Contarinia nasturtii (swede midge): 116339806
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Entry
116339806 CDS
T08003
Name
(RefSeq) ribonuclease Z, mitochondrial-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cns03016
]
116339806
Enzymes [BR:
cns01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
116339806
Transfer RNA biogenesis [BR:
cns03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
116339806
Prokaryotic type
116339806
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
116339806
NCBI-ProteinID:
XP_031621722
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MQHLSKIIRHSKTINFYRKFTNDSKTSRKHSAKPVALNIIGAGSPSEEASLSISVENADR
YLFNCGEDSHRLFSDQSRKLSDLKHVFFTQNKWNCIGGISCLISELIKRHRWLPMFHGPK
QLYKCIKRILCLSCLSELDFRPIDCNPKNFFEDDTLRIDFLSIKANPTSTMDPHPRDVNE
ALTFVGEIKSPESEVPAYFMVLDLPTKQHLEAFVEKHQQAVVDKKFEIIVHFSAKKVIEY
SGYKRLLSNLNTKKHLYLNGNNEFSRLRSVYELQLKLNQIDKNVHPALKMPLNASTKACN
LSQEDKSDSQIFSKYYLTGSGEIDNDSTSSNDITSYDFDHCLDINRLKTFPKIVFLGTVS
AVPTKTRNNTSILLHTTRDDSMLIDCGEGTCAQIHRLYGKVAPSIIQKIRGVFISHMHND
HHTGLIELLQLRKKYLPSNRLPLLVLCPKSDMKSWLFFYDNNVEPIHDDLYFIDNENLMT
KMLSERYCNQLGVHMLQTCRVPHSNITYALSVKIGQQGNFKLTFSSDTTISNNLIAMGRD
STLLIHEATYPDKFAIKAEQNKHCTLSQAIEQSQQMNAKYTILTHFSARYGNGFPYIDSA
KYKNIGIAFDFMELIENDLHKLSSLNEEYQKLFK
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgcagcacttaagtaaaataattcgacattctaaaacaataaatttctaccggaaattt
acgaatgattctaaaacaagccgaaaacattcagcaaaacccgttgcattgaatataatt
ggtgccggatcgccaagtgaagaggcgtcattatctatatcagttgaaaatgcggataga
tatcttttcaattgtggtgaagactctcatcggcttttctctgatcaaagtaggaaattg
tcagatctaaaacacgtattttttactcaaaataagtggaattgcattggcggcatttca
tgtttaataagtgaattaattaagcgacataggtggttgccaatgtttcatggaccgaaa
cagttgtacaaatgcattaaacgaatactatgcttatcgtgtttaagtgaattagatttt
cgtccaattgattgtaatccaaagaatttcttcgaggatgatactttacgtattgatttc
ttatcgatcaaagcaaatccaacgagtacaatggatccacatccaagagatgtgaatgag
gctcttacatttgtgggtgaaataaaatcacccgaatctgaagtacctgcttattttatg
gttcttgatctgccaaccaaacagcatttggaggcgttcgttgagaaacaccaacaagcg
gttgtagacaagaaattcgaaattattgtgcacttttcagccaagaaagtcattgaatac
agtggttataagcgccttttgtccaacctgaacacaaagaaacatctgtacttgaatgga
aacaatgagttttcgcgcttaaggtcagtatatgaattacaattgaaactgaatcaaatt
gataaaaacgtccatcccgctttaaaaatgccgttgaatgcttcgacaaaggcgtgtaac
ttgagccaagaagacaaaagtgattcacaaattttctcaaaatactatctaacagggtct
ggtgaaattgataacgattcgacaagcagtaatgatattaccagctatgattttgaccac
tgccttgatatcaatcgtttgaagacttttccaaaaattgtgtttcttggcactgtatca
gctgttccaacgaaaacacgtaataatacatcgattcttcttcacacaacaagggacgat
tcaatgctaattgattgcggcgaaggaacttgtgcccaaatacatcgtctttatggaaaa
gtcgcaccgtcaattatccagaaaatccgaggtgtgttcatatcacacatgcacaatgat
catcataccggtttgattgagctattacaattgcgaaaaaaatatctaccatcaaatcgt
ttgccattattagtgctttgtcccaaatcagatatgaaatcttggttattcttctatgac
aataacgttgaaccaatacacgatgatctttattttatcgacaatgagaatttgatgacc
aaaatgttgtccgaacgatattgcaatcagttgggtgttcatatgcttcaaacatgtcga
gtgccacattcaaatataacctatgctctttcggtgaaaattggccaacaaggaaatttc
aaattaacgtttagtagtgatacaacaataagtaataatttaatagcgatgggacgtgat
tctacattattaattcacgaagcaacctatcccgataaatttgcaataaaagccgaacaa
aataaacattgtactctatcacaggctatcgaacaaagccaacaaatgaatgcaaagtac
acaatcctaacgcatttcagtgctagatacggcaatggctttccatacattgatagtgcc
aaatacaaaaatattggcattgcattcgattttatggaattaattgaaaacgatttacac
aaattaagttcactcaacgaggaatatcaaaaattattcaaatga
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