Contarinia nasturtii (swede midge): 116339506
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Entry
116339506 CDS
T08003
Name
(RefSeq) DENN domain-containing protein Crag isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cns04131
]
116339506
Membrane trafficking [BR:
cns04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
116339506
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
PPR
HEAT_HEATR1
Motif
Other DBs
NCBI-GeneID:
116339506
NCBI-ProteinID:
XP_031621280
LinkDB
All DBs
Position
Unknown
AA seq
1459 aa
AA seq
DB search
MDENRVADYFVVAGLPKNPSLLQENIFNDSSYLRSVDTVVAPIVEVGVFFPTLGETVPDG
NQILDKTPTGLDADLNHGSVRTPPCFIYYRRGNDKPPLVDIGILYENSERIMPDAQMVEF
TPGGRLANINNSTTKIFMTYRRARDDMPCNELVVSDLCIIVASRGEAPPHAFCQIHKTLN
KGIVGSDVYLCYKKSMNRPKLISYQPEILHRYPFVDHIDFPLNLCQSVPLFCLPMGSTLE
CWPNVEDTVKRNSIDPVFSTFVLTVSDGAYKVYGSALSFYEEYDASQLNEKQKELLEWTD
DSPANCSLHVNKAICLLSHHPFGDTFEKWLRFIYRMSKSEAPLTVPIERYITQLIDEVPF
PSPSILIQLSNLSNERIILTQPEDSPMPRSGAGFMQLLTNLGPDNCLHLLLLVLAEQKIL
IHSLRPSTLTAVAEAVVTLLFPFKWQCPYIPLCPLGLSEVLHAPLPYLIGVDSRFFDVYD
LPNDVTCVDLDTNNISLCDSQKELTVKLLPKRASRILRQTLRELEELAQTPVVSSTNSLD
RDFKRKMREQSLELRIQEAFLRFMASILRGYREFLVPMSKAPTVGSTDPNALFQLNAFLR
SRDKAHHKFYNYLMKTQMFIRFIEERSFVTDSGYQGYSGLAFFDECTEKVSACDDTTSEI
RFVDWDLGASSDRTKYILPLDCQPGVNDEKYTYPMFVLNPALLKPPKNHLNKLIQNASMP
PGSPMARRTKYEIKMAQKNARKCQSSPEQWANHLLTTCYSIYFLVLPSILLDANNNEQAT
LKAAYDVLSKAHKMRITCDEVCYRIMMQLCGIHNLPILAVRLYYLMKRSGIQPNAVTYGF
YNKCVLEAQWPSDTGNASKLRWNRLKNVIFAAAHFRRSTQNGGKKCSLEQNLSALDANDA
TSATSLDRDTNESNYFSIDFFAFDKLRGRFGNFGRQSERNESNLRASIGSLTSVGANETN
TKNLNGNGKEHEIDPHTNQRITADNIELIKEPRPPEQDENDSQNEFNQVQSSGTNGTSSH
EDNHIITKDNIDLAVNGNTDGDGYGDDDDDDKNSPKKVSPRTPVTQNDPLGALVEEEEEL
IKIEKTSIETKNSFLIKNNTIYTDQPILFRGQRSATFDESTPMYKSMHRSKTMPPSSVTS
SLAGFSQSFKLNFGRYSPARLNFKKDSIIPANIIENISNISPSLTGKKEMIQGGLSSIKS
AATSVAKKFDEFKDAISANNTPIKSINLDRGHNRSDDNLDVDSPTYTAPSHSRRVSSDVD
LWSRLSDSRKSSCNNLLFLGEYAKLQNSYLPETTNPQISLEHRYSSKSDVEIHLSTCSSC
HNCSETLTDKDIMAGWSAEDSNLNTTCHKCKKATVPLLSIHITSIDRTQSNEKQTDQSNV
PYLNPLVLRKELENILTQHGDDVLCKSQFVDVHNIIYWNLVWFMERIGVQTHLSNLFFHK
QNKADQKPPREPSHPLECL
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atggacgagaatcgtgtagctgactattttgtagtggctggcttaccaaaaaatccaagt
ctactacaagaaaatattttcaacgacagcagctatttgcggtcggtcgatactgttgtc
gctccaatcgttgaggtcggtgtattttttccaacacttggcgaaactgttcccgatggc
aatcaaatacttgacaaaacaccaactggtttggatgccgatttaaaccatggatccgta
cgaacaccaccatgttttatatattatcgacgtggaaatgacaaaccgccacttgttgat
attggcattttatacgagaattcggagcgaataatgccggatgctcaaatggttgaattt
actccgggcggacgattagcaaacataaataattcaacgacaaaaatttttatgacctat
cgtcgtgcacgagatgatatgccatgcaatgaattggttgtcagtgatttgtgtataata
gttgcaagccgtggtgaggcgccaccacatgcattctgtcaaattcataaaacacttaac
aagggaattgtgggcagtgacgtgtacttgtgctataaaaaatcaatgaatcgaccaaaa
cttataagctatcagccagaaatattacatcgttatccatttgtcgatcacattgatttt
ccgctaaatttatgccagagtgttccgctcttttgcctaccaatgggcagcacacttgaa
tgttggccgaatgtcgaagacacggtgaaacgaaacagcatagatcccgtattcagtaca
tttgtgttgaccgttagcgatggtgcgtacaaagtttacggttcagcgctgtcattttat
gaggaatatgacgcatcgcaactcaacgaaaaacaaaaagaattgcttgaatggacggat
gactcaccggcaaattgttcacttcacgtgaataaagcaatttgtttgctatctcatcat
ccatttggtgatacatttgagaaatggctgcgattcatttatagaatgtcaaaaagtgaa
gcacctttaaccgttccaatcgaacgctatataacacaattgatcgatgaagtaccgttt
ccatcgccgagcattttaattcaattatcaaatttatccaatgaacgaattatactgacc
caaccggaagactctccaatgccacgtagtggagcgggtttcatgcaattgcttactaat
ttaggaccagataattgcttacatctacttttactagttttagccgaacagaaaattctc
atacattcacttagaccttcaacattaacagctgttgctgaggctgttgttacacttttg
tttcccttcaaatggcaatgtccatatataccattatgcccgcttggcttatctgaagtg
ttacatgcaccgttgccatatttgattggcgttgattcgcgatttttcgatgtatatgat
ctaccaaatgatgtgacctgcgtggatttggatacaaataatattagcttatgcgattcg
caaaaagaattgactgtaaaattgttgccaaagcgagcgagtagaattttgcgacagaca
ctgcgtgaacttgaggaattagcacaaacaccggttgtttcgtcgacaaatagcttggat
cgagattttaagcgaaaaatgcgcgaacaaagtcttgaacttcgaatacaggaagcattt
ttgagatttatggcatccattttacgtggatatcgagaatttttagtaccaatgtcaaag
gctccgactgttggctcaacagacccgaatgcgctctttcaattgaatgcatttttgcgt
tcgcgcgacaaggcccatcacaaattctataattacttaatgaaaacgcaaatgtttatt
cggtttatcgaagagcgttcatttgtcactgatagcggttatcaaggctatagcggtttg
gcctttttcgatgaatgcacagaaaaggtgagcgcatgtgatgataccacaagtgaaatt
cgattcgttgattgggatctcggtgcaagcagtgatcgaaccaaatacattctaccgttg
gattgtcaaccgggtgttaatgatgaaaaatacacatacccgatgttcgttttgaatccg
gcattattaaaaccgccgaaaaatcatctcaataaattgatacaaaatgcatcgatgcca
ccaggatcaccgatggcacggcgcacaaaatacgaaataaaaatggcacaaaaaaatgcc
agaaaatgtcaatcgtcaccagaacaatgggctaatcatttgttaacgacgtgctattca
atttatttccttgtgctgccgagcattttactcgatgcaaataacaatgaacaggccaca
ctgaaagctgcctacgatgtactgtcaaaggcacacaaaatgcgaattacctgtgatgaa
gtttgctatcgcatcatgatgcaattgtgtggcatacataatttacccatacttgcggta
cgattatactatcttatgaaacggtcgggcattcaaccgaatgcggtcacatatggattt
tataataaatgtgtgcttgaagctcaatggccatcggacacaggtaacgctagcaaattg
cgatggaatcgattgaaaaatgttatttttgcggcggcacattttcgtcgcagcacacaa
aatggcggtaaaaaatgctcattagaacaaaatttaagtgcattggatgcaaatgatgcc
acatcggcgaccagtttagatagagatacaaatgaaagtaattacttttcgatagacttt
tttgcttttgataaattacgcggacgatttggaaattttggacgtcaaagcgaacgaaat
gaatcgaatttaagagcaagcattggatcattgacatcggtcggtgcgaatgagaccaat
acaaagaatttaaatggtaatggaaaggaacacgaaattgatccacatacaaatcaaaga
attacagctgacaacattgaattgatcaaggaaccaagaccacccgaacaggatgaaaat
gattcacaaaacgaattcaatcaagttcaatcaagtgggaccaatggcacgtcgagccat
gaagacaaccatattataactaaggacaatattgatcttgctgttaatggcaacacagat
ggcgatggatatggagacgatgacgatgatgataagaatagcccaaagaaagtttcacca
cgaacaccagtcacacaaaatgatccgttgggtgcactggtggaagaagaagaggaactc
ataaaaatcgaaaagaccagcattgaaacgaaaaattcatttttaattaaaaacaacacc
atctatacggatcaaccgatcctattccgggggcaacgtagtgcaacatttgatgaatcg
acaccaatgtacaaaagtatgcatcggtcaaaaacgatgccaccatcatcagttacatca
agtcttgctggattcagccaatcattcaaacttaattttggacgttattcacctgcacga
ttgaatttcaaaaaagattccattattcctgcaaatattattgaaaatatctctaatatt
agcccgagtttgactggcaaaaaagagatgattcaaggtggtctcagtagcataaagagt
gccgccacatcagtggcaaagaaatttgatgaattcaaagatgcaatctcagcgaataac
acgcccatcaaatcgatcaatttggaccgtggccataatcgttccgatgataatttggac
gttgattcaccgacgtacacagcaccatcgcattctcggcgcgtttcaagtgacgttgat
ctatggagtcgattgagtgactcacgcaaatccagctgtaataatctcttattcctcggt
gaatatgcaaaactacaaaattcctatttacccgaaacaacaaatccacaaatatcgtta
gagcatcgatacagttcaaagtccgatgttgaaattcatttgagcacatgttcatcgtgt
cacaattgttccgaaacgttgacggataaagatattatggcgggctggtcggccgaagat
tcaaatctcaatacaacatgtcacaaatgtaaaaaagcaaccgtaccattgttaagcatt
catataaccagcattgatcgaacacaatccaatgaaaaacaaacggaccaaagtaatgta
ccctatttgaatccgttggtgttgcgcaaagagctcgaaaatattttaacacagcatggc
gatgatgttttatgtaaatcacaatttgttgacgtgcataacattatctattggaatttg
gtgtggttcatggaaaggatcggcgttcaaacacatttatcaaatttattctttcacaag
caaaataaagctgaccaaaaaccaccgcgagaaccttcacatccattggaatgcttatga
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