Contarinia nasturtii (swede midge): 116340855
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Entry
116340855 CDS
T08003
Name
(RefSeq) transcriptional regulator ATRX homolog isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cns03000
]
116340855
03036 Chromosome and associated proteins [BR:
cns03036
]
116340855
Transcription factors [BR:
cns03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
116340855
Chromosome and associated proteins [BR:
cns03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
116340855
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
116340855
NCBI-ProteinID:
XP_031623430
LinkDB
All DBs
Position
Unknown
AA seq
2365 aa
AA seq
DB search
MNRKKVNGTKPNVESSSVCKGAYDECGESNSTDSFDMNDFKSAALTKKYSVQIHKNNADL
MAELDNINIMGDESDVEMIEPNTSKLNGANNSVSHSSSNVISLNTTHASDDPVNGDFEHT
KHDRILAWAQSQSQNLSTCIESVLSDHDYLSQERLLGIIAGIEENTELESQRETNSNKSK
EQSENEKSKDHGELNGGDLVHTKTSKILTSKNIDDLSEILKQLANCKEHAQRLSLVEKIE
KSAKDMKAQLNQNNGNTTGNNSVANANDITSLEFSSNHSKPMEYAGGVNCSAQSSIDGPK
DGEVKCCDLVAELQTELKSIDDMANRIATDTASIRSKLGDIEKQPQAEKSISKLRVNLSL
LVEDVSKELKKVAIKLNPTMASVESKRENKSENRSLSHSTDEDSDISKSRRKIPKLKRRR
KKPKGNTSDSTALSSSSEDSFPVAKNDTMDEPFVVTQNIDDLINQNGSNSANGSIRKEND
FLGFDNVDFENGIKNEEQLSESISSQQQLSDKDQNKMDTSNELSEQDTQIINQKATESEQ
SNNSALTKKSTDVEDISSDAFILSDDFIEEDHGDDDDDDIRKLLDFTSIENKRIASTNAA
AKVNGIVVPKKLEPKTKASKENAVENFLANSTDTDKPIESDDEKSEHEEYTDEHYLKEQN
QMFKDQLLQDSSDSEMNSDSDQRVNGKGIYSETEDSDRSSDSNQSIMEKFLASESKGSGQ
KSTKDKEGKSKAGKVSSDNEKKSEPKTKDAEIEKNIDHFIEELDSDIEFDASESESVSEA
PRKTQSTIGKHIFANIEKDKQILIPSDEENESSKKKDSQTQKSEADSSEKDSSEILDTTM
FKSSKSNLTATQLSKVLQTNRNKQTKSRVSPECISVSSDDDLEIESTSKKDGNEDEDEEK
EKRVTRKLLRHDQLADDTKQAQREEADRLKRLDKKNERLTQFLESQRQSQSETEKYVDPN
QVCLDVDSKENVEIVVHPEITKHLKPHQVEGIKFMYDCCYGSVDNMDKYSGSGCILAHCM
GLGKTLQLITLLHTVICYTQLKTDKVLVICPKSTVMNWKEEIERWLGAIKKTRRLKVFYF
PEQSDISSKLQTLSEWSQCGKDGNKQAGCLLLGYEAFRVLVFYHASKKSLQMYSTNELEK
IRQKIHKYLLDPGADLVVCDEGHMIKNQKSTTSAAVNKISTRRRIVLTGTPIQNNLKEYY
SMVNFIKPSFLGTEKEFANLYVNPIKSGQHKDSSKSEIKHMKQRSFVLHKKLSKFVQRKE
AALLKSFLPEKYEFVLFIPMTKIQTNLYEFFLENRPNQDQKGKSLIPDYTVLRKIWTHPK
VLENAYLNAIQNKTKVKSAIPTTSTTTTANNDSDDDQPDDVFDSQTGQMSVTSDWWRQHL
TKEDLETILPSNKLKILFEILARCRRNKEKCLIFSAFVAVLDVVEFFMKLINDQEKDGNK
PGLETFRGPWEIGKDYYRLDGKTAKNHRHNMITNFNDPKNERTRAFLISAKAGGQGINLI
GANRVVLLDTSWNPSNDQQNIFRVFRLGQKKICYIYRLISMGTMEEKVYSRSVTKQAMSC
RVVDEQQCDRHYNMAELTELYTLTKPNMKDRQTPNVPKDDLLASLLMQFPQMVYKYHEHD
SLLENKGEEELSEQEKNDAWAAYEADVKRKNETNMGPYSNNFGMLPNYPGLGTYANSLFN
NYNNLSGLNYPYNMYGSYNPYANDLMRFDNYSQFYNNLMNVAGTSMTNYNQGNPSLLSPS
HQSSSASSPSPIMNSFSSSSRNWMQSNASSTNYANNLLSSLAQTSSSSKSSYSSYLNSLY
NALGTNNPTASSSSAANASSSKTPPLPITGTDYNQMAYLQKQQLSHLSATSPSSSTTSMT
VNSSAQQGPNALRNPLLTKELSIPRNLTMSNTKEMFSTTNIPTSVITKSGERSTPSASST
SPNLQNDASKSSTDTNISSSIDKTDTRPTKTTSERHLTIKNAATINAEARGSPDTTAKNQ
AQNKSISNGVSSTVSSAIDSVRKTNNKSATSGMTISTNMGIVYPSQKPINQSTASTSKNT
TNSILLSNTKPKDKSPQNPISATSSVSSKSQPLAAIIRKQPIQSTSSKSVDPTNDAVAAI
NKNKALTVTARNITPTAAAAAKPPVTGVNNSITLSPIPNNVSKYSGSSMTITPQVNQVKV
HTPQQSRTLSKSNSSSPVPLAITKVTSNHPITKSPIPMVVTKPNILSSRNSNTSKTLVSV
PKLSNATTINTSGVRILNSNQSLSPKAGPRPPGFKPIIAQTKSQAVAAASASIANKSGMQ
IKEVTSLAGQKPVNRPSPLDTRKRLANDPIALSPAKKPKPMAKSSTPPGVRKPRSSLAGI
RINMQSQTQQDNSQVPVPVEIVELE
NT seq
7098 nt
NT seq
+upstream
nt +downstream
nt
atgaataggaaaaaagtaaacggcacaaaaccgaatgttgaatcgtcatcggtatgcaaa
ggagcctacgatgaatgtggtgaaagtaacagtaccgactcttttgatatgaatgatttt
aaatcagcggcactaacaaaaaaatacagtgttcaaattcacaaaaataatgccgatcta
atggccgaactcgacaacatcaacatcatgggcgatgaatccgatgttgaaatgattgaa
ccgaatacaagcaaactaaatggcgcgaacaacagtgtttcacacagttcatcgaatgtc
atcagtttgaacacaacgcatgcaagtgacgatccagttaacggtgattttgagcatacc
aaacacgaccgcatattagcctgggcacaaagtcagtcgcaaaatttgtcaacgtgcatt
gaatcggttctttcagatcacgattatctgtcgcaagagcgattacttggcattattgcg
ggcattgaagaaaataccgaattggaaagtcaacgtgaaacgaattccaataagtccaaa
gaacaaagcgaaaatgaaaaatcaaaagatcatggtgaattgaatggtggtgatttggtg
cacacaaaaactagcaaaatattaacctcaaaaaatatcgacgatttgagtgagatattg
aaacaattggcgaattgcaaagagcacgcacaacgtttatcgttggtcgagaaaatcgaa
aaaagtgcaaaagacatgaaggcccaactcaaccagaacaatggcaatacaactggaaat
aattctgttgcaaatgccaacgacattacaagtctcgagttctcatcaaatcattccaaa
ccaatggaatatgcgggcggcgtaaattgttctgcacagagtagcatcgatggacctaaa
gatggcgaagttaaatgttgtgatttggtggcagaattgcaaactgaattgaagtcaatt
gacgatatggccaatcgaattgccactgataccgcatcgattcgaagtaaattgggggat
attgaaaagcaaccgcaggctgagaagtctatttcaaaattgcgtgtaaatttatcgctt
ttagttgaggatgtgtcaaaagagctaaaaaaagtcgcaataaaactcaatcctacaatg
gcttctgttgaaagtaaacgtgaaaataaatcggaaaaccgttcgttgagtcattcaaca
gatgaagacagtgatatctccaagtcacgacgaaaaattccgaaattgaaacgtcgacgt
aaaaaaccaaaaggtaacacatccgattcgaccgccttgagttcaagctcggaagattca
tttcctgttgccaaaaacgatacaatggacgaaccatttgtcgtcacacaaaacatagac
gatctcataaatcaaaacggtagcaacagtgccaacggatctattcggaaggaaaatgat
tttcttggttttgacaatgtcgactttgaaaacggcatcaagaacgaagagcagttgagt
gaatcgatatcgtcgcaacagcaattgagtgacaaagatcaaaataaaatggacacatcg
aatgaactgagtgaacaggacacacaaattatcaaccaaaaagcaacggaaagtgaacag
tcaaataatagtgcactaacgaaaaagagcacggatgtagaagacatttcgtcggatgcg
tttatcctgagtgatgatttcatcgaagaagaccatggcgacgatgatgatgacgacatt
cgaaagcttttggatttcacatcaattgaaaacaagcgaattgcatcaacaaatgctgcg
gcaaaagttaacggaatagttgtgccgaagaaattggagccaaagacaaaggcatcaaaa
gaaaatgcagttgaaaactttttggcaaactcaacggacactgacaaaccgattgaaagt
gatgatgaaaagtcggaacatgaagaatacacggacgaacactatttgaaagaacaaaat
cagatgttcaaagatcaactattgcaagactcaagcgattcggaaatgaattcggactcc
gatcaaagggttaatggaaaaggtatttattccgaaacagaagattctgatcgatcgtct
gactcgaaccagtcgattatggaaaaattcctggcatctgaatcgaaaggtagtggccaa
aagtccacgaaagataaagaaggaaaatcgaaagcaggtaaagtttcgagcgacaacgaa
aagaaatcagagccaaaaaccaaagatgcagaaattgagaaaaacattgaccattttatt
gaagagctggacagcgacatcgaattcgatgcaagtgaatcggaaagtgtgtcagaagca
ccgagaaaaacccagtcaacgataggtaaacatatttttgccaatattgaaaaggacaaa
cagattttgattccaagcgatgaagaaaatgaaagcagtaagaagaaagacagtcagaca
caaaaaagcgaagctgattcaagtgaaaaagattcgagtgagattcttgacacaactatg
tttaagtcaagcaaaagcaacttaaccgcaactcaattgtcgaaggttttgcaaacaaat
cgcaacaaacaaacaaaatcacgagtttcacctgagtgtatcagtgtgagttcggatgac
gatctcgaaatcgagtctacgtctaaaaaagatggcaacgaagatgaggacgaggaaaaa
gaaaagcgcgtgacgagaaaactgttgcgacacgatcaacttgctgatgatactaagcag
gcacaacgtgaagaagctgatcggctcaaacgattggataagaaaaatgaacgattaaca
cagttcttagaatctcaacgccagtcgcaaagtgaaaccgaaaaatatgtcgatccaaat
caagtatgtttggatgtcgactcgaaagaaaatgtagaaattgttgtccatccagaaata
acgaaacacttgaaaccacatcaagtcgaaggtatcaaatttatgtacgactgttgctac
ggaagtgttgacaacatggacaaatattctggctcgggatgcatcttggctcattgcatg
gggctaggaaaaacacttcaactcatcacacttttgcacacagtaatttgttatactcaa
ctcaaaactgacaaagttcttgtcatttgtccaaaaagcacggtgatgaattggaaggag
gaaattgaacgttggcttggcgctattaaaaaaactcgacgattgaaagtcttctatttc
ccggaacagtctgacatcagttcaaaactgcaaacgttgagcgagtggagccagtgtgga
aaagatggcaataaacaggctggatgtttgttgttgggttatgaagccttccgagtgctg
gtgttctatcatgcttccaagaagagcctgcagatgtacagtaccaatgagttggaaaaa
attcgccaaaagattcataaatatttactggatccaggcgccgatttggttgtgtgcgat
gaggggcacatgattaaaaatcaaaagtccacaacaagtgcagccgttaacaaaatctcc
actagacgacgcatcgtactcaccggaactcccattcaaaataatctcaaagaatactat
tcaatggtgaatttcataaagccatcgttcttgggaacagaaaaagagtttgccaatttg
tatgtcaaccctatcaaaagtggtcaacacaaagattcatccaagagtgaaatcaaacac
atgaaacagcgctctttcgtgctacacaaaaaactctcgaaatttgttcaaagaaaagaa
gcagctctactgaaatcattcctgccagagaagtatgaatttgttttgttcattccgatg
acaaaaattcagacgaatctgtatgaatttttcttggaaaaccgaccgaaccaagatcaa
aaaggaaaaagtttgattccagactatactgtattgcggaagatttggacgcatccgaaa
gtattggaaaatgcatatttgaatgcaatccaaaataagaccaaagtaaaatcagctata
ccaacaacgtccacgacaaccactgcaaataatgatagcgatgacgatcaaccggatgat
gtgttcgacagtcaaacgggacaaatgtcagtaacttcagattggtggcgacaacatttg
actaaagaagatttggagaccatcttaccatcgaacaagctcaaaattttgttcgaaata
ctggcccgttgtcgacgcaataaagaaaagtgtttgatattttcggcattcgtggctgta
cttgatgttgtagaatttttcatgaaactaatcaacgaccaagagaaagatggaaacaaa
cctggccttgagacgttccgcggtccatgggaaattggcaaagactattaccgattggat
ggcaaaacagcaaagaaccatcgtcacaacatgattaccaactttaatgatcccaaaaat
gaacgaacaagagcatttttgatttcagcaaaagctgggggtcaaggtattaatcttatt
ggagccaatcgggttgttctactggatacgtcatggaatccgtcaaatgaccaacaaaat
attttccgagtattccgtttgggacaaaagaaaatttgttacatatatcgtctgatatcg
atgggcaccatggaggaaaaggtatattcacgatccgttacgaagcaagcaatgagttgc
cgtgtcgttgacgaacaacaatgcgatcgtcactataacatggccgaattgacagaactc
tacaccttgacaaaaccgaacatgaaggatcgacaaacgcccaatgttccgaaagatgat
ttgctcgcgtcattgctaatgcaatttccgcaaatggtgtacaagtatcacgaacatgat
tcattacttgaaaataaaggagaagaagaactgagcgaacaagagaaaaacgatgcatgg
gctgcgtacgaggcagatgttaaacgtaagaatgaaacgaatatgggtccatatagtaat
aatttcggcatgttaccaaactatcctgggcttggcacgtacgcgaattctttatttaat
aattacaacaatttgtcgggcttaaattatccgtataatatgtatggctcgtacaatcca
tatgcaaatgatttgatgcgtttcgataactattcacaattttataataatctaatgaac
gtagccggtacgtcaatgactaattacaatcagggcaatccgagtttattatcgccttca
catcagtcgtcatccgcgtcgagtccgtcaccaattatgaatagtttttcatcatcgtcg
cgaaattggatgcaatcaaatgcatcatcgacaaactacgcgaataatctattatcgtct
ttggcacaaacttcatcgtcatcaaagagtagctattcgtcatatctaaatagtttgtat
aatgcactaggcaccaacaatccgacggcgtcatcgtcatccgctgcaaatgcatcgtcg
tcgaaaacaccaccactaccaattaccggcaccgattacaaccagatggcctatttgcaa
aaacagcaattgtcacatttgtccgctacgagcccaagcagcagcacaacatcgatgaca
gtgaattcaagtgcacaacaaggacccaatgccttgcgaaatccattgctcacaaaagaa
ctatcaattccacgtaatttaactatgagcaatacaaaagagatgttcagtactactaac
ataccaacaagtgtcattacaaaatcgggagaaagatctacgccaagcgccagttcaacg
tcaccaaaccttcaaaatgatgcaagtaaatcaagtacggacacaaatatttcatcatca
attgataagacggacactagaccaacgaaaactaccagcgaacgtcatttgaccattaaa
aatgcggctaccataaatgctgaagcacgcggatcacccgatacgaccgcaaaaaatcaa
gcgcaaaataaatccatcagcaatggtgtgagttcaaccgtcagttcagccattgacagt
gtacggaaaacgaacaataaatctgcgaccagcggtatgacgatctctaccaatatgggc
attgtgtacccatcacaaaaacctatcaatcaatctactgcttcaacaagcaaaaacaca
acgaattcaattttattatcgaataccaagccaaaagataaatcaccacaaaatccaatc
tcagcaacatcatccgtcagctcgaagtcacaaccgttagcggcaatcattcggaagcaa
ccaattcaatcgacttcatcgaaatctgtagatccgacaaacgacgctgttgccgcgatt
aacaaaaacaaagccttaacggtgacagcacgaaatataacaccgacagcagcagctgca
gcaaaacccccggttactggtgttaacaatagtattacattaagtccgattccgaataat
gtatcgaaatactcgggaagttcgatgacaattacgccgcaagtgaatcaggtgaaagtg
catacgccacaacaaagtcgaacactcagcaaatcgaactcatcgtctccagttccgttg
gcaataacaaaggtgacatcgaatcatccaatcacaaagtcaccgataccgatggttgtg
accaaacccaatatattgagctcacgcaattcaaacacatcaaagacacttgtttccgtg
ccaaaactatcaaatgcaaccacaataaatacatcaggagtacgtattttgaacagtaat
caaagtttatcaccgaaagcaggaccacgaccgccgggattcaagccaattatagcacaa
actaaatcacaagcagttgcagcagcctcagcatcgattgcaaataaatctggaatgcaa
ataaaagaagtaacatctctcgcaggacagaaacccgttaatcgtcctagcccgcttgat
acacgcaagcgattagccaacgatcctattgcattgagtccagcaaaaaaaccaaagcca
atggctaagagttcaacgccacccggagtacgaaaaccaaggagctcattggcaggcatt
cgaatcaatatgcaaagccaaacccaacaggacaactcacaagttccggtaccagtcgaa
atcgtggagttagagtga
DBGET
integrated database retrieval system
