Contarinia nasturtii (swede midge): 116339987 Help Entry 116339987         CDS       T08003                                  Name (RefSeq) protein Gawky isoform X1   KO K18412   trinucleotide repeat-containing gene 6 protein Organism cns  Contarinia nasturtii (swede midge) Brite KEGG Orthology (KO) [BR:cns00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cns03019]     116339987    03036 Chromosome and associated proteins [BR:cns03036]     116339987 Messenger RNA biogenesis [BR:cns03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      116339987 Chromosome and associated proteins [BR:cns03036]  Eukaryotic type   Gene silencing    piRNA pathway     116339987 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  M_domain UBA RRM_occluded RRM_1 UBA_DHX29 UBA_7 Motif Other DBs NCBI-GeneID:  116339987 NCBI-ProteinID:  XP_031621947 LinkDB All DBs Position Unknown AA seq 1714 aa AA seqDB search MRYNNSFTNNVLLHMSESKDNKKTNSKHRLISTTSDTIITANKNTQTDMKSEYAFKEKLK KFKASFNRDTVNDTDDDVDNDHLTTIKRNQVTGVDADVDSAAIDKFDIDDEPFTTQLQTP ETIEKKPIDGSEQIKMMQQINDDNNDSITLKLLWPPKQLQFNQSDVLPDNKKLSKMVHNN KMYQIIRDNNSIKSKHILNATDTFCDNYKNELNVAKSDNMAAQSVADTRTAVTTSMANDT TAKTTNSTTYNNCNRYEHEVQEQSIGDKPTVNANNKLPSSSTSNVNTSVLHISFENLIKL IDSEPRRIREWNAKSSIDATRFLRLCGGGEQGINNGTTGWGSPPSAPSAAPGGNNANTSS WGSNQPQQQWDQPSGSNAAVNVNAANANVGQNTTMWPPTTGANSGSQQSHEQIQNASKAQ GQPQQAPAQQSQSQQAAGSNNNNNVISASGSNNPGNNNSASGLIGGGTSTAAAKNQLEQL TTMRDALFSQDGWGCQHVNQDTNWDVPGSPEPMTGGNIVKADPTQSVAQASATAATPWKP NINNGTELWEANLRNGGQPPAPAVQKPWGHTPSTNLGGTWGEDDEGADSGASSSVWATQS NAPAQQWNQPSVSNAGVNVNASNANVGQTSAMWPPAAGANPATTTTTPLQPPQIVNPVLG GQDVRNVGANQMDIRNADPRDIRLSNGPHFNIPMAHPRDPTRDLLREISRDVRGDLRGIS GRLNGTSEMWGQHHNLTQGVNQQTAQQPQAQQSQQPQSQHGQMPMKTDKPPTGWEEPSPP TQRRNIPNYDDGTSLWAPSQQAPQQTNQQQNAQQQPVPLPQNRGWPKGGRSSWDEPVTGS GSTTPQLPQSRIIPSGLPSGLPSGLKQDGSMWNQAPNNAGRTTSWDEHSVVSGVNDKNAA INANTGGGWDNQTPNVWQQQQQQQQQQQQQQQQQQAQQQQQQKNKLMGLDRNSTSKASSG VSSYRMLFDMGFKKEEIELALRATNLNLDEAIEILNQSRSANSIDAWRRHDEHNASAGNF DHNSFPQRYPGGPQPTMPFQSNNPNLLNAIGVSGVSTNPGLNAIGNMQPMQAQKYLNQGA HNASGTGSGFNQGINQTLNAGNSGNTTQAAGQPSTQQLRMLVQQIQMAVQAGYLNHQILN QPLAPTTLVLLNQLLAHIKQLQVNQANMSRGINNIPMTLNISKLKQQIATLQNQIAQQQA AYVNKQPGAQCNHNISGNGNVGIGAGIGIANIGNVANAGVGPSPNDYLRSQHDPINTLQG SFSDMSIAKEPPNSFQNSSGQQSRLNQWKLPNFDKEGGADNTTDFSRAPGTTSKSTMSTS NSVIGSLGGLQDATWSSGRNISDGWPDSTPDSENKDWPSSQQSPSAAFTDLVPEFEPGKP WKGSQMKTIEDDPSITPGSVARSPLSISAAKDTDLFASSSKTSPTDIPPLSLSSSTWSFN PTGSSSQPHFTSSKGSNWSEGVSHQMGNQSELWSSPMTNKTARGPPPGLGNNNKGNLTGA NAITSTATSSSTNGWIGGNLRLSSGSWPSTWLLLKNMTAQIDGSTLRTLCMQHGPLQHFH LYLNHGIALCKYSTREEANKAQMALNNCVLGNTTICAESPCESEVQNILQHLGVPTNQQP PAPQQQPQSQNPQQSQQPQPGQQTSAASLSSQWRPSSQNTQNRSSGSDTWGAGSVVWPST NPAGNFWTGLDATSTERGTPSSLLPENLLGNELN NT seq 5145 nt NT seq  +upstreamnt  +downstreamnt atgagatacaataacagctttacgaataacgtattactacatatgtccgagagcaaggat aataagaaaactaatagcaaacataggttgatatcaactacttcggatacaataattacg gcaaataaaaacactcaaaccgacatgaagtctgaatacgcttttaaggaaaaacttaaa aaatttaaggctagttttaatcgagacactgtgaatgatactgatgatgatgtcgataac gaccatttaactacgattaagagaaaccaagtcaccggcgtcgatgcagatgttgacagc gctgccattgataaatttgatattgacgacgaaccattcacaactcaattgcagacgcca gaaaccatcgaaaagaagccaatcgatggtagtgagcaaatcaagatgatgcaacaaatc aatgacgacaacaatgattctattactttaaagttactctggccaccaaaacaattgcaa ttcaatcagtctgatgtcttgcctgataacaaaaaactatcaaagatggttcataacaat aaaatgtaccaaataattcgcgataataatagtattaagagtaaacatattttgaacgct actgataccttttgtgataactacaagaatgaactaaatgttgctaagtctgataatatg gcggctcaaagtgttgctgatacacgaaccgctgtaactacttcaatggcaaatgatact actgcaaagactacgaattctactacgtacaataattgtaatcgatatgagcatgaggta caagaacaatcaattggtgataagccaactgtgaatgcaaacaataagctgccatcgtca tcaacgtccaacgttaatacaagtgtattgcatatttcatttgaaaatcttatcaaatta attgattccgaacccaggcgcattcgtgaatggaatgcgaaatcgtcgattgacgcaaca cgctttctgcgtctctgcggaggtggtgagcaaggtattaataatggtaccactggttgg ggatcacctccatctgcaccaagcgcagcgcctggtggaaacaacgcaaatacaagttct tggggttctaatcaaccacaacaacaatgggatcaacctagtggctcaaatgcagctgtt aatgtaaatgcagctaatgctaatgttggacaaaatacaactatgtggccaccaacaact ggcgctaattcaggttcacagcaatctcacgaacaaattcaaaatgccagcaaagctcaa ggtcaacctcagcaagctcctgcccaacaatcacaatctcagcaagctgctggcagcaat aataacaataacgtcattagtgcaagcggaagcaataatcctggaaacaataatagtgct tctggtctaatcggaggtggaacctcgacagcagctgcgaaaaatcaacttgaacaattg acaacaatgagagatgctttatttagtcaagatggttggggctgtcaacatgtgaatcaa gatacaaattgggacgttccaggatctcccgagccaatgactggtggaaacatcgtaaaa gccgatccaactcaatctgtagctcaagctagtgctacagcagcaactccgtggaagcca aacattaataatggtactgaattatgggaagcgaatctccgtaatggtggacaaccacct gctccagctgttcaaaagccttggggtcatactccatccacaaatcttggtggtacttgg ggagaggacgatgaaggtgccgattcaggtgcatcctcaagtgtttgggcaacacaatcc aatgcaccagctcaacagtggaatcaaccaagtgtttcgaatgcaggtgtaaatgtaaat gcatctaatgcaaacgttggccaaacctcagcaatgtggcctcctgcagctggggcgaat ccagcaactactactacaacgccactacagcctccacaaattgtgaatccggttttaggt ggacaagatgtacgcaatgtgggtgccaatcagatggatataagaaatgcagatccacgt gatattcgtttatctaatggtccgcactttaacattccaatggcacatccacgtgaccca acaagagatttactgagagagatttctagagatgttcgtggagatctacgtgggatctca ggtcgtttgaatggaacgtctgaaatgtggggacaacatcacaatttgactcaaggtgtc aatcaacaaaccgcacagcaacctcaggcacaacaatcacaacagccacaatcacagcat ggtcaaatgccgatgaagacagataaaccaccgaccgggtgggaagaaccgtctccgcct acacaacgacgtaatattccaaattacgatgatggaacatcgttgtgggcaccatcacaa caagctccacagcaaacaaatcaacagcaaaatgctcaacagcaacctgtgccattacca caaaatcgaggttggccaaaaggtggcagaagctcatgggatgagcctgttaccggatca ggatcaactactccccaacttccacaaagtcgtatcattccgagtggactaccaagtgga cttccaagcggacttaagcaagatggttccatgtggaatcaagcaccaaataatgcagga cgcacaacttcatgggacgaacactccgtcgtttctggtgttaacgacaaaaatgccgca attaatgcgaatactggtggtggttgggacaatcaaacaccaaacgtttggcaacagcag cagcagcagcagcagcagcagcagcaacaacaacaacaacaacaagctcagcaacaacaa cagcagaagaacaaactcatgggacttgatcgaaactcaacatcgaaagcatcatcagga gtttcatcttatcgaatgttgtttgatatgggcttcaagaaggaagaaattgaactagca ttacgggcaactaatcttaacttagatgaagccattgagattttaaatcaatctcgttca gctaatagcattgacgcatggagacgacatgatgagcacaatgccagcgctggtaacttt gatcataatagcttccctcaacgatatccgggtggaccacagccgactatgccatttcaa agcaacaatccaaatttgctgaacgctattggtgtgagtggggttagtacaaatccaggt ctaaatgctattggcaacatgcagccaatgcaagcacaaaaatacttaaatcaaggcgca cacaatgcttcaggcaccgggagcggatttaatcagggtattaatcaaacattgaacgca ggaaattcaggtaatacaacacaagctgcaggtcaaccatcaacgcaacagttacgcatg cttgtgcaacaaattcaaatggctgtacaggccggttatctgaaccaccaaatccttaat caacctttagctccgaccactttggtactgctcaatcaattgttagcacacattaaacaa ttgcaagtaaaccaagcaaacatgagccgcggtatcaataacattcccatgacgttgaac atatcgaaattgaagcagcaaattgccacattgcaaaaccaaatagcacagcaacaggcc gcctatgtgaataaacaacctggtgctcaatgcaatcataacattagtggaaacggtaat gttggtattggtgctggtataggaattgcaaatatcggcaatgtggctaacgctggagtt ggaccatcgccaaatgattacttgcgcagtcaacatgatccaattaatacattgcagggt tcattttctgacatgtctatagctaaagaaccaccaaatagcttccaaaactcgagcggt caacaatctcgtttgaatcaatggaaactaccgaatttcgataaagaaggtggtgctgac aatactactgatttttctcgtgcaccaggcacaacatccaaatcaacaatgtctacatcg aattcggttattggatcactaggtggtttacaagatgcaacatggtcttctggtcgaaac ataagtgacggttggcctgattcaacaccagatagtgagaataaagactggccatcatcc caacaatctccatcagcagcattcaccgacttagttcctgaattcgagcctggaaagcct tggaagggttcgcaaatgaaaaccattgaggatgatccaagtatcacaccaggtagtgtt gctcgcagtccattatcgataagtgccgcaaaggatactgatttgtttgcaagtagcagc aaaacttcaccaaccgatataccaccgttaagtttatcgtcttccacctggagtttcaat ccaaccggttcatccagtcaaccacatttcacaagttctaaaggcagtaactggtccgag ggcgtgtcacatcaaatgggtaatcaatctgaattatggagctcaccaatgacaaacaaa acagcccgtggacctccacctggcttgggtaataataacaaaggcaatcttacaggtgct aatgcgataacttcaactgcaactagttcaagtacaaatggctggattggtggtaattta cgtctaagttcaggatcatggccatcaacatggctacttttgaagaatatgacagcccag attgacggctctacattgcgtacattatgcatgcaacatggtccattacaacatttccat ttgtatttaaatcatggcatagctttatgtaaatattcaacgcgtgaagaagctaataaa gcgcaaatggcattaaataactgtgtgttaggaaataccacaatttgcgctgaatcgcca tgcgagagcgaagttcaaaatatcttacagcatttgggtgtaccaaccaaccaacaacca cctgcgccacaacagcaacctcagtcacaaaatcctcaacaatcacagcaaccacagcca ggacagcaaacatcagctgcttcattatcctcgcaatggcgaccatctagtcaaaatacg cagaaccgttcctcgggctcagatacttggggagctggttcagtagtatggcctagtact aatccagctggaaacttttggaccggattagatgctacttcgactgaacgtggtactccg tcttcacttttacctgaaaatttacttggcaatgaattaaattag

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