttgcaaggcaaagccacaatgcataagt
catgtgcaatcgatcgaaccagaaattccacacgatagttgcacaactactaataatgat
cctaatcgttctattggtataaaagcaaaatcaatggcacaaccaacaatagttattgat
ttggaccaagagaacagtagcgatgaaagaaaattaccatcatcaaatgtatcgactatt
gaaacatcaaaaccatcaacgattgatagcaatataattcaacaaacctctacacaacca
atagaaaaggaccaacatgaaaataaaagcgcaagtaccaatacagtaacatcgccttta
cagctgcaaactgaagttgaacaaattgctagtaaaatgctcaatgttcttccgtcgcct
gctgatattcttatggaaagtgaaatgaatgaatcgcaaagcatcaatacgtttcatatg
cagccatatacaagatgtagtacactcaatgggaacaaagagacatttaatcattctcta
caaatacatcatggaaaaactcagctaaatgtaaagaacgatgaagttaccattcgacac
cgaagtgaactgatgggagatatcgatgaaaatgaaggttatatgagaaataaatggtcg
gaacaagaaatgattcagacaaggcgatcagtttcatcatctcccagctctgaatcagag
aataatgatgtgcaagaggaaaataaacaagaacaagaactgaaagcacaaccccataaa
gtgaatgatgcaaatcttcaatcttcaaatgagctaggaatgccaaatactattgcattc
cgtgccaacgaacttgttatcaatgaaaacattcaagatatgttgtcattttcatcgcaa
ccgcacccaactggacatcaatttaacattcccaatgaaaatggccccgtttcattattt
ccatcatctggtggtagccttaatacacaaataccattcccatcacctggagctgccatg
tttcctccaacatttgttaatgcattcacatctgcggcaacttcacaaccaacatcaaaa
aatatggaaacactaactccaaattcagcaataaatacttcaatgaactatccttcaaat
ctttgtgccgcttttacgtcatcttcacgcaatatagctataacaacttctatgattgca
ccatcgcccgttcaatcagatgcatcatctgttgttccgccaaaaggtaatgatctgaaa
tcaatttcacaatcatcaatactggcatcaccgccgccaccacagccacatacgttaggt
aataacaacaataatatcatcagcaacaaactcgaattaaatcgcgtaccacctgttcaa
ccagttctctcacctcaaacatcaacaagtgaaacacgtcaatgtcagaaacaatccttg
ggtcaaagtcgaacaccacaatcgcaaattttgcctgattccgttcattacagtttagaa
aatatgccaaacgatttaacatctaatatggaccggaatatttctggtgaacagtcatca
aaacgtcctacacgttttaacacacaactggttcaaactacactcaagtcaccgagtaaa
tcaccaggaaaaagtccaaggcaaatggaaattgttcgacgaaaatccgaatcatcgaga
ggtcgttcgcgtggtgcacgaaattcaactgttggtcgtggtagtactgcacgaatttca
tcatctactactagaggtcgtggacgtggtcgagctccacttgtggtaccaatggcaata
ccaaatactttatttgatctaaataatcatattggatccggaacaattcataataaacta
cagggaacggtgtatgacctagactttgatgaagatttgaaatgtaatgataacgtcgaa
aatttaaaatcaatgcgcgaaagacgacgttccattgactatcggcatcaatctgattcg
tttcggtcacgggatgctagtgaatcgccgaaattttcaactgcttcaaataatcaaaaa
aatgctggcgaaaaatcgattccagcatggcgagcagatgttcgcgatttgagacctcca
tcgccacatgatgtaaattctgtgatatcaatgcaaaatactccgtctatggttcatgca
gcaccacccattcctacgattgaaccagttatgcctggcccagttgatatgcgaacgtat
aattctggtttcgatgctagtaacaacgatgtgttcaatagtagtaatatgttaggtgcc
tttgcaagcggtttagctgaccaaactttacctgatattgacgaagagttagaaaaagat
tttcaatccgccttaaaagcaagcaatacaaaaacatctacaattgctggacgtaatgat
gaaacgagaactggcgttgttgagttgaattttgtaccaaatgaaaatgtggcacgtttt
acatcacatgtagtggatcccatcatgattgatccggtaatgtcattatcactagataac
cagttggaagaaactgagccaccaaaacattcattgataaagcttaaaataaaaggaccc
catgcaaggcctgaaaattacacatcaactgttctaacttaccaacctaataccactata
gaacaaacgatccaaggtgctccgaataattccattcgacgaatgcgtaaaaaggaacta
ttgcgtcaatattggacacaagaaaatatggatgacacaaattgtacacaacaacaagat
caggcacaaaattctacatcggcagccacaaacagcggtcgtagtgcaggtattccaaaa
gctgttgactcaatgagttcgataccaacaaaagatgattataaagactatacagctctt
gacattaaaaagcgaaaggttccagcaaatcgtgaacttcgacaattagatgttccatca
tatgaagaaatgcccgagcgtcgacgaagtgtatgttcaaatgcaagcaatacatcttcc
agcaatgctggcgaaagcagtaaaaggaaaacaagaactaagcaagcagtaatgactaca
cccaaattaaaaataaaacttggtccagatgtatttgaagcatcaggtattagtagcagc
ggtggtggtggtaatggtggtagtgcaagacccccaaaaaagcgtttatcgaacatgaca
atacctagttttgaagagttacgtagagagagcatgaattaccgtaaacaagtcattagc
caattcaatgatacagcaaaaccaaagaaaaaagacaagtccaaacgtgaaaaaggaaaa
cataaaaagaagaaagaaaaagaaaaggacaaggaaaagaaacccaaagttgaaattgta
agcaatgacatgaatccatcgaagttaattatccgttttgcaaagcgtaaagctgaaaca
tcgattaataacgattccgatgatgagccatcgacagcagcatcaacaacggtagcatcg
agtagcacgaattcatcagaactgtctaccgcgccaattcgattaaagttagcaagaagt
tcacaaggttatgtgatggctgagcctacggcatcaataagcaacacaaaactttccaca
acaaaagacaacaacgatctggcaaaatgtcaagtagtgctaactgatttcacaaagtta
tgtgatgcagagaagcatgcttacactaatttgcaactacaaccaaatggaaatttggca
gatcgtaatttaaataatacatctataaatacaagtaccacgaatcgggaagtaaatcag
atggatgaccattcgtcaaataacgaacaggattcaagcttgccaattattcctctaaat
tgtgaagttcggtga
DBGET
integrated database retrieval system
