Contarinia nasturtii (swede midge): 116340107
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Entry
116340107 CDS
T08003
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cns03009
]
116340107
Ribosome biogenesis [BR:
cns03009
]
Eukaryotic type
90S particles
Other 90S particles
116340107
Pre-60S particles
Other pre-60S particles
116340107
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Kelch_2
WD40_like
Motif
Other DBs
NCBI-GeneID:
116340107
NCBI-ProteinID:
XP_031622200
LinkDB
All DBs
Position
Unknown
AA seq
454 aa
AA seq
DB search
MEEEQIEQDQAVVNFIPCISFVKRGVAKENPDKVTLTREELARVISSTKKELDDEENEDD
DDENDENMDTSDGVEPQSRNPDDEFNFADYDEEDATQVAAVSDIAVVDPDEHISDGEDSE
AEDDLIKPTDNLLLVGHVDDDASSLEVYVYNEEENSFYVHHDFLLPSFPLCIEWMNYDPE
SKDNGNMCAIGCIDPIITIWDLDIQDTLEPAVKLGSKGKRKKGIEKFGHTDAVLDLSWNT
NFPHILASGSVDQSVILWDLDELQPHTTIRAFQEKVQSIKFHPTEAQMLLTGSCDGTVKL
FDCRDPSEIDTSFKQWSFTGTEVERVYWNPHNTNYYFVGLNNGFIHYCDIRQEGNSIWNI
QAHSDEISGILVNHMQDGMLTTTSADGVLKVWRYNSSTAPTLIHENEVGIGRIQCADISY
DNGFTLAVGGDNKQKQLRVIDVRDFEVVKRQFNA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaacaaattgaacaagatcaagcggtcgtcaactttattccctgcatatcg
tttgtgaagcgtggtgttgccaaagagaatccagacaaggtgactttaacgcgagaagaa
ttagccagagttatttcgtctacaaaaaaagagttagatgacgaggaaaatgaggacgat
gacgacgaaaacgatgaaaatatggacacttctgatggtgtcgaaccacagtcacgaaat
ccagacgacgagttcaattttgccgactacgatgaagaagacgcaactcaagtggctgca
gtgagtgatatagctgtcgttgatccggatgagcacatcagtgacggagaagattcagag
gctgaagatgatctcatcaaaccgacagacaatttactacttgttgggcacgttgatgac
gacgcttcatcgctggaggtgtacgtttataatgaggaagaaaacagtttttatgtacat
catgattttctgttaccaagttttccactttgcattgaatggatgaattatgatccagag
agcaaagataacggcaatatgtgtgccatcggttgtattgatccgatcatcacaatttgg
gatttggatattcaagacacgctcgaaccggctgttaaattaggttcaaaaggcaaacga
aaaaagggcatcgaaaaatttggacatacagatgctgtattagatttatcttggaataca
aattttccacacattttggcaagtgggtccgttgatcagtctgtaattttatgggattta
gacgaattgcagccacataccacaattcgtgcattccaagaaaaagtgcaatcaattaaa
ttccatccgaccgaagcgcaaatgctattgactggcagttgtgatggtactgttaaattg
tttgattgccgtgatccaagcgaaatcgatacgagtttcaaacaatggtcattcactgga
accgaagtggaacgggtctactggaatccacataatacaaactactattttgttggccta
aacaatggtttcattcactattgtgatattcgtcaagagggcaacagtatctggaatata
caagcacacagtgatgaaatcagcggcattctcgtcaatcatatgcaagacggtatgctc
accaccacatcggccgatggtgttctgaaagtatggcgatataattcaagcacagctcca
acattaattcatgaaaatgaagttggcatcggtcgtattcaatgcgcagacatttcttat
gacaatggatttacgttggccgttggcggtgacaacaaacaaaaacaacttcgtgtcatt
gatgttcgagatttcgaagttgttaagcgacaatttaacgcataa
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