Contarinia nasturtii (swede midge): 116340022
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Entry
116340022 CDS
T08003
Name
(RefSeq) semaphorin-1A
KO
K06842
semaphorin 6
Organism
cns
Contarinia nasturtii (swede midge)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
116340022
NCBI-ProteinID:
XP_031622015
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Position
Unknown
AA seq
950 aa
AA seq
DB search
MEYLPSVKQMAVYAWCTVLVILSMFIVEHSSNAQAWTQDIQPTLKIKYEQKWPVFFGNQS
DYFQILEQDDNSVLIGARNAMYNVSLKNLLENQSQRLEWESTPAHRELCTLKGKQDSDCQ
NYIRVFARIDDHKIMVCGTNSYKPLCRRYKIGGGGSMISTASHEDESAEVEVSTTSENAV
APASSSTETETASLTKNSSGETFEMIEEIDGQGRCPYNPTHNSSYIFTDGQLYSATAADF
SGGDALIYRETQRTEQFNAKQLSQPSFVSTLERNGYVFFFFRELALENCGKTIYSRVARV
CKNDRGGPSPFRERWTSYLKTRLNCSTPGDFPFYFDELQGTTGIIDGLYQAALNQKQQIR
NYHTHSRAEDSGKSSALKPNSLIYAVFTTPQNAIPGSAVCAFQIDDIIDTFEGNFKGQKD
ATSNWLSIPASEVPDPRPGKCVDDSRELPMRTVNFVKMHTLMESSVPALYGRPVLTRVAA
KNRFTAITTDAQVEALNGDKYDVLFIGTDNGHVIKTIHFLRSASNDSKANQNGSGEQQQQ
ESESTLETIVVSETQAFSRSLPVKQMTVAKEQQSLVVVGTGMIVSIPMHHCSHKVSCKEC
LNLRDPYCVWDTKNHECTSIKSVSSHNRKNFIQNIRQSRKETTEMCGDDNENRIDAPVPK
EKGRSLSTTGNVQTNLVTGSEKPVAQPSVVSTRGTVSSVFRGPSTTNDSNKLPDERENEV
QPENQIGSHFDEFSADNGFDNDDSSETGVVESRNFDAVHSSNSNQMRFASPLFATVVFIV
FAIAFAFGFIVSKRFEFTQSAFDILRGGSGGSGSSHHHLSEHHRNQLNFYDKSTGGGRNA
SCKDVNLLMNVMGPYIAAGGPNNVNGRSTLTNTGCQTPNNLDKKDILELEFETKDRSHEC
KNSTEHLDINDLKVNANNNTNCNNQTTTPQAVIVNSTNTGTLQKVKKTYL
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggaatatcttccaagtgtaaaacaaatggcagtgtacgcatggtgtacagtgttggtg
atcctgagcatgtttatcgtcgaacatagcagcaacgctcaagcatggacacaagatatt
caaccaacacttaaaattaaatatgaacaaaaatggccagtatttttcggcaatcaatcc
gactactttcaaattttggaacaagacgataattcggttctgatcggagcacgaaatgca
atgtacaatgtaagtttaaagaatttactggaaaaccaatcgcaacggttggaatgggaa
tcaacgccagcccatcgtgaattgtgcacattgaaaggaaaacaagactcggattgtcag
aactatattcgtgtgtttgctcgaattgatgatcacaagataatggtgtgtggtaccaat
tcatataagccattgtgtcgacgatataaaattggtggtggcggttcaatgatttcgact
gcatcacatgaagatgaatcggccgaagttgaggtatcgacgaccagtgaaaatgccgta
gcgccagctagctcatccactgaaactgagacagcatcattgactaaaaattcatcgggc
gaaacatttgaaatgatcgaagagatcgatggacaaggacgatgcccgtataatccaaca
cataatagctcgtacatttttacagatggtcaactatactcagcaacagctgccgatttt
tcgggcggtgatgcgttgatttatcgcgaaacacaacgcaccgaacaattcaatgcaaag
caactgagtcaaccgtcatttgttagcacacttgaacgcaatggatatgtatttttcttt
ttccgtgaattggcattggaaaattgtggaaaaacaatttattcaagagtggcacgcgtt
tgtaagaatgatcgtggtggtccatcaccattccgtgaacgttggacatcatacttgaaa
acacgacttaactgctccacaccaggagattttccattttatttcgatgaacttcaggga
acaactggcattattgatggattatatcaagccgcattgaatcaaaagcaacaaatccgc
aactatcacactcattcaagggccgaagactctggcaaatcgtctgctttaaaaccaaat
tcattgatttatgccgtatttacaacgccccaaaatgcaattccaggctctgccgtttgt
gcctttcaaattgacgacataatcgatacattcgaaggtaatttcaaagggcaaaaagat
gcaacatcgaattggttatcaataccagcgtcagaggtaccagatccacgtcccggtaaa
tgcgttgatgacagtcgtgagctaccgatgcgaacggtcaactttgtaaaaatgcacact
ttgatggaatcatcagtgccagcgttatatgggcgacccgtactgactagagttgctgca
aagaatcgattcaccgccattacaaccgatgcacaagttgaagctctcaatggtgataaa
tacgatgttctattcattggaaccgacaacgggcatgtgattaaaacgattcactttttg
cgctcggcgtcaaacgatagcaaagccaatcaaaatggttcgggcgaacaacagcaacaa
gaatccgaatcaacattggaaacgattgttgtgagtgaaacacaggcattctcccgtagt
ttgccggttaaacaaatgaccgttgcaaaggagcaacaatcgttggttgttgttggtact
ggtatgattgtgtctattccgatgcatcattgttcgcacaaagtttcatgcaaagaatgt
ctgaacttacgcgatccgtattgtgtgtgggatacaaaaaatcatgaatgcacatcaatc
aagtcggtgtcatcgcataatcgcaagaattttattcaaaatattcgacaatcacgtaaa
gaaaccactgaaatgtgcggcgatgacaatgaaaaccgtattgatgcaccggttccaaag
gagaaaggacgaagcctgtcaacaaccggaaatgttcaaacaaatcttgtaactggtagc
gaaaaaccggttgctcagccaagtgttgtgtcaacgcgtggaactgtttcatccgtattc
cgtggaccatccacaacaaatgatagcaacaaattgcccgacgaacgagaaaacgaagtt
caaccagagaatcaaatcggttcacatttcgatgaatttagcgccgacaatggatttgac
aatgatgacagcagtgaaacgggtgttgttgaatcacgaaactttgatgctgttcattcg
agcaattcaaatcaaatgcgttttgccagtccattatttgctacggtcgttttcattgta
ttcgccattgcttttgcatttggttttattgtatcgaaacgattcgaattcacacaatcg
gcattcgatattttgcgtggtggtagcggtggaagtggcagtagccatcatcatttgagc
gaacatcatcgaaatcaattgaatttttacgataaatcgaccggcggtggtcgaaatgcg
agttgcaaagacgttaatctactgatgaatgtcatgggcccatacattgcagccggtgga
ccaaataatgtaaatggccgttcaacactcacaaatactggctgtcagacgccaaataat
cttgacaaaaaagatattcttgaattagaattcgaaacgaaggaccgaagtcatgaatgc
aaaaattccaccgaacatttggacatcaatgatttaaaagtgaatgctaataataacaca
aattgtaataatcaaacgacaacaccacaagcggttattgtgaattcgacaaataccgga
acactgcaaaaggttaagaaaacctatctgtag
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