Contarinia nasturtii (swede midge): 116340530
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Entry
116340530 CDS
T08003
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116340530
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cns01009
]
116340530
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cns04131
]
116340530
03029 Mitochondrial biogenesis [BR:
cns03029
]
116340530
Protein phosphatases and associated proteins [BR:
cns01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116340530
Membrane trafficking [BR:
cns04131
]
Autophagy
Autophagosome formation proteins
ULK complex
116340530
Mitochondrial biogenesis [BR:
cns03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
116340530
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG17_like
ATG11
TBK1_ULD
Med3
SelP_C
Motif
Other DBs
NCBI-GeneID:
116340530
NCBI-ProteinID:
XP_031622940
LinkDB
All DBs
Position
Unknown
AA seq
1313 aa
AA seq
DB search
MVLYIFHVNSGTMLTFDMEMALQTVQNLKETIDRLYSIPSTKQVLMISGGEVLNPMSRVC
SYPSGTDENPIYMFCTYFDSSKLTQPWPSECRIKYEDEVSKCLKMPAEYNTVVIRAKLAQ
KMYDSATKEIKECERHVFDQHLQQQGWAAVMANLEDLTNEFKQRSQMILNTINDYLEKRP
KYLDLLNSFPADLVELSTVPILSELLPCAQHDFHGFDEIFHDTVSYTGSTSADSGTSVGG
SSSNSRNRESLSGCDSGGVGDSSSQTQGQIDTVISTDKTSAAAAAAATTTTTIQDKTSVD
SHNNEAPKSRTLTLLQWISSKENHKALDEMAKHCGKVLTKFDENSIQKVKEGIKRTIDIA
EQVIIDSLESVREVGGLTKRLELLDTTMCEARKLVQDQKELSTAFQQNQTRANHLGDASI
LPDLCLSHSNQLSVMLLNHNKLLDFEKRIFKAKEELAENLNKRLDYVAKIENSISDLDCN
LLLHHENFKRLKNHMMIIEQIHEAPTTYVTAVTEIVRRKLFSDAMLKWAAELSSNMFVIH
DEERSRREEFENTFDQHFLNALFLGLEDEPPTFATQAPAIFDNRLPNLTKADLQYLKEAI
PDIASKIELPDLKFALDFFSTRYGSSKDSLMDKKSTDDVKLIANKLLDIRTFKDGCESET
DTEEFEKVGQSPIDRRKLADGRSETVSKPESVEMATSTNQVETVSIETLTEDNAGTAQIE
IERLKTLLVAMAQISRNSIELLRKQLVELRDGVNCDKNDVAVEFKKIETMWSNLKEGTET
NEREIINRLTVDHELELTDVRKLLTMKTDEVVDLKAENSKLLEKLANSELETETSKTRSS
NEIDALKARIAQLEDRVKGHETEKTKAVNEIKDRLIREHKTEIESLRCRYKLMKNVDRTP
SDTSLERVERPELQACSPTSSQSLYRRILDEKERQLDAANSQVDVLSKQNDELKRTIQNL
TEGETLESVDQMKIQIDTLQKEKYKLRQKLHYERSKNIDLVPAGASTSDPASSTLTKSLY
RARLCTKHCISVSLCEVGVNVLIIFNEQLSRFVIVQDSPIIHFLEEDSHTFFNLPVPTRN
EEKFENVQKAPYYIGVVTEKQFCLVKREGTRYRVPIGTRFYRIKVRPLPPNSRTSSISEN
EQGTQSARKSSVSESIAPSSSQDTVAAAAAALSTSKITTDFCRPNPPVVRSLSAQFTDSF
AQTESTDVAITETTEIPKIVEKDMVDSGVVDKGERISPSGSVSTSFVGRLRYASVGEDEA
IIVDNVDNVPSSQEETATNLIEITDEFGTDGDQDESDEYRSLDARSDDVEPIS
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atggtgttatacatatttcacgtgaacagcggcacaatgctgacgttcgacatggaaatg
gcactacaaacggttcaaaatcttaaagagacaatcgaccgattgtattcaataccatct
acaaaacaagtcctaatgattagcggcggtgaggtattaaatccaatgtcgcgtgtatgc
agctatccatctggtaccgatgaaaatcctatttatatgttttgcacatatttcgatagt
tcaaaattaacgcagccatggccaagcgagtgtcgcattaaatacgaagacgaggtgagc
aaatgtttaaagatgccagctgaatataataccgttgtgattcgagcgaaattagctcaa
aaaatgtacgatagtgccaccaaagagataaaagaatgcgaaagacatgtgtttgatcag
catttacaacaacaaggttgggccgctgttatggcaaatctagaagatctaacaaatgaa
ttcaaacaacgtagtcaaatgatattaaatacaatcaacgactatctggaaaagcggcca
aaatatttggatttattaaattcatttccggcggatctagttgaattgtcaacggtgccc
attttaagtgaattgttgccgtgtgcacaacacgattttcatggattcgatgagattttc
catgataccgtctcgtatacgggatcaacgagtgccgatagtggaacaagtgtcggtggc
agcagtagcaatagtcgaaatcgtgaatcacttagcggatgtgacagtggaggtgttggc
gattcatctagtcaaacacaaggacaaatagatacagttatttcaactgataaaacatca
gcagcagcagcagcagcagcaacaacaacaacaacaatacaagacaaaacatccgtagat
tcacacaataacgaagcgccgaaaagccgaacacttacacttttacaatggatttcatcg
aaagaaaatcacaaagcattagacgaaatggccaaacattgtggaaaggttctaacgaaa
ttcgatgaaaattccattcaaaaagttaaagaaggcatcaaacgaaccatagatattgcc
gaacaggtaattattgatagtttggaaagtgtacgtgaagttggtggcttaacaaaacga
ctggaattactcgatacgacgatgtgtgaagctcgtaaattggttcaggatcaaaaggaa
ctgtcaacggcatttcaacagaatcaaacacgtgccaatcatttgggcgacgcatcaatt
ctacccgatctctgcttatctcattccaatcaattgagcgttatgcttctgaatcacaat
aaacttttagattttgaaaagcgaatttttaaagcgaaagaagaattggccgaaaatttg
aacaaacgcttggattatgtggccaaaattgagaattcaatcagtgatttggattgcaat
ttactgttacaccatgaaaatttcaaacgattgaaaaatcatatgatgattattgaacaa
attcatgaagcaccaaccacctatgtaacggctgtgactgaaattgtacgccgcaaacta
ttttcagatgctatgcttaaatgggctgctgagctttcatcaaatatgtttgtcattcat
gatgaagaacgttcacgtcgagaagaatttgaaaatacattcgatcaacattttttaaat
gcattatttttgggtctcgaagatgaaccaccaacgtttgcaacacaagcaccagccata
tttgacaatcggttacctaatttgaccaaagcagatttacaatatctgaaggaagccatt
ccagatatagcttcaaaaatagaattgcctgatttgaagtttgcgttagactttttttcc
acacgctatggtagcagcaaagactcgttaatggacaaaaaaagtaccgacgatgtcaaa
ttgatagcaaataaattgttagatattcgcaccttcaaagatggttgtgaatcggaaacg
gataccgaagaatttgaaaaagttggccaaagtccgatcgatcgacgaaaattggctgat
ggcagaagtgaaactgtctcaaaacccgaatcagttgaaatggccacatccactaaccaa
gttgaaacagtatccatagaaacattgacagaggataatgctggaacagcgcagattgaa
atagaacgtttaaaaacacttctcgttgcgatggcacaaatatcacgtaactcaatcgaa
ttactacgaaagcaactggttgagctccgtgatggagtaaactgtgataagaacgatgta
gctgttgagtttaaaaagatcgaaacgatgtggtcaaatctgaaagaaggaactgaaacg
aatgaacgtgagatcatcaatcgtttgacggtagatcatgaattggaattaactgacgta
cgaaaactattgacaatgaaaacggacgaagtggtcgatttgaaggcagagaattcaaaa
cttttggaaaaattggcaaacagtgaattggaaacggaaacatcaaaaacacgtagttcg
aatgaaattgatgcactcaaggcgcgcattgcacaactcgaagatcgggttaagggtcac
gaaactgaaaaaacaaaggctgtgaatgaaataaaagatagactgattcgtgagcataaa
accgaaattgagtcgttgcgatgccgttataagctgatgaaaaatgtcgatcgaacacca
tccgatacaagtctcgaacgtgtcgaacgtcctgagcttcaagcctgctcaccgacatct
agtcagagcttgtatcgtcgaatcttagatgaaaaagaacgacaattggacgcagccaat
tcacaggtcgatgtgttgagcaaacaaaatgatgaacttaaacgcaccatacaaaattta
accgaaggtgaaacactcgagagcgtcgatcaaatgaaaattcaaatcgatacattgcaa
aaggaaaaatacaaattacgtcagaaattgcactatgaacgatcgaagaatatcgatttg
gttccagctggagcatcaacaagcgatccagcatcatcaactctaacgaaatcattatat
cgtgctcgtttatgcacaaagcattgcatctcagttagcttatgtgaagtcggtgtaaat
gtgcttatcatatttaacgaacaactgtctcgatttgtcattgtacaagattcaccaatc
attcatttcttagaggaagatagtcatacattcttcaatcttcctgtgccaacacgaaac
gaggaaaagtttgaaaatgttcaaaaagcaccatactatattggtgtggtcactgaaaaa
caattctgtttggttaaacgcgaaggaacgcgctatcgtgtaccaatcggcactcgattc
tatcgaataaaggtgcgaccattgccaccaaatagtcgtaccagttccatatcggagaat
gaacaaggcacacaaagtgctcgtaaaagttccgtatccgaatcgatcgcaccaagttca
tcacaagacacagtagctgcagctgccgccgcattgagcacatcgaaaattaccactgat
ttctgtcgcccaaatccaccggtagttcgttcgttgagtgctcagttcaccgattcgttt
gcacaaactgaatcgaccgatgttgctatcaccgaaacaacggaaattccaaaaattgta
gaaaaggatatggtggactcaggtgtggtggacaaaggtgaacggatcagcccaagtggt
tctgtgtcaacatcatttgttggacgtttacgttatgcaagcgttggagaagatgaagca
atcatcgttgacaacgttgacaatgtaccatcatcacaagaggaaacggccacaaacttg
attgaaataactgatgaatttggcacggatggtgatcaagatgaatccgatgagtatcgt
tcgcttgacgcaagaagcgatgatgtcgaaccgattagttag
DBGET
integrated database retrieval system
