Contarinia nasturtii (swede midge): 116339452
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Entry
116339452 CDS
T08003
Name
(RefSeq) uncharacterized protein LOC116339452
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03015
mRNA surveillance pathway
cns04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116339452
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
116339452
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cns01009
]
116339452
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cns03019
]
116339452
03036 Chromosome and associated proteins [BR:
cns03036
]
116339452
Protein phosphatases and associated proteins [BR:
cns01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
116339452
Messenger RNA biogenesis [BR:
cns03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
116339452
Chromosome and associated proteins [BR:
cns03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
116339452
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
P2R3B_EF-hand
EF-hand_6
EF-hand_5
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
116339452
NCBI-ProteinID:
XP_031621189
LinkDB
All DBs
Position
Unknown
AA seq
1070 aa
AA seq
DB search
MATTAKQTSSNSSASASVRSSSATVSQTHFQQNTSQLNITTTHHHSHLRSSSLSDSTTNH
IYQHHQIYHSSSNNSENEQAEQDIEIIAKQISDHAEAIYQTWKARGLAPEILNCHSMNSD
AFDKTLTPSVQRQTIRRSESPQYEPKITLGELSKSSNCIDTVSALPNTSAKMSNSNLKKL
VSTFVNEDKARQQQQQQQSSIVTRKTNILTSGTIKDALRKFENIDNNATTNMRPNYLKNN
RSTNNSNTVDRQSTATATTLIAQREKSPKLQLDQTQRDQLQQSSNSFETNKLNKNVPDVL
INTIEQDKLIKPSSLLNSSNNNNNNISKNSSVSGSSASTTTISNSSTVARKKPETPAKPA
NLLNHQPAWSLKNRLKPIENGSSNDTTNAKVEEANESITEAATTATAETTTTPPSSATKT
NYENDIKSAKLVNKQNSKSNKVNKLMDEVLMEEERLINALKTGTVLNNDKLPEVITSTLS
NSNSKPLTNNTNSMTNAKIVTANAEPQQHPANWNGAQKTITVDTPKTVISNENNAQKSND
VDGVHLKMSKLRPKNDAAVPHPDLSLHTNKTGTKPANTAPAVRPFLTRGSVAERVLMFEK
CPEIKLLRNTPKDANKVPPKAVPKPEQQTTCTTLQRTIRNTKNVYIPRFHFPFGKPLSSI
TLEQTLQRLSAAFDAYPNNCMSKDDFVSVLKICSLPFYWRMPLFNCTQLTPAGLVDGKRF
CDFWKQMSVFCNDSVSRFVYIMSRGQRSRPYILPEDLVCLVQDVVDTHPGLAFLKEAAEF
HSRYVHTVIARIFYTVNRSWSGRITMAELRRSDLLQVLQLLEEEEDINQIMAYFSYEHFY
VIYCKFWELDRDHDLFIDQNDLARHNDHALSTRIIERIFSGCVTKTAKANNQRMSYTEFV
WFLLSEEDKSHSTAIEYWFRCMDLDGDGVLSMYELEYFYEEQQHRMESIGIETLPFEDCL
CQMLDMIKPSVPGCIKLGDLKRCKMTPVFFDTFFNLEKYMENEQRDPFASQREDDMSDWD
RYAAQEYELLVAEEGGDTHGSYDDEEDYESNIDILESHMDDQVAGDINEL
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgactgccaaacaaacatcttccaattcatcagcatcagcatcggttcgaagc
tcttcagcgaccgtttcacaaacgcattttcagcaaaatacctcgcaattaaatattacc
acaacacatcatcacagtcatcttcggtcctcatccctgtccgattcaaccacaaatcat
atttatcaacatcatcaaatttatcacagcagcagtaacaatagcgaaaacgaacaagcc
gaacaagacattgagatcattgccaaacaaatatcggaccacgctgaagccatctatcaa
acatggaaggcacgcggtttggctcctgaaattctcaattgtcattcgatgaatagtgac
gcatttgataaaacattaacaccgtccgtgcaacgacagacgatacgaagaagtgaatca
ccgcaatacgaaccgaaaataacactcggcgaactatcaaaatcaagcaattgtatcgat
acggtatcggcattgccgaacacatctgccaaaatgtcgaattcaaatctaaagaaacta
gtcagcacatttgtaaatgaggataaggcccgacagcaacaacaacaacaacaatcctca
attgtaacacgtaaaacaaatattctaacgagcggcacaatcaaagatgcattaagaaaa
ttcgaaaacattgacaacaatgcaacaactaacatgcggccaaactatttaaaaaataat
cgatcgacaaacaatagtaacacagtcgatcgacaatcaactgcaaccgcaactacattg
attgcgcaacgtgaaaaatcaccaaaattgcaattagatcaaacgcaacgagatcaattg
caacagtcgagcaacagttttgaaacaaataaattgaataagaatgtgcccgacgttctt
ataaacaccattgaacaggataaattgataaaaccatcatcattattaaatagtagcaat
aataataataataatattagtaaaaatagttcggtgtctggttcaagtgcatcgacaaca
acaataagtaatagttcgacggttgcacgaaaaaaaccagaaactccggccaaaccagcc
aatttgctcaatcatcagcccgcatggtcgttgaaaaatcgtctgaaacccattgaaaac
ggtagcagcaatgacacaactaatgctaaggttgaagaagcaaacgaatcaataacagaa
gcggcaaccacagcaacagcagaaacaacaacaacaccaccatcatcagcaactaaaacg
aactatgaaaatgacattaaaagtgcgaaattggtgaataagcaaaattctaaaagcaac
aaagtgaataaattaatggatgaggttttaatggaagaagagagattaataaacgcatta
aaaactggcactgttctcaataatgataaattacccgaagtgataacgtcgacactatca
aatagcaattcaaaaccactaacaaataatacaaattcaatgacaaatgcaaaaattgtc
accgcaaatgctgaaccacaacagcatccagccaattggaatggtgctcaaaagacaatt
accgtggacacaccaaaaaccgtaatttcaaacgaaaataacgcgcaaaaatcaaacgac
gtggacggtgttcatttgaaaatgagcaaactacgaccaaaaaatgatgcggctgtgcca
catcctgatcttagtttacacacaaataaaacgggcacaaaaccagccaatacagctccg
gctgtacgaccgtttttaacgcgtggttcagtcgccgaacgtgtgctcatgtttgaaaaa
tgtccggaaataaaacttctgcgaaatacaccaaaggatgcaaacaaagtaccgccaaaa
gcagtaccaaagcctgaacaacaaacgacctgcactacactgcagcgcaccattcgaaat
acaaaaaatgtatacataccaagatttcattttccgtttggaaaaccgttgtcatcgatt
acattggaacaaacactgcaacggctttcggctgcattcgatgcatatccaaataattgc
atgtccaaagatgattttgttagtgtgctgaaaatttgttcgctaccattttattggcga
atgccattattcaattgcacacaactaacaccagccggactcgttgatggaaaacggttt
tgcgacttttggaaacaaatgtcagtgttttgcaatgattcagtgtctcgattcgtttat
ataatgtcacgtggtcaaagatcacggccgtacattttacccgaagacttagtatgtctg
gtgcaggatgtagtcgatacccatccaggtcttgcgttcctcaaagaagccgccgaattt
cattcacgatacgttcacaccgtcattgcacgaatattttatacggtgaatcgcagttgg
tcgggtagaataacaatggccgaacttcgacgctccgatttactacaagttttacaatta
ctcgaagaagaagaagatattaatcaaattatggcatactttagctatgaacatttttat
gttatctattgcaaattttgggaattagatcgtgatcatgatttatttatcgatcaaaat
gatttggcccgacacaatgatcatgctctctccacacgaattattgaacgaattttctcc
ggttgtgtgacaaaaacggccaaagcaaataatcaacgaatgtcatacacagaatttgtt
tggtttttactctctgaagaagataaaagccattcaacagccattgaatattggtttaga
tgcatggatctggacggtgacggtgtgttgtcaatgtatgaattggaatatttctacgaa
gaacaacagcatcgcatggaatcaattggaattgaaactcttccgttcgaagattgtttg
tgtcaaatgctcgatatgattaagccaagtgttcccgggtgtattaaattgggcgatttg
aagcgatgcaaaatgacgcccgttttctttgacacattcttcaatttggagaaatacatg
gagaatgaacaacgtgatccatttgcatcacagcgtgaagatgatatgtctgattgggac
cggtacgcggctcaagaatatgaactgcttgttgccgaagaaggcggtgatactcatggt
tcttatgatgatgaagaagactacgaatcgaatattgatatattggaatcacatatggat
gaccaagtagccggtgatataaatgaattgtag
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