Contarinia nasturtii (swede midge): 116339352
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Entry
116339352 CDS
T08003
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116339352
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
PDZ
RA
RA_2
PDZ_6
cNMP_binding
PDZ_2
Motif
Other DBs
NCBI-GeneID:
116339352
NCBI-ProteinID:
XP_031621041
LinkDB
All DBs
Position
Unknown
AA seq
1807 aa
AA seq
DB search
MLKHYYVSPKKRSKSQSSEASDGSDTATSCIEHHEYLTDFMRATKNISRKAFHSFHEITS
SEPNVSIASSHTIQASVVLSASADPSQHDHENSHSSENTTPIQTPQKSYETRLTRMRLAH
AFSTAVTYSRSRFAHLPSGTSFCSTHIGAHGIGNAEPTSTSGLTPPVRRWNSFHSTRGEC
HPNKFRRERKSTSPSIVISRRNGDGFRQLSECFVSETQEILATDESEIGSVAAEAASKID
DLIRHDNNDEEIEDVEDIDAIIGVAIPKPKIMDPPLHHTLHSSQTALSANVKRFGSGRPE
LYQNQKCNRGSHSSDTSSAYSGSDTMTSVHSSSLDADEVDLSGLVESVVDSDEEDLAESM
DSLAVRDTVRECLEKDPTDRTEEDIETLLEFTKNLQAFTNMTLAVRRALCSVMVFAVVEK
AGTTVMNDGEELDSWSVLINGHVEVEYANGETDELQVGDSFGILPTMDKLYHKGVMKTKC
DDCQFVCITQTDYYRIQHQGEENTKRHEENGQLVMVTELRHGTMEGNVRRGHVVIRGTPE
RLMVQLIEENSMTDPTYVEDFLLTHRTFITCSQNVLRQLLQWFESESTLPSQTTASPVQI
RDRVTRVILLWVNNHFTDFETDPHMMKYLEQFESGLESKNMHDQIHLLHIACAAKARTRV
VTLARSSRDEDLHFSIIGGYEKGGCGIFISNVDKKTKPEDVGLKRGDQILEVNGNSFEHM
KLARALELMTGTTHLCITVKSNLLAFKEMLQTPDNNSPRPRSGRRTVASSELARLHSQNS
QRVRLSSADLLTSSTPFDQTDHVSATNSDSTSVHMPFSSNLPPTAAKKDSATSISSSHIA
PPSSASKSGFMTLGPKRRLQKALIKMNLYPKNSSAALLLDTDDQETQSASSSPISTTSPS
NGPATTITTPTPTGSIGSNCSIATSTTSSHTGDSASLANVSATNKTSGSNLYHSQSNPDL
TTIYYEDLRASDYPEHVLKVYKADQSCKYLLVHKETTAHEVVMLALQEFGIHETSSNFSL
CEVSVGEGGMIKQRRLPDQLPNLAERIGLSARYYLKTNGITETLVPDDMAPELVRESAVY
FLQLNANEVAIQLTVQDYAIFRQIESTEYVDDLFEIQSNYGVPMLKKFSELVNKEMFWVV
TEVCSEYNMVRRMKIVKQFIKIARHCKECQNFNSMFAILSGLGHAAVSRLRLTWEKLPSK
YQKLFNDLQELMDPSRNMSKYRQLVLTELNEQHPIIPFYPVVKKDLTFIHLGNDTYVESL
VNFEKLRMIAKEIRSLTYMCSSPYDLLTMLEMRGQPPSAAMVALNQMVHNVQNIHPQKSH
THSHTHSSGMSALASTLGALAVSASGQATVKRRKKSAAAPNPKKMFEEAQMVRRVKAYLN
NIKVITDEDNLHQLSLECEQSGGSAPSSVTIRKRHPSPTLSTTSSTSSTSEGKKVQMAGG
VSIITNNDPHDRRPPKFGAASPQAVKKLLSLSEQTKTRPHQPRHFNNLMTHVGTGNTTNT
FGMCANTTTSIGLVAADTTLRQSSGLPSLYYHHNSGLPTLSSSPSPTPSPNALRTQSSVP
YSAHNYGFGNQTTNVCANNTGIACLPTRAVHERSHSDGTTAPLPSVDLSMESSSVTSLSN
LPLRKHPITGSLTSNDSGHGSYIPSGSGSGAVSDFHSDNFNGSSNNGGGLYQVACSIVHN
SPSPITSNDRFHPQRRHSAISHAYPAHNVGINGPHLLPNNAPHVKTCTNLIAGSGNGAIN
SAGVGNRLQQVPPAYNVAAQRALLHRLGRAHSHEGVTSSISISSAPLGFYQPNTEDTDDD
GAQVSAV
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaacattattatgtatcaccgaaaaaacgttcgaaatcgcaaagctcggaagcg
agtgacggcagcgacacggcaacatcttgcatcgaacatcatgagtatttaactgatttt
atgcgagcgacgaaaaatatttcacgaaaagcttttcacagttttcatgagataacctcg
agtgagccaaatgtcagcattgcatcgtcgcacaccatacaggcgtcggtggtactatcg
gcatcggccgatccatcacagcatgatcatgaaaattcacacagttcagagaatacgaca
ccgattcaaacaccacaaaaatcctatgagacgcgtttaacccgtatgagattggcgcat
gcattcagcactgcggtaacatacagtcgaagtcgtttcgcccatttgccatctggaacc
agtttttgttcaactcacattggcgctcatggcatcgggaacgcagaaccaacaagtaca
tcaggactgacgccaccggttcgtcgatggaattcattccattcaacacgcggtgaatgt
catccaaataaatttcgccgagaacgaaaatctacatcaccctcaattgttataagcaga
aggaatggtgatggttttcgtcagctcagtgagtgttttgtttccgaaacacaggagata
ctagctacagacgaatcagaaataggtagtgtagcagcagaagccgcatccaaaatcgac
gatttgattcgacacgataacaacgacgaagaaattgaagacgtcgaagatatcgatgca
ataattggtgtcgcaattcccaaaccgaaaattatggatcccccgcttcatcatacgctg
cactcatcacagacagctctatcggcaaatgtcaagcggtttggcagcggccgaccagaa
ttataccaaaatcaaaagtgcaatcgtggctctcattcaagtgacacaagttcagcatat
agtgggtccgacacaatgacatctgtacatagctcgtcactagatgccgatgaggtggat
ctctctggcttagtcgaatcggtcgtcgattccgatgaggaagacttggcagaaagcatg
gatagtttggcagtacgtgatacggttcgcgagtgtttggaaaaagatccaaccgatcga
acagaagaagatatagaaactttgcttgaatttacaaaaaatctgcaggcattcacaaat
atgacattagctgtaagaagagcattgtgctcggtaatggtgtttgccgtcgtagaaaaa
gcgggtacaacggtgatgaatgatggcgaagagctggattcgtggagtgtgctcatcaat
ggtcatgtcgaagttgaatatgcaaatggcgaaacggatgagcttcaagtcggtgatagc
tttggcatattgccaacaatggacaaattatatcataaaggtgttatgaaaacaaaatgc
gacgattgtcagtttgtgtgcatcacacaaaccgattattatcgcattcaacatcaaggt
gaagaaaatacaaaacgccacgaagaaaatggacaattagttatggtaactgaattacgg
catggtactatggaaggcaatgtacgtcgaggacacgtggtaattcggggaacaccggaa
cgtttaatggttcaattaattgaagaaaactcaatgacagatccaacgtatgtggaggac
ttcttgttgacgcatcgcacatttatcacatgctcgcagaatgtgttgcgacagttgttg
caatggtttgaaagtgaatcaacgctgccgtctcaaacgaccgcctcaccagtacaaata
cgtgatcgtgtaacacgtgtgattttgttatgggtcaacaatcactttacggatttcgaa
actgatccacatatgatgaaatatttggaacaattcgaaagtggactggaaagtaaaaat
atgcatgaccaaattcatttgttgcatattgcatgtgcggcaaaggctcgaacaagagtc
gttacattggcacgatcctcacgtgacgaagacttacacttcagtattattggcggctat
gagaagggtggctgtggcattttcatatcaaatgttgacaagaaaacaaaacccgaagat
gtcggattgaaacgtggtgatcaaattcttgaagtgaatggcaacagttttgaacacatg
aaattggcacgtgcacttgaattaatgactggcacaacacatttgtgtataacggttaaa
agtaatttactggcattcaaagaaatgctacaaacacccgacaacaattcaccacgaccg
agatccggtcgacgaacggttgcttcctccgaattggcacgattgcattcgcagaatagt
caacgtgtgcggttatcatccgccgaccttctgacaagctcaacaccattcgatcaaacc
gatcatgtttccgcaacaaatagcgattcaacatcagtgcacatgccattctcatcaaat
cttccaccaacagcggcgaaaaaagattcggccacgtccatatcatcatcacacatagca
ccaccgtcatctgcaagcaaatcgggtttcatgacccttgggccaaaacgtcgcctccaa
aaagcactcatcaaaatgaatctgtatccgaaaaattccagtgccgctctgctcctcgat
acagatgaccaagaaacacaatcagctagctcatcgcccatttccacaacatcgccgtca
aatggtccagccacaacaataacaacaccaactccaaccggttcaattggatcaaattgt
tcgattgcaacgtcaacaacatcatcacatacgggtgattcagcatcattggccaatgtt
agtgcgacaaataaaacgagcggcagcaatttataccattcgcaaagtaatcctgaccta
accacaatctattatgaagatttgcgtgcatcggattatccagagcatgtgcttaaagta
tataaggccgatcagagctgtaaatatttgttggtgcataaagaaaccacagcccatgaa
gtagttatgttggcactacaagagtttggcatccatgagactagttcgaatttttcattg
tgtgaagtatctgtcggcgaaggtggtatgataaaacaacgtcgattgcccgatcaactg
ccaaatttggccgaacgaattggtttatcggcccgatattacctgaaaacaaacggtatt
acggaaacacttgtacctgatgacatggcaccagaacttgttcgcgaatcggccgtttat
tttttacaattgaatgccaatgaggtggccattcagctcaccgttcaagattatgcaata
ttccggcaaatcgaatcgaccgagtatgttgatgatttgtttgaaatacagagcaactac
ggtgtgccaatgttgaaaaaattctccgaactagtcaataaagaaatgttttgggttgta
accgaagtgtgtagtgaatataatatggttaggcgaatgaaaattgttaagcaattcatt
aaaattgccagacattgcaaagaatgccaaaattttaattcaatgtttgcaatattgtcg
ggactgggtcatgcggctgtgtcgcgattacgtctcacatgggaaaaattgccatcaaaa
taccaaaagctatttaacgatttgcaagaacttatggatccatcacgaaatatgtcgaaa
tatcgccaacttgtgttgactgaactaaacgaacaacatccaatcattccattttatccc
gttgttaaaaaggatctgacattcattcatttgggcaatgacacatatgtagagtcgcta
gtgaactttgaaaaattacgtatgatcgccaaagaaatacggagtttaacgtacatgtgc
agttcaccatacgatctacttacaatgcttgaaatgagaggacaaccgccgagcgctgca
atggttgcacttaatcaaatggtacacaatgtgcaaaatatacatccacaaaaatcacat
acgcattcgcatacacatagcagtggaatgtctgctttggcatcaacattgggcgcattg
gctgtgagtgcctctggacaagctacagtgaaaagaaggaagaagtcggcagctgcacca
aatccaaagaaaatgttcgaagaagcgcaaatggtgcgacgcgttaaagcttatttgaat
aacataaaagtgataacagacgaagacaatctgcatcaattgtcattagagtgtgagcaa
agcggtggttctgcgcctagttctgtgacgatacgaaaacgtcatccgtcaccaacattg
tctacgaccagctccacaagctcaaccagtgaaggcaaaaaagttcaaatggctggcggt
gtgtccatcattacaaataacgatccacatgatcgtcgaccgccaaagtttggggccgca
tcaccacaggccgttaaaaagcttttgtcgttatctgaacaaacgaagactcgaccgcac
caacctcgacactttaacaacttgatgacacatgttggaactggcaacacaacaaacact
tttggaatgtgtgccaatacaacaacatcgattggcttggtagccgctgatacaactctt
cgtcaatcgtcaggattaccatcactttattatcatcacaattctggtttaccaacacta
tcatctagtccatcgccaacaccttcgccaaatgctcttcgaacacagagttcagtaccg
tattctgcgcacaattatggttttggaaatcaaacgacgaacgtttgtgccaacaatact
ggaatcgcatgtttaccaacacgtgctgtacacgaacgatcacattccgatggaacaacg
gcaccattaccatcagttgatctgtctatggagagcagtagtgtcacgtcactgagcaat
ttaccacttcgaaaacatcccataacaggctcattaacatcaaatgatagtggacatgga
tcatacattccgagtggaagtggcagtggtgccgtcagtgattttcattccgataacttt
aacggcagcagtaacaatggtggtggtctttatcaagttgcatgttctattgttcacaat
tcaccatccccgataacatcaaatgatcgtttccatccgcaacgacgtcattctgctata
tcgcacgcatatccagcgcacaatgttggaatcaatggaccacatttattaccaaataat
gcaccacatgtcaaaacctgtacaaatctgatagctggaagcgggaacggtgcaataaat
agtgccggcgtgggtaatcgcttacagcaagttccaccagcctacaatgtagctgcacag
cgcgctctattgcatcgattaggtagagctcatagtcatgagggcgttacgtcttccata
agcatatcatcagcaccattaggattctatcaacccaataccgaagacactgatgacgat
ggtgcacaggtatcggctgtgtaa
DBGET
integrated database retrieval system
