Contarinia nasturtii (swede midge): 116340091
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Entry
116340091 CDS
T08003
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cns02000
]
116340091
Transporters [BR:
cns02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
116340091
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
116340091
NCBI-ProteinID:
XP_031622168
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All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
MTEGATSVSCLDETIHHKSSLAPDESIELPALRNPSDAHTQEKQQDKKIKVALPDRGSWS
NKLDFILSVVGLAIGLGNVWRFPYLCYKNGGGAFLVPYFITLTLAGIPMFFMELALGQML
TIGGLGVFKIAPIFKGIGYAAAVMSCWMNVYYIVILAWAIFYFFMSLRSDVPWRTCNNLW
NTRTCVNPYERNSLLCWNSSIPFNTTAQETVKMCSLAGSNFTNTELTDPVKEFWERRALQ
ISSGIEEVGGIRWELAATLLVVWIMCYFCIWKGVKWTGKVVYFTALFPYFLLTILLIRGI
TLPGAIEGIKFYVIPNFSKLTEAQVWIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVYKD
ALIVCTVNSSTSMFAGFVIFSVVGFMAHEQQRSVADVAQSGPGLAFLAYPSAVLQLPGSP
IWACLFFFMLLLIGLDSQFCTMEGFITAVIDEWPRLLRRRKEVFIAIVCFLSYLVGLTCI
TQGGMYVFQILDQYAVSGFCLLFLIFFECVSISWAFGVDRFYDGIKEMIGYYPMKFWKFC
WCYTTPFICVSVFIFNIVQWKPIKYLSYEYPPWAHAFGWFTALSSMLCIPGYMLWLWFKT
PGDRAAKIRQIVRIDDDVKTLREKMVIEQQKLNEVYL
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgacagagggtgcgacatctgtatcatgtttggatgagacaatacatcataaatcatca
ttagcgccggatgaatcaattgaattgccggcattacggaacccttcagatgctcatact
caggaaaagcaacaagataagaaaattaaggtagcactgccagatcgaggatcatggtca
aacaaactagatttcatattgtcagtggtcggtttggctattggtctgggcaacgtatgg
cgtttcccttatctttgctataaaaatggtggcggtgcatttttagttccgtactttata
acgctgacattagctggtataccgatgttttttatggaattggcactaggacaaatgcta
acgataggcggtttaggtgtattcaaaattgcacctatcttcaaaggaattggatacgct
gctgccgtgatgtcatgctggatgaacgtatactacatcgttattttagcttgggcaata
ttttatttcttcatgtcgcttcgttcagatgttccatggcgtacatgcaataatttgtgg
aatacaaggacttgcgttaatccatacgaacgaaattcattactttgttggaatagttcg
atccccttcaatacaactgcccaagaaaccgtcaaaatgtgttcattagctggatcgaat
tttaccaacaccgaactaaccgatccggttaaagagttctgggaacgtcgtgcattgcaa
atttcgagcggtatcgaagaagttggtggtattcgttgggaattggccgcaacgcttttg
gttgtttggattatgtgctacttctgcatttggaaaggtgtcaagtggactggaaaagtt
gtctactttaccgcattgttcccatactttttattgacaatattgttgattcgtggaata
acattaccaggtgccattgaaggaattaaattctacgttataccgaacttttcgaagtta
acggaagcacaggtgtggatcgatgccgttactcagatcttcttctcatatggattgggt
cttggtacattggttgctttgggcagctataataaatttacgaacaatgtttataaggat
gcattgattgtgtgcacagtgaattcaagtacaagtatgtttgctggatttgtcattttc
tccgtggtcggttttatggcacacgagcaacaacgatcagtagctgatgtggcacaatct
ggtcctggtctagcattcttggcctatccatccgctgttctacaattgcccggctcacca
atctgggcgtgcttgttcttctttatgttgctactaatcggtttggactcacaattctgt
accatggaaggttttattacggccgtcatcgacgaatggccacgactacttcgtcgtcgc
aaggaggtgttcattgcaatcgtttgcttcctcagctatttagttggtctgacatgtatc
acacagggcggaatgtatgtcttccaaattttggaccaatatgcggttagcggtttttgc
ttgctcttcctaatattcttcgaatgtgtatcgatttcttgggcatttggagttgatcgc
ttctacgatggtatcaaggaaatgattggatattatccaatgaaattctggaaattctgc
tggtgctatacaactccattcatttgtgtgtccgtgttcattttcaacattgtccaatgg
aaaccgatcaaatacttaagctatgaatatccaccttgggctcatgcattcggatggttt
acagccttgtcatcgatgttatgcatacctggttacatgctttggttgtggtttaagact
cctggtgacagagctgcgaaaattcgacaaattgttcgaatcgacgatgatgtgaaaacg
ttacgagagaagatggtcatagaacaacaaaagctgaacgaagtttatctgtaa
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