KEGG   Contarinia nasturtii (swede midge): 116339303
Entry
116339303         CDS       T08003                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit 1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
cns  Contarinia nasturtii (swede midge)
Pathway
cns03030  DNA replication
cns03410  Base excision repair
cns03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cns00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    116339303
   03410 Base excision repair
    116339303
   03420 Nucleotide excision repair
    116339303
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cns03032]
    116339303
   03400 DNA repair and recombination proteins [BR:cns03400]
    116339303
Enzymes [BR:cns01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     116339303
DNA replication proteins [BR:cns03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    116339303
DNA repair and recombination proteins [BR:cns03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      116339303
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2 CAP-like_CFAP184 APP_N
Other DBs
NCBI-GeneID: 116339303
NCBI-ProteinID: XP_031620961
LinkDB
Position
Unknown
AA seq 2216 aa
MSVNTGRYVAEDRIEGENNSIGIRESRENDKIDSKYGFDRVKDTQERTGYLINMHSTEIL
DEDRRLVAALDLFFIQMDGSRFKASVVYEPYFLVLPNPEQSLEVARYLQKKYTGQLTRIE
HIKKEDLDMANHLIGKQQQFLKLLFPNVNALNKVRRDIMSAVKKNREREKTNTNYIKLLS
TSLAHSSNTVTTKSADYFDYIADIREYDVPYHVRVSIDLKLNCGLWYDIRCRPGGLEMPL
ITPRPDILDRPEAIVLAYDIETTKLPLKFPDAQSDQIMMISYMIDGQGYLITNREIISCD
VNDFEYTPKPEFEGNFIVFNEPDEMSVIQKFFDHILEVKPHIIVSYNGDFFDWPFVETRA
ATYDMDMKREIGFWKNRDGNYLSRPVMHMDCLCWVKRDSYLPVGSQGLKAVAKAKLRYDP
VELDPEEMCKMAVEQPQVLSNYSVSDAVATYYLYMKYVNPFIFALTTIIPMEPDEVLRKG
SGTLCETLLMVQAFHANIVFPNKQQSELNKLSDDGHVLDSETYVGGHVEALESGVFRADI
PCRFRLDQEMVMKLQNNVDNVLKHAIEAEENVPLDLVTNLEQVKNEILAGLKELYDVPNR
VEQPVIFHLDVGAMYPNIILTNRLQPSSMVCETDCAACDFNKPDAECKRVMDWMWRGEML
PASKNEYQRIQQQLETEKFPPLFPGGPNRAFHELSKEDQAAYEKKRLNDYCRKAYKKTKI
TRLENRKSTVCQKENSFYVDTVRAFRDRRYEYKGMTKVAKAAVAKAVAGGDASEIKAAQG
REVLYDSLQLAHKCILNSFYGYVMRRGARWHSMSMAGIVCLTGANIIRRAREIVERVGRP
LELDTDGIWCIMPATFPQEFTIHTTHEKKKKFNISYPNAVLNTMVKDFFTNDQYHELLPK
SPDDDPNDVPQYKKRAENSIFFEVDGPYLAMVLPAAKEEGKKLKKRYAVFNFDGSLAELK
GFEVKRRGELQLIKIFQSSVFEAFLHGSTLDECYASVAKVADYWLDVLYSKGSNMPDSEL
FELISENRSMSRKLEDYGAQKSTSISTAKRLAEFLGDQMVKDAGLACKYIISKKPEGSPV
TERAIPLAIFQSDPSVRRHYLRRWLKDNTMGDADIRDVLDWNYYIERLGGTIQKIITIPA
ALQGVSNPVPRIQHPDWLHKRMLEKNDVLKQRRINEIFSVKPKPIAEPTDDSDNENDDDS
NAGESNDEMEIRDMEDIGSNVVSGARRPAVHRRKRNASEMETDDTANEAKTWREALGPPP
EVGNSREQIQDWVEYHKKKWQWQIQQRNRQRTHQTSKKSRTDNAIMHRPTSVGATARASI
GGFIRRTQRSIIEQPWQIIQILSVDELGSYTVWAMVGTELHKIKLNIPRIFYVNKRTPAP
NEEGCMWKQVHRTLPRSRPVFHLYQYIVSENIFKENRLGMLADLATPDIEGIYETQMQLE
FRALIQLGCICSVQRTVAREIAAKKSTNAPDNFSIEQLETRPMSQQPYLNGGGNLKRLFL
YQHSSGNGKRELWGLFIPIIKKSIIICLDTVRTNQMPTMKNFYLAERLTYFKDATADKAP
PDDMQFEVFFEVDSKLVYRHISHLLTAFSSEKKGPALLCVQAGITLNKLNLAIPAASEFP
QTQIFIVDDASLLTGLDWQRNGTKSMLRHFFNLNNVVDLMLEQCRYYRLPIGNMPADPIM
FGADIFYARLLQKHNFVLWASPTSRPDLGGREADDNRLLGEFEENITVVQNNCGFYENVC
VELAIDSLAVTALLQASKIQEIEGASSAITFDVMPQASLEDMISNNPAASSLSNYDESAL
CSAALKVMRSMVNSWLREVAIDRNVFADFQIVHFYRWIRSSTSLLYDPALRRNLNNLMQK
IFLQIISEFQRLNAKIIYADFNRIILNSGKKSIVDAISYVEYVVQSIRNKELFHSINLTY
QQSWEFLLWMDTANYSGPLAKIPRELQASELTQNSEIINQTNDDDEVKIEMNWNIAEQLP
EEGNCRAEFEAVLKLFMDALVNTNSVKEAIEAITMYAYEIVQRLHKGYGPGRVSPATQFC
NALIEVLNNMKDVDDEIQTLRRNMLRLIGLGEFSDLAKWQDKVHTYVLNEVICKACNQCR
DIDLCKDKDRATVNDIPVWLCSQCYVYYENEEIEIRLLDVIHRKIMSYTLQDLRCTRCKE
IKRDNMAALCSCAGSFDTLIPAKKLRQLLETFLEVADAHQMHLLKEEVQVFLTHSI
NT seq 6651 nt   +upstreamnt  +downstreamnt
atgagtgtgaataccggcagatatgttgcggaagatcgaattgaaggggagaacaattca
attggcattcgagagtcacgcgaaaatgataaaatcgattcaaaatatggatttgatcgt
gtcaaagacacacaggagcgtaccggttatctgataaacatgcattccaccgaaattctt
gacgaagaccgacgtttggtggccgccttggatttatttttcatccaaatggacggaagc
cgtttcaaagcatcagttgtatacgaaccatattttcttgttcttccaaatcccgaacaa
tcgcttgaggttgcacgttatttgcaaaagaaatacaccggccaattgacacgcatcgaa
cacataaaaaaagaagatcttgatatggcaaatcatttgattggcaaacaacagcaattt
ttaaaattattatttccaaatgtgaatgcactgaataaagtgcgccgtgatattatgtcc
gcggtaaaaaagaatcgtgaacgtgaaaaaaccaatacgaattacattaaattattatca
acatcattggcgcacagttcaaatacggtgacaacaaaaagtgccgattactttgattat
attgccgatattcgtgaatatgatgtaccatatcatgttcgggtgtcgatcgatttgaaa
ttaaattgtggtttatggtatgatattcgatgtcgaccgggtggcttagaaatgccattg
ataacaccaagacccgatattttagatcgaccggaagcaattgtacttgcttatgatatt
gaaacaacaaaattaccattgaaatttccggacgcacaaagcgatcaaattatgatgatt
tcgtatatgatcgatggtcaaggttatctgatcacaaacagagaaatcatctcatgcgat
gtcaatgattttgaatacacgccaaaaccagagtttgaaggaaatttcatcgtgtttaat
gaaccggacgaaatgagtgtcattcaaaagtttttcgatcatattttagaggtgaaacca
catattattgtatcgtacaacggtgattttttcgattggccatttgttgagacgcgagcc
gccacatatgacatggatatgaaacgtgaaattggtttctggaaaaatcgcgacggaaac
tatttgtcacggccagtcatgcatatggattgtttgtgttgggtgaaacgtgattcgtat
ttgccggtcggaagtcaaggtttgaaagcggttgctaaagcaaagctacgctatgatcca
gttgaacttgatcccgaagaaatgtgtaaaatggctgttgaacagccgcaagtactatcc
aattactctgtatccgatgccgttgccacatattatctctacatgaaatatgtgaatcca
ttcatatttgctttgacaacaatcattccgatggaaccggacgaagtgcttcgcaaaggt
tcgggaacattgtgtgaaactctgttgatggtgcaagcatttcatgcaaacattgtcttc
ccaaacaaacaacaatctgaattgaataaattgtccgacgatggacacgttcttgattct
gaaacgtatgtaggcggtcatgtcgaagcacttgaatcgggtgtatttcgtgctgatatt
ccatgtcgatttcggctcgatcaagaaatggtgatgaaactacaaaacaatgtcgacaat
gtgctaaagcatgccatcgaagccgaagaaaatgtcccattggatttggtcacgaatttg
gagcaagtgaagaatgaaattttggccggactgaaagaattgtacgatgtaccaaatcgt
gtcgaacaaccggtcatttttcatttggacgttggtgctatgtatccaaatatcattcta
acaaatcgattgcaaccatcgtcaatggtttgcgaaacggactgtgctgcatgcgatttt
aataagccagacgccgaatgcaaacgtgttatggactggatgtggcgtggtgaaatgtta
ccagcttcgaaaaatgaatatcaacgaatccagcaacagcttgaaacggaaaaatttcca
ccactcttcccgggtggtccaaatcgtgcatttcacgaactatcgaaagaagatcaggcc
gcctacgaaaagaagcggttgaatgattattgccggaaagcgtataagaaaacaaaaatc
acacgtcttgagaatcgaaaatcgacagtgtgccaaaaggagaacagtttttacgttgat
accgttcgcgcctttcgtgatcgtcgttatgaatataaaggcatgacaaaagtggcaaag
gctgccgttgcaaaagcggtggctggcggtgatgcaagtgaaataaaagccgctcaaggt
cgtgaagttttgtacgattcacttcaattggcccacaaatgtattttgaactcattttat
ggttatgttatgcgacgtggtgcacgatggcacagcatgtcaatggctggtattgtttgt
ttgaccggtgccaatataattcgtcgtgcacgtgagattgtcgaacgtgttggccgtcca
ttggaactggacacagatggaatttggtgtattatgccagccacatttccacaagagttc
accattcatacgacacatgaaaagaagaaaaaattcaacatttcatatccaaatgctgtg
ctgaatactatggtcaaagatttctttacaaatgatcaataccatgaactccttcccaaa
tcacctgacgacgatccaaatgatgtgccacagtataaaaaacgtgccgaaaattcaatt
ttctttgaagtggacggtccatatttggcaatggttttaccggctgccaaagaagaagga
aagaaacttaaaaaacggtacgctgttttcaattttgacggatcactggctgaactaaag
ggtttcgaagtgaaacgacgcggtgaattgcaattgattaagattttccagtcatcagta
ttcgaagcattcttacatggaagtacattggatgagtgttatgcaagtgttgccaaagtg
gccgactattggttggacgtgttgtacagcaaaggttcaaatatgccggattctgaattg
tttgaattgatttccgaaaatcgttcaatgtcccgtaaattagaagattatggtgcacaa
aaatcgacatccatttcgacggcaaaacgtttggccgaatttctcggtgatcaaatggtt
aaagatgctggattggcatgtaaatacatcatatcaaagaaaccagaaggttcaccagtt
acagaaagagccatcccattggccattttccagtcggacccaagtgtgcgtcgtcattac
ttgcgtcgatggttaaaagataacacaatgggcgatgctgatattcgtgatgttctcgat
tggaattactacatcgaacgtttgggtggtaccattcaaaagattatcacaattccggct
gcgttacaaggtgttagtaatccagtgcctcgaattcaacatcctgactggttgcacaag
cgaatgctggaaaagaatgatgttttaaaacaacgtcgcatcaatgaaatatttagcgtt
aaaccaaagcccatcgctgagccgacggatgatagtgacaatgaaaatgacgacgacagt
aatgctggtgaatcgaatgatgaaatggaaatccgtgacatggaagatattggatcgaat
gttgtgtctggtgcacgtcgaccggctgttcatcgtcgtaaacgaaatgccagcgaaatg
gaaaccgatgacactgcaaatgaagcaaaaacatggcgcgaagcactcggaccaccgccc
gaagtcggaaattcacgtgaacagattcaagactgggttgaatatcacaagaaaaaatgg
caatggcaaatccaacaacgaaatcgacaacgcacccatcaaactagcaaaaaatcgcgc
acggacaatgcgataatgcatcgtccgacgtcagttggagcgacagcccgagcatccatt
ggaggttttattcgtcgaacccagcgcagcatcatcgaacaaccatggcaaatcattcaa
attctatcggttgatgaacttggttcgtacacagtttgggcaatggttggcacagaattg
cataaaatcaaattgaatattccgcgcatattttacgtaaataaacgaacaccagcacca
aacgaagagggttgcatgtggaaacaagtgcatcgaacattgccacgatcacggccggta
tttcatttgtatcaatacattgtatcggaaaatattttcaaagagaatcgtttgggaatg
ttagccgatttagcaacacccgacattgaaggcatttatgaaacacaaatgcaactcgaa
ttccgtgctttaattcaattgggatgcatttgttcggttcaacggactgttgcacgtgaa
attgccgccaaaaaatcaacaaatgcacccgataatttttcaatcgaacaactcgaaaca
cgaccaatgtcacaacaaccgtatttaaatggcggcggaaatttgaaacgtttattccta
taccagcacagttcgggaaatggtaaacgtgaattgtggggtctgttcattccaatcatc
aaaaaatcgattatcatttgcttggatacggtgcgtacaaatcaaatgccaacgatgaaa
aacttttatctcgccgaacgattgacctattttaaagatgcaacagctgataaagcacca
ccggacgatatgcaatttgaagtattctttgaagttgattcaaaattggtgtatcgtcac
ataagccatttgttgaccgcttttagtagcgaaaagaaaggtccggctttgctttgcgtt
caggccggcatcacgttgaacaaattgaatttggcaattccggcggcaagtgaatttcca
caaacgcaaattttcatcgttgacgatgcatcgctgttgaccggcttggattggcaacgt
aacggtaccaaatcgatgcttcgacattttttcaatttgaacaatgtggttgatttgatg
ttggaacaatgtcgttactatcgattacccattggtaatatgcccgccgatccaattatg
tttggtgctgatattttctatgcaagactcttgcaaaaacataattttgtactgtgggca
tcgccgaccagtcgaccagacttgggcggtcgtgaagcggatgacaatcgtttgttgggc
gaattcgaagagaatattaccgttgttcagaataattgtggtttttatgaaaatgtatgt
gtggaattggccattgacagtttggccgtgacagcattgttgcaagcgagtaaaattcaa
gaaattgaaggtgccagctcagccattacattcgatgtaatgccacaggcatcgcttgaa
gatatgatctcgaataatccggccgcatcgtcactgtcaaattatgatgagtccgcactg
tgcagtgctgcattgaaggtcatgagatcaatggttaacagttggttgcgtgaagtggcc
attgatcgtaatgtatttgccgattttcaaattgtccatttctatcgatggatacgatcg
agcacatcacttttatacgatccagctttgcgacgcaatcttaacaatttaatgcagaaa
attttcttacaaatcatcagcgaatttcaacgtttaaacgcaaaaatcatttatgccgat
ttcaatcgaatcattttgaattcgggcaaaaaatccatcgttgatgcaatcagctatgtt
gagtacgtcgtacagagtattcggaataaagaactgttccacagtattaacttgacatac
caacagtcatgggagttcctactctggatggatacagccaactattcgggtccattagct
aaaattccacgtgaattacaagcatccgaactaacacaaaatagtgagatcattaatcaa
acaaatgatgatgatgaggtgaaaatcgaaatgaattggaatattgccgaacaattgccc
gaagaaggaaattgtcgtgccgaatttgaagcggtattgaaattatttatggatgcattg
gtcaatacgaattcggttaaagaagcaattgaagccatcacaatgtatgcctatgaaatt
gttcaacgattacacaaaggatatggaccgggacgagttagccccgccacacaattttgt
aatgcactcatcgaagtgctgaataatatgaaagatgttgatgatgaaattcaaactctt
cggcgaaacatgttgcgtttaattggtttgggtgaattcagtgacttggccaaatggcaa
gacaaagttcacacgtatgttctaaatgaagtcatttgcaaagcatgcaatcaatgccgt
gacattgatttgtgcaaagacaaagatcgagccaccgtcaatgacataccggtatggctt
tgttcccagtgctatgtttactatgaaaatgaggaaatcgaaattcgacttttggatgta
atccatcgcaaaatcatgtcatacacactgcaagatctgcgatgcacccgatgcaaggaa
ataaaacgtgataatatggctgcgttgtgtagctgtgccggttcatttgacacattgata
ccagcgaaaaaactacgacaactgcttgaaacattcttagaagtggccgatgctcatcaa
atgcatttgctcaaagaagaagttcaagtttttctcacgcactccatttaa

DBGET integrated database retrieval system