Contarinia nasturtii (swede midge): 116340198
Help
Entry
116340198 CDS
T08003
Name
(RefSeq) uncharacterized protein LOC116340198 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cns04131
]
116340198
Membrane trafficking [BR:
cns04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116340198
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
PH_16
RGS-like
PDZ
C1_1
PDZ_6
PH_13
RGS
PDZ_2
C1_2
PH
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
116340198
NCBI-ProteinID:
XP_031622384
LinkDB
All DBs
Position
Unknown
AA seq
2123 aa
AA seq
DB search
MDSTSQPGLPERSQGGGTYLNGASHRRPQTLMSPVGVERNKNDKIELTITIQKDASGYGM
KVSGDKPVFVESVKTGGAAHMAGLMEGDMIVKVNGEEAKTLNHTKVVHLIKDKSPVILTV
SRVQTKMQRSSSISVGTPTSLNQRAPITAPLPVDSSTRREVEFTRINTLRLMMDQEKKNL
ENLKTSNNANRNDIAQAETNILRLQEQLRQMHGEDPTLLHFNPITPSTLLNVTAPIINPS
TVQSSITPAFLSRFPRSLSSLSLGGKKKSIDKEMANSSLTTPNTSGNADHLLHSPVSAAA
AAAGLHHHSSHNALLSAVKNKFTSESTPVELRPGFVDKNRSKNQHQPPPLPLRNFPRRSQ
PAPSPATADGIDVGDNLIDLTTSPSSAGVKKKGKSTSADIDNKTNNNDKASKSSSSSSNS
SLSAATSAANKVKKRSKAKIKANSDPKISAQLFIQMEQREYDKQDLIAATGHSIANEPPP
LPPRQPGMLEENQNFINNNKCGSNAAQQQRPPSNSLETRMNYPLIATATAVRDNISPFPL
SNRPNIRQRLQQSNTHQHALGLTPHQINQLNNTSPHRRVVSSPEQHLHSRDSDTFDDETT
PPGTPPPPYKNKTKSTSDAKQHPMVPKRNYFQSTPCSNDSVQNNPNAHNLSEHDEFMLNE
SIFNTSTSSATSFGANGSNISAAQANILQRQIISMEDDELVDDQDSISDDHGPFKSLQQL
IEPENSLYLAVFLNFVLSNSNPSQLLFYLITGLYKEGTVKDMRKWAYEIHSTFLVPRAPL
MWEGVDESLAREVDNVLQNEHDKGEILRKIFYKGRARAKECIVQQLAEFQTKRTAGLGTM
FGPSDQQLHEAKGDKVREQRIVEETLLPKLQQLVDDLEKDASNECPKKMALSSALSTVLH
RTFLITRSTPGGPIERVHHFVSREKSFKSRLIGKNRKIMVRGHHLVLKQYYEVAHCNHCQ
NIIWGVSPQGYHCTNCELNIHRACSRILEESCPGPVPTKNDKMSKFIEKIRPTHYFNPAE
RSRRQEDECGDDLLQVDRPSQASVVRQPSDRRSDPNNSLNSTAQSNHPTTNEFNTSHSID
NETSIHEVDNENRDSTKSKSAPVSVNRSESYKERLSHKRNHRNNRRKISDPSLSSKSNED
QHVDLGINNTNFTASSSSSLSSSLGSNSPSLEAVSTPIGHQVASCAPRQWVDSEDEGGDQ
EADWSSHVSPDILQTLSDTEKRRQEIINEIYQTERNHVRTLRLLEGIFMRPLQDSSALTV
EHFNLLFPPSLLVLKDLHRNFKQQLEQRRGDQEPLVEEIGDLLLSMFDGNAGDQLREHAA
SFCARQKIALEALKEKRRKDAKLQQLLTEAESHKACRRLQLKDLLPTVLQRLTKYPLLFE
SLAKISIKVAPDNEKETQAIQRARELSRRILDHVNQAVREAEDTHTLQTIQKRLDKSLYE
KEPNNEFKHLDLTQHKLIYEGTLTHKKQPQEQLHGLLFETMVVLLHKKDDKYILKHLVSP
GSTGGESKNEIRFNPITKINLILVRQSAVEKNSFYLINTNVTQMLELTAPSALECKTWFN
HISAAAEAYKQRTKSNHDITPVEDPSSVTIPSSATTKETAADHEFVTSGTTSGLTASNSI
ATADTAHNQSLDGQKDTARHNTSNDGEAFDREHDYININGSGARATAKSEEDVCDKANRK
SELFSNNSNNTRTLTQQSSLVAPSEVHISISPALTAEPVLTPNERLRRLDESIRLTLSEK
QKIVCDIFRVPNEHFSAIADIAGQPEAPKEPSDLLLAAFAQVQSLTEALNEYIKIPQIQP
TEMLVNSTSLCDDCFKNAEKQCEEQQTKTVSVPLAPMPPLPQSQNNSTSCSNNSQSASTV
INNKLTESTTSIDAVSILPDDDGYCEIDEIRLPAITKSPSIKINDPRRQSAAAPLPPEAI
DETTSNKKTDSLNDTQAPPPPPPPNKTSANGSGTKSKHNNQDTTINEQISNASSNSASTT
TNTNTIVLNKASGSDTEHIEVNYAYDSLTQPLAELNLNSEAQAKLNNGANAIISSSKILK
TTTCDSFCLPPETNIVGLQHSVPSIPCHLISAYVASLNLHISQLLPKLNERDIEREKLRK
ENQLLRDRLNSMHEREQSTQSEN
NT seq
6372 nt
NT seq
+upstream
nt +downstream
nt
atggatagcacgtcacagccgggactgccggagagatctcaaggcggcggaacttattta
aatggtgctagtcatagacgtccacaaacactaatgtcgccggtaggagttgaacgcaat
aaaaatgataaaatcgaattaaccataaccattcaaaaggatgcttctggctatggcatg
aaggtatcgggtgataaacctgtctttgtcgaaagcgtcaagacaggaggtgcggctcac
atggctggtttaatggaaggtgatatgattgtcaaggtgaacggtgaagaggccaaaact
ttgaatcatacaaaagtcgtgcatttaattaaagacaaatcacccgttatactgaccgtg
agccgtgtgcaaacgaagatgcagcgatcatcatcgatatcggttgggacgccaacgtct
ttaaatcagcgtgcccccatcacagcaccattgccagttgattcaagtacacgacgcgaa
gttgaatttacgcgaataaatacacttcggctgatgatggaccaagagaaaaagaatttg
gaaaatctaaaaacatcaaataatgcgaatcgtaacgatatcgcccaagccgaaacgaac
attttgcggttacaggaacaattacgtcaaatgcacggcgaggatccaacgttattgcat
ttcaatccaataacaccgtcaacactgctaaatgtaacagcgccaataataaatccatca
accgttcaatcgtccataacgccagcgttcctatcgagatttccgcgttcattgtcgtca
ctgagtttgggcggcaagaaaaaatccatcgataaagaaatggccaattcaagcctaacc
acaccaaatacaagtggcaatgccgatcatttgttacattcacccgtatcggctgcagcg
gccgctgctggattgcatcatcattcgtcgcacaatgcactattgtcagcggttaaaaat
aaattcacatccgaatcgacgccggttgaattacggcccggttttgttgataaaaatcga
tcaaaaaatcagcatcaaccgccgccattaccattaagaaattttccgcgtcgttcacaa
ccggctccaagtccagccaccgctgatggtatcgatgtcggtgataatttgattgattta
acgacatcaccatcgtcggccggtgttaagaaaaaaggaaaatcaacgtcggccgatatt
gataataagaccaataacaatgacaaagccagcaaaagttcatcgagcagcagcaatagt
tcattgtcggcagccacatcggccgcaaataaagtgaaaaaacgtagcaaagccaaaatc
aaagcaaattccgatccaaagattagcgctcaactctttatccaaatggaacaacgtgaa
tatgacaaacaagatttaattgcagcgactggacattcgattgcaaatgaaccgccacca
ttgccgccacgtcaaccgggcatgctcgaagaaaatcaaaattttatcaacaataataaa
tgcggttcaaatgctgcacagcagcagcggccaccatcaaatagtcttgaaacacgtatg
aattatccgttaattgcaacggcgacagccgttcgtgacaacatttcaccattcccacta
tcgaatcgcccaaatatacggcaacgtttgcaacaatcaaacacgcatcaacatgctctt
ggcttgacaccacatcaaattaatcagctaaacaatacgtcaccacatcgtcgcgttgta
tcatcgccagaacagcatttacattcccgtgattcggacacgtttgatgacgaaacgacg
ccaccaggtactcccccgccgccatataaaaacaaaacaaaatccacaagcgacgctaaa
caacatccaatggtgccgaaacgcaattatttccaatcaacaccgtgttcaaatgattca
gtacaaaataatccgaatgcacacaatttgagtgaacacgatgaatttatgttgaatgaa
agtatattcaatacatcaacatcatcggccacatcgttcggtgcaaatggtagcaacata
tcagcggcccaagcaaacattttacaacgtcaaatcatttctatggaagacgatgaattg
gtcgatgatcaagattcaataagcgatgatcatggaccattcaaatccttgcaacagttg
attgaaccagagaactcactatatttggcagtgtttttaaattttgttctatccaattcg
aatccatcgcagttattattctatttaataacaggtctatacaaagaaggcaccgtcaaa
gatatgcgaaaatgggcatatgaaattcattcgacatttttggtgccacgtgccccactt
atgtgggaaggtgttgatgaatcgttggcccgcgaagtggacaatgtactacaaaatgaa
catgataaaggtgaaattttgcggaaaatcttttacaaaggtcgagcacgtgccaaagaa
tgtatcgttcaacaattggccgaattccaaacgaaacgaacggccggtttgggtacaatg
tttggaccaagtgatcaacaattgcatgaagccaaaggtgataaggtgcgtgaacagcga
attgttgaagaaactctattgccaaagttgcaacagctcgttgacgacctggaaaaagat
gcatcgaatgaatgtccgaaaaagatggcattatcatcggcattgtcaaccgtattgcat
cgcacatttttgataacgcgttcaacaccgggcggaccaattgaacgtgttcatcatttt
gtgagccgtgaaaagagttttaagagccgtttgattggaaaaaatcgtaaaattatggtg
cgaggtcatcatttagtccttaaacagtattatgaagtggcccattgcaatcattgtcaa
aatatcatttggggtgtcagtccacaaggttatcattgtacgaattgtgaattgaacatt
catcgagcatgctcgcgtatattggaagaaagttgcccaggtccggtaccaacgaaaaat
gataaaatgagcaaatttattgaaaaaatacgaccaacacactactttaatcccgcggaa
cgatcgagacgtcaagaggatgaatgtggtgatgatctgctgcaagttgatcgtccttca
caagcgtcagtggtacgtcaaccatctgatcgtcgatcggatccaaataattcacttaat
tcaaccgcacaaagtaaccatcccaccacaaatgaattcaatacatcgcattccattgat
aacgaaacaagcatccatgaggttgacaacgaaaatcgagacagcacaaaatcaaaatca
gcgcccgtatcagtgaatcgctctgaatcgtataaagagcgactatcccacaagagaaac
catcgaaataatcgccgaaagatatccgatccgagtctatcatcgaaatccaatgaggat
caacatgtcgatttgggcataaataataccaatttcacggcaagttcgagttctagtctc
tcatccagcctcggtagtaatagcccatcattggaagcggttagcacaccgattggccat
caagtggcatcgtgtgcgccgcgtcaatgggttgatagtgaagacgagggtggcgaccaa
gaggccgactggagctcacacgttagcccggatattttacaaacactttccgatacggaa
aaacgacgacaggaaattattaacgaaatttatcaaaccgaacgaaatcatgtgcggaca
cttcgattgctcgagggaatatttatgcgtccgctacaagattcgtcagcgctgacagtg
gaacattttaatttgctgtttccgccatcgttgcttgtgctcaaagatttgcatcgaaat
tttaaacagcagctggaacaacgacgaggtgatcaagagccattggttgaagaaattggt
gatttgctattatcaatgtttgatggtaatgccggtgatcaattgcgtgagcatgcggct
tcattttgtgcacgacaaaaaatcgctcttgaagcgcttaaagagaagcgccgcaaggat
gcaaaacttcaacaattgttgaccgaagctgaatcgcataaagcttgtagacgtttacaa
ttgaaagatctattgccaactgtattgcaacgacttacaaaatatccattgttatttgaa
agtttggccaaaatatcgattaaagttgcaccggacaatgaaaaggaaacacaggccata
caacgtgcacgcgaattatcgagacgcattttggatcatgttaatcaagcggtgcgagaa
gctgaagacacacatacattgcaaacgattcaaaaacgcttggacaaatcactctacgaa
aaggaaccaaataacgaatttaaacatttggacctaacacaacataaactaatctacgaa
ggtactcttactcataagaagcagccacaagagcagctgcacggtcttctatttgaaacg
atggtcgttttattgcacaaaaaggacgataaatacatactcaaacacttggtgagccct
ggttcaacgggtggcgagagtaaaaatgagattcgtttcaatccaataacaaaaatcaac
ttgattctagttcgtcaatcggctgtggaaaagaattccttttatttaatcaatacgaat
gtaacgcaaatgttagagttaaccgctcccagcgctttagagtgcaaaacgtggtttaat
cacatatcagccgctgccgaggcgtataaacaacgaacaaagagtaatcatgacataaca
ccagtcgaagatccatccagtgttacgataccatctagtgcaacgacaaaagaaacagcc
gctgatcatgaatttgtcacgagtggcacaactagtggattaactgcatctaattcaatt
gcaactgccgataccgcacacaatcaatctctggacggacaaaaagacaccgctcgacat
aacacgagcaacgatggtgaagcattcgaccgtgaacatgattatattaatataaatgga
agtggtgccagagcaacagccaaatctgaagaggatgtgtgcgacaaagccaatcggaaa
tctgaattgttttccaataattcaaataatacgaggacattaacacagcaatcatcgtta
gtggcaccgagtgaggttcatattagcattagtccagcacttacggctgagcctgttcta
acaccaaatgaacgactgagacgcctggatgaatcgataagactcactttgtccgaaaag
caaaaaatcgtttgtgatatatttagagtaccgaatgagcatttttcagcgattgcagat
atagctggtcaaccagaggctcctaaggagccatcggatttattattggctgcatttgct
caagttcaatcgctaaccgaagcattgaatgagtatataaaaattccacaaattcaaccg
actgagatgctggtgaattcaacgtctctgtgtgatgattgtttcaaaaatgcggaaaaa
caatgtgaagagcagcaaacaaaaacagtatcggtaccgttagctccaatgccaccgttg
cctcaatcgcaaaacaatagcacaagctgcagtaataatagtcaatcggcatcaactgtg
attaataataaattaaccgaaagtacgacgtcaattgatgcggtaagcattttgcccgat
gacgatggctattgtgaaattgatgaaatccgattaccggcaatcacaaaatcaccatcg
atcaaaatcaatgacccgcggcgacaatcggcggctgctccactcccaccggaagcaatc
gatgaaacaaccagcaacaaaaaaacggactcgttgaatgatacacaagcaccaccacca
ccgcctccaccaaataaaacatcagcaaatggcagcggtacgaaatcaaagcataacaat
caagatacaacgataaatgaacaaatatcgaatgcatcaagtaattcagcatccactaca
accaacaccaatacaattgtattaaataaggccagcggttcagatacggagcatatcgaa
gtaaattatgcatacgattcgttgacacaaccattggccgaactgaatttgaacagtgaa
gcgcaggcaaaattaaataatggtgccaatgccatcatcagtagcagcaaaatattaaaa
acgacgacatgcgacagtttttgtttgccacccgaaaccaatattgttggcttacaacat
tctgtaccatcgataccctgccatctcatatcagcctatgtggcatcactaaatttacac
atttcacaattattgccgaaattgaatgaacgtgatatcgaacgtgaaaaattacgaaaa
gagaatcaattgttgcgtgatcgactgaattcaatgcatgaacgggagcaatccacgcaa
tcggaaaactaa
DBGET
integrated database retrieval system
