Contarinia nasturtii (swede midge): 116339809
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Entry
116339809 CDS
T08003
Name
(RefSeq) WD repeat-containing protein 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116339809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cns03009
]
116339809
Ribosome biogenesis [BR:
cns03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
116339809
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp12
WD40_Prp19
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
Beta-prop_EML
EIF3I
WDR90_beta-prop_4th
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_SCAP
WD40_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
116339809
NCBI-ProteinID:
XP_031621725
LinkDB
All DBs
Position
Unknown
AA seq
620 aa
AA seq
DB search
MATFQNTLHVSEHSADGKLYALLSFDGKLKVWNTETNELQREFVPNFHLNAPFTCFTWIT
VNGTLGPRKTPQKKSQRTTEYIALGTRSGGVSLYSYSKSEIECTLKGVGHQGSITAICRG
TNNVLFTCGDDCRVITWNLETGSQISSWEIGNEKPSSLVYLAESNRLVVAARQLYLWSVV
NQELEQTYTGHSSSVTMLKYFVIKSKEFILSASKADRILTLWRIKMSKKCPNSYSYLMED
IANSVATKVDDDKLEIAAVTRSGVLHYFGVDGLAKIEQIPCKPMKPTLTIEIANDSPQLV
EPIPICTVGMEIGRAQKKLQIGYGDRQVVRFELIEPDFNERRQVLIRSSSKSVTNDATTK
KRTTNALKTIAPIVNMESVEFQSKDVVPRKGKNNIEIPMETRLENLTFDSLGQSSAVGRN
VAQLLVQALHSHDANLLKMVFLNKDEQIIRATLKRLPPQYISSLIAELTALAQKKTIHVH
TSILWLKHLLQTQSSQLMAIGTIELYATFGPLLGIAEHRANTFQQLTKLSGRLDLLVNQI
KQNTDHDIIEDSDLLVYEDKDSSDEDGIPQEEESSDDQWEDGEEEDGVEGMEVCENGNDS
DMESDNGDDDDDGKDVNESD
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttttcaaaacacattgcacgtgtctgagcattctgccgacggtaaattatat
gctcttttgagcttcgatggcaaattaaaagtatggaatacagaaacaaatgaattacaa
cgagagtttgtgccaaactttcatttaaatgcaccattcacgtgtttcacatggatcaca
gtcaatggcacgttgggaccgcgcaagacaccgcaaaaaaagtcccaacgaacaacagag
tacattgcccttggaactcgtagtggtggtgtcagcctgtattcatacagcaaaagcgag
atcgaatgtacattgaaaggtgttggacatcaaggtagcataacggccatttgtcgtggt
acaaacaatgttttgtttacatgtggcgatgattgtcgtgtgatcacatggaacttggaa
actggttcacaaatatcatcatgggagattggcaatgaaaaaccatcgagtcttgtctat
ttagctgaatcaaatcgtttagttgttgcagctcgacaattgtatctgtggtcagttgta
aatcaggagctcgaacaaacctataccggtcattcatccagtgtaacaatgttaaaatat
tttgttattaaatcaaaagaattcattttatcagcatcaaaagcagatcgcatacttaca
ttgtggcgaattaaaatgtcgaaaaagtgtccaaattcatattcatatttgatggaagat
attgccaacagtgttgcaactaaagttgatgatgataaattggaaattgcggccgttaca
cgaagtggtgtattgcattattttggtgtggatggtttggcaaaaattgaacaaattcca
tgtaaaccgatgaaaccaacgttgaccattgaaattgcaaacgattcaccacaattagtt
gaaccaattccaatttgtacagtgggtatggaaattggacgggcacaaaagaaattacaa
attggctatggtgatcgtcaagtggtacgatttgaattgattgaacctgattttaatgaa
cgtcgacaggtgctcattcgaagcagttcaaaatctgtgaccaatgatgcaacaacaaaa
aaacgtacaaccaacgcactgaagacaattgcaccgattgttaatatggaaagtgttgaa
tttcaatcgaaagatgttgtgccgcggaaaggtaaaaataatattgaaataccgatggaa
acacgattggagaatttaacatttgattcactcggacaaagtagtgcggttggacgaaat
gtggcacaattattggttcaagcacttcatagtcacgatgcaaatctattgaaaatggtg
tttttgaataaagatgaacaaattattcgagcaacactcaaacgtctacctccacaatat
atttcgagcttgattgccgaactcacagcattggcacaaaagaaaacaatccacgttcac
acatcaattttatggttgaaacatctgcttcaaacacaatcaagtcaactgatggccatc
ggaacaattgaattgtacgctacgttcggaccacttctcggaatcgctgaacatcgagca
aacacattccaacaactgaccaaacttagcgggcgattggatttgctggtgaaccaaatc
aaacaaaatacagatcatgacatcattgaagactctgatttgctagtgtatgaagataaa
gattcatcagacgaagatggaataccacaagaggaagaatcatcagacgatcaatgggaa
gatggagaagaggaagatggagttgaagggatggaagtttgtgaaaatggcaacgacagc
gatatggagagcgacaacggagatgatgatgatgatggaaaagatgtgaatgaaagtgac
tag
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