Contarinia nasturtii (swede midge): 116339267
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Entry
116339267 CDS
T08003
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03018
RNA degradation
cns03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116339267
09123 Folding, sorting and degradation
03018 RNA degradation
116339267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cns03019
]
116339267
03041 Spliceosome [BR:
cns03041
]
116339267
Messenger RNA biogenesis [BR:
cns03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116339267
mRNA degradation factors
5'-3' decay
Lsm complex
116339267
Spliceosome [BR:
cns03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
116339267
Complex C
U2 snRNP components
116339267
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
116339267
NCBI-ProteinID:
XP_031620903
LinkDB
All DBs
Position
Unknown
AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVNDTEKYPHMLSVKNC
FIRGSVVRYVQLPGEEVDTQLLQDAARKEAVTSTR
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgctgttctactcgttcttcaagtcattggtgggaaaggatgtggtcgttgaattgaaa
aatgatttgagtatatgcggcacattgcactccgtcgaccaatatctgaatatcaaattg
accgacatcagtgtgaatgacacagaaaaatatccacacatgttatcggtgaaaaattgt
ttcatccgtggttcagtcgtgcgttatgttcaattacccggagaagaagtggatactcaa
ttgttacaagatgcagcacgcaaagaagctgtcaccagcacccgctaa
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