KEGG   Contarinia nasturtii (swede midge): 116339809
Entry
116339809         CDS       T08003                                 
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
cns  Contarinia nasturtii (swede midge)
Pathway
cns03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cns00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    116339809
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cns03009]
    116339809
Ribosome biogenesis [BR:cns03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    116339809
SSDB
Motif
Pfam: Utp12 WD40_Prp19 WDR55 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st WD40 Beta-prop_EML EIF3I WDR90_beta-prop_4th Beta-prop_TEP1_2nd Beta-prop_HPS5 Beta-prop_RIG_2nd Beta-prop_SCAP WD40_2 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_SPT8
Other DBs
NCBI-GeneID: 116339809
NCBI-ProteinID: XP_031621725
LinkDB
Position
Unknown
AA seq 620 aa
MATFQNTLHVSEHSADGKLYALLSFDGKLKVWNTETNELQREFVPNFHLNAPFTCFTWIT
VNGTLGPRKTPQKKSQRTTEYIALGTRSGGVSLYSYSKSEIECTLKGVGHQGSITAICRG
TNNVLFTCGDDCRVITWNLETGSQISSWEIGNEKPSSLVYLAESNRLVVAARQLYLWSVV
NQELEQTYTGHSSSVTMLKYFVIKSKEFILSASKADRILTLWRIKMSKKCPNSYSYLMED
IANSVATKVDDDKLEIAAVTRSGVLHYFGVDGLAKIEQIPCKPMKPTLTIEIANDSPQLV
EPIPICTVGMEIGRAQKKLQIGYGDRQVVRFELIEPDFNERRQVLIRSSSKSVTNDATTK
KRTTNALKTIAPIVNMESVEFQSKDVVPRKGKNNIEIPMETRLENLTFDSLGQSSAVGRN
VAQLLVQALHSHDANLLKMVFLNKDEQIIRATLKRLPPQYISSLIAELTALAQKKTIHVH
TSILWLKHLLQTQSSQLMAIGTIELYATFGPLLGIAEHRANTFQQLTKLSGRLDLLVNQI
KQNTDHDIIEDSDLLVYEDKDSSDEDGIPQEEESSDDQWEDGEEEDGVEGMEVCENGNDS
DMESDNGDDDDDGKDVNESD
NT seq 1863 nt   +upstreamnt  +downstreamnt
atggcgacttttcaaaacacattgcacgtgtctgagcattctgccgacggtaaattatat
gctcttttgagcttcgatggcaaattaaaagtatggaatacagaaacaaatgaattacaa
cgagagtttgtgccaaactttcatttaaatgcaccattcacgtgtttcacatggatcaca
gtcaatggcacgttgggaccgcgcaagacaccgcaaaaaaagtcccaacgaacaacagag
tacattgcccttggaactcgtagtggtggtgtcagcctgtattcatacagcaaaagcgag
atcgaatgtacattgaaaggtgttggacatcaaggtagcataacggccatttgtcgtggt
acaaacaatgttttgtttacatgtggcgatgattgtcgtgtgatcacatggaacttggaa
actggttcacaaatatcatcatgggagattggcaatgaaaaaccatcgagtcttgtctat
ttagctgaatcaaatcgtttagttgttgcagctcgacaattgtatctgtggtcagttgta
aatcaggagctcgaacaaacctataccggtcattcatccagtgtaacaatgttaaaatat
tttgttattaaatcaaaagaattcattttatcagcatcaaaagcagatcgcatacttaca
ttgtggcgaattaaaatgtcgaaaaagtgtccaaattcatattcatatttgatggaagat
attgccaacagtgttgcaactaaagttgatgatgataaattggaaattgcggccgttaca
cgaagtggtgtattgcattattttggtgtggatggtttggcaaaaattgaacaaattcca
tgtaaaccgatgaaaccaacgttgaccattgaaattgcaaacgattcaccacaattagtt
gaaccaattccaatttgtacagtgggtatggaaattggacgggcacaaaagaaattacaa
attggctatggtgatcgtcaagtggtacgatttgaattgattgaacctgattttaatgaa
cgtcgacaggtgctcattcgaagcagttcaaaatctgtgaccaatgatgcaacaacaaaa
aaacgtacaaccaacgcactgaagacaattgcaccgattgttaatatggaaagtgttgaa
tttcaatcgaaagatgttgtgccgcggaaaggtaaaaataatattgaaataccgatggaa
acacgattggagaatttaacatttgattcactcggacaaagtagtgcggttggacgaaat
gtggcacaattattggttcaagcacttcatagtcacgatgcaaatctattgaaaatggtg
tttttgaataaagatgaacaaattattcgagcaacactcaaacgtctacctccacaatat
atttcgagcttgattgccgaactcacagcattggcacaaaagaaaacaatccacgttcac
acatcaattttatggttgaaacatctgcttcaaacacaatcaagtcaactgatggccatc
ggaacaattgaattgtacgctacgttcggaccacttctcggaatcgctgaacatcgagca
aacacattccaacaactgaccaaacttagcgggcgattggatttgctggtgaaccaaatc
aaacaaaatacagatcatgacatcattgaagactctgatttgctagtgtatgaagataaa
gattcatcagacgaagatggaataccacaagaggaagaatcatcagacgatcaatgggaa
gatggagaagaggaagatggagttgaagggatggaagtttgtgaaaatggcaacgacagc
gatatggagagcgacaacggagatgatgatgatgatggaaaagatgtgaatgaaagtgac
tag

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