Contarinia nasturtii (swede midge): 116340940
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Entry
116340940 CDS
T08003
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116340940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cns03021
]
116340940
Transcription machinery [BR:
cns03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
116340940
Prokaryotic type
Archaeal type
TFE
116340940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Cas12f1-like_TNB
SAMP2
HTH_Mga
Motif
Other DBs
NCBI-GeneID:
116340940
NCBI-ProteinID:
XP_031623562
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MGDQVLVTEIPSSLKQLARFVVRGFYTIEDALIIDMLVRNPCMKEDDICELLNFDRKQLR
ARITVLKNDKILQGRLKMETGPDGKAAKVTYHFINYKTLVNVVKYKFDWMNKRINTSERD
ATSRASFKCINCQKTFTDLDAADLFDPMENEFRCTYCSSLVEEDKSALPQKDSRFLLAKF
NDQMQIYYDLLKAVENIKLSPECLEPEPIDIETIRGTNKALNRGGTNNGGEQWSGEATRN
QGFAVEETRVDVTIGDANPTEAVKTKERPIWMTESTIVSNENTNDTLDTSSQQAAQPIAS
RSRKENEDIMSVLLQHEKQPGKANTQDAAVRSLATSTNNSDSSDDEQEIENAQIPDIDVM
DTDSDGDETTVLVAGKPMPLDEVIDNEEIIAQMTPQEKDAFIQVWQETYSHMHD
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgggagatcaagtgttagtgacagagattccaagtagcttaaagcaattggcccgattt
gtggtgcgaggattttacacaattgaagatgcgctcataattgatatgcttgttcgaaat
ccatgtatgaaagaagatgatatttgtgaattattgaatttcgatcgtaagcaattgcgt
gctcgaatcacagttctgaaaaatgacaaaattcttcaaggacgactgaaaatggaaacg
ggcccagatggaaaagcagcaaaagttacctatcattttatcaattataaaacgcttgtg
aatgtcgttaaatacaaatttgattggatgaataaacgaatcaatacatctgaacgtgat
gcgactagtcgagctagtttcaaatgtataaattgtcaaaaaacatttaccgatttagat
gccgccgatctattcgatccgatggaaaacgaattccgatgtacatattgcagcagtttg
gtggaagaagataaatcagcgctaccgcaaaaagactcacgattcttattggccaaattt
aatgatcaaatgcaaatttattatgatttattaaaagcagttgaaaatataaaattgtca
ccagaatgtttggaacccgaaccgattgacatcgaaacaattcgtggcacaaataaagca
ctcaatcgcggtggaaccaacaatggcggtgaacaatggtcgggtgaagcgacacgaaat
caaggatttgccgttgaagagacacgagtcgatgttacaatcggtgatgcaaatccaacg
gaggcggttaaaacaaaagaacgaccaatttggatgactgaaagtacaattgtatcgaat
gagaataccaatgataccttggatacgtcgtcacaacaagcagcacaaccgatcgcatca
cgaagccgcaaagagaatgaagatattatgtccgtgctattgcagcatgaaaaacaaccg
ggcaaagcgaacacacaagatgcggctgttcgatcgttggccacctcaaccaacaacagt
gattcaagtgacgatgaacaagaaatcgaaaacgcacaaattcctgatattgatgtaatg
gacaccgattccgatggtgacgagacaacggtgcttgttgctggcaaacccatgccactc
gatgaggtgatagacaatgaggaaatcattgctcaaatgacgccacaagaaaaagatgcg
tttatccaagtatggcaagaaacatacagccacatgcatgattaa
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