Contarinia nasturtii (swede midge): 116340204
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Entry
116340204 CDS
T08003
Name
(RefSeq) protein argonaute-3-like
KO
K02156
aubergine
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04320
Dorso-ventral axis formation
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09150 Organismal Systems
09158 Development and regeneration
04320 Dorso-ventral axis formation
116340204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cns03036
]
116340204
Chromosome and associated proteins [BR:
cns03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
116340204
piRNA pathway
116340204
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
PAZ
Piwi_N
ArgoL1
DDE_3
Motif
Other DBs
NCBI-GeneID:
116340204
NCBI-ProteinID:
XP_031622397
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MSDERKAFSRLSQATSDKKTDEGYTTPGKTDSDDTPRITGRGRLAAMTRPTEPQDAATSS
SSSRGRGRLVSLVQTSSIDQSIDPSFSKSSEEAKLQGTIGSSERPGIGGRGKLLSMVQPN
LEHDQPPKTAGRGSIGGRGKLMSMATPEQPGPAAIVDEAQSGISSTTDALAQLRLKRREE
ASSKSSGSKEATTFQQYVSLAAPLDEPAVEEVVEAKIGTKGAQLQGLTNYIRLQTEPNKG
VFEYEARFDPPVHSNQLRYALMNQQLDVIGRTKTFDGVKLCLPIQLPDQVTQLQSANPND
NSDVTITLIYKGRKKFSECQQLYGILFKNIMKILKFVQFGLKNFDPSAPKVIPQHKLEIW
PGYVTAVEECHDGVMLCVDVTHRVLRQTAVLDIFQHAYRNSRGEDFKTKVTQALLGAVVL
TRYNNKTYRIDDIDWDQNPTNTFQTKTGEVSYVQYYKQQYNIEIRDLKQPLLISREEKRV
AGKAEKESRVYSIIPEISFLTGLTDEQRADFKVMRDVATFTRISPNQRANELVQFCKRVN
NCPETKQLLANWGLSLMDNAVAVTLRQMEEERVIFANGKTFGVGPNADFGKYCTNNEQMS
VVNLHNWLLIHVKNDTKAAKSFMDCMEKNIRSMGITASKPKVIILDNDKTETYASTLRQA
LNVQTQIVVCLCPTARDDRYNTIKKICCAESPIPSQVINARTLGKEEKNRSIVQKIALQM
NCKLGGSLWSIKIPLANCMIIGIDTHHDKKSGSVSAFVASTNDTYTNWYSKAVVQSKNEE
LVHGLVVSLQHALQYYKKVNNNQLPRKIIIFRDGVGDGQLRAVKDYELAQLKQACSTMSE
DYNPPFTFVVVQKRINARFYVKKGAQAENPNPGAVLDHTITRRGLYDFYLVPQSVRQGTV
TPTHCVALEDESNFPPDVLQRLTYKLCFLYYNWPGTVRVPACCQYAHKLAFLVGNSLKRE
PAEQLNNRLFYL
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgaaagaaaagcattcagtcgtttgtcccaagccacaagcgacaaaaaaact
gatgaaggttataccactccaggaaaaaccgatagcgatgacacgccgcgcattactgga
cgcgggcgtttggccgccatgacaagaccgaccgaaccacaagatgcggctacttcttca
agttcgtcgagaggcagaggccgtctggtctctttggtacaaacaagttcaattgaccaa
tcaattgatccatcattctccaagtcaagcgaagaagcaaaactgcaaggcaccatcggc
tcgtcagaacgcccaggaataggtggacgtggaaaattattgtctatggtgcagcccaat
ttggaacatgatcaaccaccaaaaacggctggacgtggaagcattggtggacgcggcaag
ctgatgtccatggcaacgccagaacaaccagggccagcagccatagtcgatgaagcacaa
tctggaatatcttcaacaaccgatgcacttgcacaactacgtttgaaacgacgtgaagag
gcatcgtcgaagtcaagcggatcgaaagaagcaacaacgtttcaacagtatgtatctttg
gccgctcctctcgacgagcccgccgttgaagaagttgttgaagcaaaaattggtacaaag
ggtgcacagcttcagggacttaccaattacattcgacttcaaaccgaaccgaacaaaggc
gtgttcgaatatgaagcgcggtttgatccaccggttcattcaaatcagctacgctatgca
ttgatgaatcaacagttggatgtaattggtcgcacaaaaacattcgatggtgtcaaactc
tgtttgccaatacagctacccgatcaggtgacacagcttcaaagcgcaaacccaaatgat
aactctgatgtcacgatcacactaatctacaaaggtcgcaagaagttttctgaatgccaa
cagctgtacggtattctcttcaaaaatatcatgaaaattttgaagtttgtacaattcggt
ttgaagaattttgatccatctgcgccaaaggtcattccacaacacaaattggaaatttgg
cccggatatgttacagcggtggaagaatgtcacgatggtgtgatgctatgtgttgatgta
acacatcgtgttctacgtcaaacggccgtacttgatatctttcagcacgcgtaccgaaat
tctcgaggcgaggatttcaagaccaaagtgacacaagcactacttggggcagtcgttttg
accagatacaacaacaaaacctatcgcatcgacgacattgattgggaccagaatccgaca
aacacatttcaaacaaaaaccggtgaagtttcatacgttcaatattataagcaacaatat
aatattgaaatcagagatttgaaacaaccattgctcatcagtcgtgaggagaaacgtgtt
gctggtaaagcggaaaaggaatcacgcgtttattcgatcattccagaaattagtttcttg
acaggtttaaccgatgaacagcgtgccgacttcaaggtcatgcgagatgtggctacattc
acacgcatttctccaaaccagcgagcaaatgaattggtgcagttctgcaaacgagtgaac
aactgtccagagacaaaacaattattggccaattggggtctgtctctgatggataacgcc
gtcgcagtaacattacgtcaaatggaagaggagcgagtcatctttgcgaatggcaaaaca
tttggtgttggtccgaatgccgatttcggtaaatactgcacaaacaatgaacagatgtca
gtggttaacttgcacaattggctactgattcatgtgaaaaacgatacaaaggctgccaaa
tcattcatggattgtatggaaaagaatatacgttcgatgggaattacagccagcaaaccg
aaggtcatcattttggacaatgataagaccgaaacgtatgcatcaactctacgtcaggca
ctcaatgtacaaacacaaatcgtggtgtgcctttgcccaaccgctcgcgatgatcgttac
aatacgatcaagaaaatctgctgcgcagaatctccgattccatcgcaggtgatcaatgct
cgcacattaggtaaagaggagaaaaatcggtcgatcgtgcaaaagatcgcacttcagatg
aactgtaagcttggcggaagtttgtggagcattaaaattccgttggcaaactgtatgatc
attggcatcgacacgcaccacgataaaaaatccggctcggtaagcgcatttgttgccagc
accaacgacacatacaccaattggtacagcaaagctgttgtccaatcgaagaacgaggaa
ttagttcacggattagtcgtttcattgcaacatgcattgcaatattacaagaaggtcaac
aacaaccaattacctcgcaaaatcatcattttccgcgatggtgttggtgacggccaacta
cgagcagttaaagattatgaattggcgcagcttaaacaagcgtgttcaaccatgtcggaa
gattacaatccaccattcacatttgtggtggtacaaaagcgcatcaacgctcgattctat
gtgaagaaaggagcacaagccgaaaatccaaacccaggtgctgtcttggatcacacaatc
acacgtcgcggtctttatgacttctatttggtgccacaaagtgtgcgccaaggtacagtc
acgccaactcattgtgtcgcacttgaggatgaaagtaatttcccgcccgatgttttacaa
cggctcacgtacaaattgtgcttcctttactacaattggccaggtactgttcgtgtgcca
gcttgttgtcaatatgcacacaaattggcattcttggttggaaattcgttgaagcgtgaa
ccagccgagcagctcaacaatcgattgttttacctctaa
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