Contarinia nasturtii (swede midge): 116340819
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Entry
116340819 CDS
T08003
Name
(RefSeq) ATP-dependent helicase brm isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116340819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cns03021
]
116340819
03036 Chromosome and associated proteins [BR:
cns03036
]
116340819
Transcription machinery [BR:
cns03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116340819
Chromosome and associated proteins [BR:
cns03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
116340819
Chromatin remodeling factors
BAF complex
116340819
PBAF complex
116340819
GBAF(ncBAF) complex
116340819
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
HSA
SnAC
ResIII
BRK
HDA2-3
QLQ
DEAD
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
116340819
NCBI-ProteinID:
XP_031623376
LinkDB
All DBs
Position
Unknown
AA seq
1501 aa
AA seq
DB search
MGPPAQSPAPSQSPHSPYPPNPTPPAQQAPSQQQQVQQQPHQPPRPHVPAQQGHIMQQMP
MNAPPHHLQQNGPSPLGSAPNHMQHHPPMGPHVPPHAGMQMQPMPPMGYQGHQMPPNGPP
LGPSQPGQENLNALQRAIDSMEEKGLQEDPRYSQLLALRATSKQQHLNQNQMSLLRCQIM
AYRLLARNQPLSKQIQAGLSGSPCYDMNASAGNTRRSPPHCSTPPASPYQQPPSGPMQNQ
QPSSLPPHQQPPAATGGERNANEPRTDARNDRSEKPQPAPISVKQRFTTVAKPIGIDPIT
ILQERENRMASRIALRMEELTNLPANMPEDLRLKAQIELRALRVLNFQRQLRSEIVQCGR
RDTTLETAINIKSYKRTKRQGLREARATEKLEKQQKLEAERKRRQKHQEFLAAVLQHYKD
FKEYHRNNQARLVRVNKAVMNYHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQK
KDKRLAFLLSQTDEYICNLTQMVKQHKDDQQKKKEEDIRRKRKYKKDMLQSGNFSEIDEI
SADDLRVTVVNPTTGQRYSGDDGPLLRDLQRWLDAHPGFEWVDTDTEDSDNEEEIKKEDT
TADEENDKEKAEELLKKPKVEDDEYKTEEQTYYSIAHTVHEKVTKQAKIMVNGTLKEYQV
KGLEWLVSLYNNNLNGILADEMGLGKTIQTISLVTYLMEEKKVNGPFLVIVPLSTLSNWV
LEFEKWAPSVVVVSYKGSPAGRRHIQNQMRATKFNVLLTTYEYVIKDKSVLAKLSWKYMI
IDEGHRMKNHHCKLTQVLNTHYNAPFRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTF
EQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCE
MSSLQKVLYRHMQSKGVLLTDGSEKGSKGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKY
CDHIGGHGTVTGDDLYRVSGKFELLDRVLPKLKATNHRVLLFCQMTQCMTIIEDYLGMRQ
FTYLRLDGTTKSEDRGDLLKKFNSKESEYFLFLLSTRAGGLGLNLQAADTVIIFDSDWNP
HQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTG
SERQQFLQSILHQDEGDEEEENEVPDDEMINLMISRSDEELELFKKMDIERKEHDGDKTR
LISEDELPDWLVKEDDEVDRWNYEEDSILGRGSRQRKEVDYTDSLTEKEWLKAIDGENDF
EDSNVLSIFIGEDDRDKRKKNKKRKSRRGESDDSDGDLPLKRRKVQVDPKIKKQMTKVMK
EVIRFADDTGRVLSDPFMKLPSRQKLPDYYEIIKKPVDIKKILQRIEDGKYYDFTELEKD
FVQLCQNAQIYNEETSLIYEDSIQLQSVFFNAKQNLFASLAAAAEESRSGDNGGAGDSDE
NDDDESDDGSNPSQSKSKPGTSSSSSNNTNSSNAARKQAPTRRKRTQKKYAISDDDDDDL
E
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atggggccaccggcacaaagtccagctccatcgcaatcaccacacagtccatatccacca
aatcccactccgccagcacaacaagcaccatcacaacaacagcaggtacagcagcaacca
catcaaccaccacgaccgcacgttccagcccaacaaggtcatataatgcaacagatgcca
atgaatgcaccgccgcatcatttacaacaaaatgggccatcgcccttgggttcggcaccg
aatcatatgcaacatcatccgccaatgggtcctcatgtaccaccacacgcaggaatgcaa
atgcaaccaatgcccccgatgggctatcaagggcatcaaatgccaccaaatggaccccca
ctaggaccatcacaaccgggtcaagaaaatctgaatgcattgcaacgagccattgattcg
atggaggaaaaaggtcttcaagaggacccaagatattctcaattgctagcacttcgtgca
acatcaaaacaacaacacctgaaccaaaatcagatgtcattgctacgttgtcaaataatg
gcgtatcgtttattggcccgaaatcaaccgttgtccaaacagattcaagccggattaagt
ggatcaccatgctatgatatgaatgctagtgcgggcaatacaagacggtcaccaccacat
tgctcaactccgccagcaagcccgtatcaacaaccgccatctggtccaatgcaaaatcag
caaccatcgtcgctgccaccacaccaacaaccaccagctgcaacagggggagaacgaaat
gcaaacgaaccccgtactgatgcaagaaatgatcgatctgagaaaccacaaccagctcca
atcagtgtgaagcaacgttttacaactgttgccaagcccattggaatcgatccaataacc
attttacaggagcgtgaaaatcgtatggcatcacgaattgcattgcgtatggaggaacta
actaatttaccagcaaatatgccggaagatttacgacttaaagcacagattgagttacgt
gcattgcgagtattaaatttccaacgtcaattgcgtagcgaaattgttcagtgtggccga
cgagatacgacacttgaaacagccattaatatcaaatcatacaagagaacgaaacgtcag
ggattgcgtgaggcgagagccactgaaaaattggaaaaacaacaaaaactcgaagccgaa
cgtaagcgtcgtcaaaagcatcaagaatttttggcggccgtcttacaacattacaaagat
ttcaaggagtatcatcgcaataatcaagcacgtttggtgcgtgttaataaagccgttatg
aattatcatgcgaatgcggaacgtgaacaaaagaaagaacaagaacgtattgaaaaggag
cgtatgcgccgtttgatggccgaagatgaagagggttatcgtaagcttatcgatcaaaag
aaagacaaacggttggcattcttgttgtcacagaccgatgaatacatttgcaatttaacg
cagatggttaaacagcacaaagatgatcaacaaaagaaaaaagaggaagatattcgccga
aagagaaaatataagaaagatatgctacagagcggcaacttctccgaaatcgatgaaatt
tcggctgatgatttgcgtgtgaccgttgtaaatccaacaactggtcaacgctactctggt
gacgatggaccattgttgcgtgacttgcaacgctggttagatgctcatccaggttttgaa
tgggttgatacggacaccgaagattcagataatgaagaagaaatcaaaaaagaagatacc
actgccgacgaagaaaatgacaaagaaaaggcagaagaacttctcaaaaaaccaaaagtc
gaagacgatgaatataaaactgaagagcaaacatactacagcattgctcacactgttcat
gagaaagttacaaaacaagccaaaattatggttaatggtactctaaaagagtatcaagtg
aaaggtttggaatggcttgtatcactttacaacaataatttgaatggcattttagctgat
gaaatgggtttgggtaaaactattcaaaccatttcattggtcacatatttaatggaagag
aaaaaagtaaatggcccattcttggtcatcgtaccgttgtcaacactatccaattgggta
ttggaattcgaaaagtgggcaccatccgttgtggtcgtttcgtacaaaggttcaccggct
ggtcgtcgtcacattcaaaatcaaatgcgcgccaccaaatttaacgttttgctaacaacg
tatgaatacgttatcaaggataaatcggtattggcgaaattatcatggaaatacatgatc
attgacgaaggtcatcgtatgaaaaatcatcattgtaaattgacacaagtactcaatacg
cattacaatgcaccgttccgtctattgctaactggaacaccattgcaaaataagctgccc
gaattgtgggcattgttgaacttcttgttgccatcgattttcaagagttgctccaccttc
gagcaatggttcaatgcaccgttcgcaacaactggtgaaaaggtcgaattaaatgaggaa
gaaaccattttgattattcgtcgtttgcataaagttttgcggccattcttgttgcgtcgt
ctcaagaaagaagtcgaatctcagttgcccgacaaagttgaatacatcatcaaatgtgag
atgtcatcgttgcaaaaggttctttatcgtcatatgcaaagtaaaggtgttttacttacc
gatggatctgagaagggtagcaaaggaaagggcggtgcgaaagcactcatgaacacaatc
gttcaattgcgtaaattgtgtaatcatccgttcatgtttcaacacatcgaagagaagtat
tgcgatcatattggcggccatggtacggttactggagacgatttgtatcgtgtatccggt
aaatttgaattacttgatcgagttttaccaaaactcaaagcaaccaaccatcgcgttttg
ctcttctgtcaaatgacacagtgcatgaccattattgaagattatttgggcatgagacaa
tttacataccttcgtttggatggtacaacaaaatccgaagatcgtggtgatttgttgaaa
aaattcaattccaaagaatccgagtatttcttgttcttgctgtcgacacgtgccggtggt
ttgggtttgaatttacaagcggctgacaccgtcattatattcgattcggattggaatccg
catcaagatttacaggcacaggatcgtgcccatcgtatcggccaacggaatgaagtgcgt
gtattgcgtttgatgaccgttaattcggtagaagagcgtattttggctgcggcccgttac
aaattaaatatggacgaaaaggttattcaggccggtatgttcgatcaaaaatcaacggga
agcgaacgtcagcaattcctgcaaagtattttgcatcaagatgaaggcgatgaagaggaa
gaaaatgaagtgcccgatgatgaaatgatcaatttgatgatttcacgttctgatgaagaa
ttggaattgttcaagaaaatggatatcgaacgtaaagagcatgatggtgacaaaacacgt
ttgatcagcgaagacgaattgcccgattggttggtgaaagaggatgatgaagtcgatcga
tggaattatgaagaagatagcattctgggccgtggatcacgtcaacgtaaagaagttgat
tacactgacagtttaactgaaaaggaatggttgaaggcaattgatggtgaaaatgacttt
gaagattcgaatgttttgtcaatttttataggtgaagatgatcgcgataaacgaaagaag
aacaaaaagcgaaagagtcgtcgcggcgaatcggacgattcggatggtgatttaccattg
aaacgtagaaaggtgcaggtagatccaaagatcaaaaagcaaatgactaaagtgatgaaa
gaagtcattcgatttgccgacgatactggacgcgtattgagtgatccatttatgaaattg
ccatcgcgccaaaaattacctgattactacgaaattattaagaaaccagtagatattaag
aagatattgcaacgcattgaagacggtaaatactatgatttcaccgaactggagaaggac
tttgtgcaactctgtcaaaatgcacagatttataatgaggaaacatcactcatctacgaa
gacagtattcaattgcagtcggtgtttttcaatgcaaaacaaaatttattcgcttcattg
gcggcggctgctgaagaaagcagatccggtgataatggtggcgcgggcgattctgatgaa
aatgatgatgatgaatctgatgacggatcaaatccatcacaatccaaatcgaaaccaggc
acatcatctagttcatcaaacaatacgaatagcagtaatgcggctagaaaacaggcacca
acacgtagaaaacgcacacaaaagaagtacgctatttccgacgacgatgacgatgattta
gaataa
DBGET
integrated database retrieval system
