Contarinia nasturtii (swede midge): 116339875 Help Entry 116339875         CDS       T08003                                  Name (RefSeq) heat shock protein 60A   KO K04077   chaperonin GroEL [EC:5.6.1.7] Organism cns  Contarinia nasturtii (swede midge) Pathway cns03018   RNA degradation Brite KEGG Orthology (KO) [BR:cns00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     116339875  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cns03019]     116339875    03110 Chaperones and folding catalysts [BR:cns03110]     116339875    03029 Mitochondrial biogenesis [BR:cns03029]     116339875   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:cns04147]     116339875 Enzymes [BR:cns01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.1  Enzymes altering polypeptide conformation or assembly     5.6.1.7  chaperonin ATPase      116339875 Messenger RNA biogenesis [BR:cns03019]  Prokaryotic type   Bacterial mRNA degradation factors    Other RNA degradation factors     Chaperones      116339875 Chaperones and folding catalysts [BR:cns03110]  Heat shock proteins   HSP60 / Chaperonin    116339875 Mitochondrial biogenesis [BR:cns03029]  Mitochondrial protein import machinery   Matrix    Other matrix factors     116339875 Exosome [BR:cns04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    116339875   Exosomal proteins of other body fluids (saliva and urine)    116339875   Exosomal proteins of breast cancer cells    116339875   Exosomal proteins of colorectal cancer cells    116339875   Exosomal proteins of bladder cancer cells    116339875 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Cpn60_TCP1 Aminotran_1_2 Motif Other DBs NCBI-GeneID:  116339875 NCBI-ProteinID:  XP_031621812 LinkDB All DBs Position Unknown AA seq 574 aa AA seqDB search MYRLPNVLRSAAARQLAVRSYAKDVRFGAEVRALMLQGVDVLADAVAVTMGPKGRNVILE QSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAK EGFEKISKGANPIEIRRGVILAVDAVKENLKKLSKPVTSPEEIAQVATISANGDKAIGDL IGEAMKKVGKDGVITVKDGKTLHDELEVIEGMKFDRGYISPYFINSSKGAKCEFQDALVL VSEKKISSIQSIIPALELANAQRKPLVIIAEDVDSEALSTLVVNRLKIGLQVVAVKAPGF GDNRKSTLQDIAISTGALVFGDDANLIKLEDVKVSDLGQIGEVVITKDDTLLLRGKGQKT DIDRRVEQIRDQIEETTSEYEKEKLQERLARLSSGVAVLKVGGSSEVEVNEKKDRVNDAL CATRAAVEEGIVPGGGTALIRSIPVLDGLKGKNEDQNTGIAIVKRALRMPAMTIASNAGV DGAVVVAKIETSPPEIGYDALNNEYVNMVEKGIIDPTKVVRTALTDASGVASLLTTAECV VTEIPKEEPAGGAPGMGGMGGMGGMGGMGGMGGF NT seq 1725 nt NT seq  +upstreamnt  +downstreamnt atgtatcgtttaccaaatgttttgcgttcggctgctgcccgtcaattggctgttcgttca tatgccaaggatgttcgtttcggtgctgaagtccgtgcacttatgttgcaaggagttgac gttttggctgatgctgttgccgtcacaatgggaccaaaaggtcgtaatgtgattttggag caatcatggggttcaccaaaaatcacaaaagacggtgtcaccgttgccaaaggcattgaa ttaaaagataaattccaaaatatcggcgctaaattggtgcaagatgttgcaaacaatacc aatgaagaggccggtgatggaaccacaactgctacagttttggctcgtgccattgcaaaa gaaggtttcgaaaagatctcaaaaggagccaatccaattgaaattcgtcgtggtgtcatt ttggctgtggatgccgttaaagagaatttgaaaaaactttcgaaaccagtcacatcaccc gaggaaattgcacaagtagccacaatttcggccaacggtgacaaagccatcggtgatttg attggtgaagcgatgaaaaaagttggcaaagatggtgtgatcactgttaaagacggcaaa actttgcacgatgaattagaagtgattgaaggaatgaaatttgatcgtggttacatttca ccatactttatcaattcatcgaaaggagccaaatgcgaattccaagatgctttggttttg gtttcggaaaagaaaatctcatcgattcaatcgattattccagcactagaattggcaaat gcacaacgtaagccattggtcatcattgccgaagatgtagacagcgaagcgctcagcaca ttggttgtgaaccgattgaaaattggccttcaagtggttgcagtgaaagcaccaggcttt ggtgacaatcgtaagagcacattgcaagacattgccatcagcactggagcacttgtgttc ggcgatgatgccaatttgatcaaattggaagatgtgaaagttagtgacttgggacaaatc ggcgaagttgttattacaaaagatgacacactattgttgcgcggtaaaggacaaaaaacc gatatcgatcgtcgtgttgaacaaattcgtgatcaaatcgaagaaaccacatctgaatat gaaaaggaaaaattgcaagagcgtttggcacgtttgtcatcgggcgttgctgttttgaaa gttggaggatcaagcgaagttgaggtcaatgaaaagaaagatcgtgttaacgatgctttg tgcgcaactcgtgctgctgtcgaagaaggtattgttccaggcggtggtaccgctttgatt cgttccattccggttttggacggcttgaagggcaaaaatgaagatcaaaatactggtatt gcaattgtgaaacgcgctttgcgtatgccagccatgaccattgcctccaatgccggcgtt gatggagctgttgtcgtagccaaaatcgaaacatcaccaccagaaatcggttatgatgcc ctcaacaatgaatatgtaaatatggttgaaaaaggcatcatcgatccaaccaaagtcgtt cgcaccgcattgaccgatgcatctggagttgcatcacttttgacaacagcagaatgtgtc gtcaccgaaattccaaaagaagaaccagccggtggcgccccaggaatgggaggcatgggc ggtatgggtggtatgggtggtatgggaggaatgggaggattctaa

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