Contarinia nasturtii (swede midge): 116340732
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Entry
116340732 CDS
T08003
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03010
Ribosome
cns04120
Ubiquitin mediated proteolysis
cns04137
Mitophagy - animal
cns04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
116340732
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116340732
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116340732
04137 Mitophagy - animal
116340732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cns03011
]
116340732
04121 Ubiquitin system [BR:
cns04121
]
116340732
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cns04147
]
116340732
Ribosome [BR:
cns03011
]
Ribosomal proteins
Eukaryotes
Small subunit
116340732
Archaea
116340732
Ubiquitin system [BR:
cns04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
116340732
Exosome [BR:
cns04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116340732
Exosomal proteins of colorectal cancer cells
116340732
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
IBR
Dsc3_N
Ubiquitin_5
TBK1_ULD
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
116340732
NCBI-ProteinID:
XP_031623229
LinkDB
All DBs
Position
Unknown
AA seq
156 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKNYSTPKKIKHKRKKVKLAVLKYYKVDENGKIHRLRRE
CPGENCGAGVFMAAHEDRHYCGKCSLTFVFSKNEEK
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgttaagaccctcacgggcaagactatcactcttgaagtcgaaccttcc
gatactatcgaaaatgttaaggccaaaatccaagacaaggagggaattccaccagaccaa
caacgtttgatctttgctggcaaacaattggaagatggtcgcacattgtccgactacaac
atccaaaaggaatcaacccttcacttggtgctccgtctccgtggtggtgccaagaaacgt
aagaagaagaattactcaacaccaaaaaagatcaagcacaagagaaagaaggtcaagctc
gccgtcttgaaatactacaaggtcgatgaaaacggcaaaatccaccgcttgcgtcgtgaa
tgcccaggcgaaaactgtggcgctggagttttcatggctgcacatgaagaccgtcactac
tgcggcaaatgctcgctcacatttgttttctcaaagaacgaagagaaataa
DBGET
integrated database retrieval system
