Contarinia nasturtii (swede midge): 116340963
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Entry
116340963 CDS
T08003
Name
(RefSeq) ubiquitin conjugation factor E4 B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04120
Ubiquitin mediated proteolysis
cns04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116340963
04120 Ubiquitin mediated proteolysis
116340963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cns04121
]
116340963
Enzymes [BR:
cns01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116340963
Ubiquitin system [BR:
cns04121
]
Ubiquitin ligases (E3)
U-box type E3
116340963
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
GDH_C
Motif
Other DBs
NCBI-GeneID:
116340963
NCBI-ProteinID:
XP_031623608
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MSELTPEEMRARRLRRLGLIGGDILTTATSSTDNPIANTSELSENVAKPMNTAAKNLLNA
ETEEHDENEHKQKLQKFDNEGKMEIVLNNNELPATRPPHLPTLQMVMESKSMSNHLTQRS
RLLDQFEKQRIENKLNQNSTSSSAEIVIRNDVEMKTSDDNTEKAKSSDGESCIENMETDE
LPSAIESSLVAKTNLVDRVLSLEEKEREAEICLSRILDAFWYDNCEGSIIVSETAEFYKD
VVLDEGNKIQFDDLTFQIITEVVVQYFDGKRIDYKVSASDSMNKGSSSSWSVTMSNASER
MDTSESGCSTTPNLKPHNLADHGALTYLIQSYLRCCVEQERYNSTRNVQKFNSVVLDVIA
EVKKQLIISSKLLLNGTMVKQLRLSTHAQTHRSILLKMMYDDAVPSDFLNLLIEESYKEP
QIFDKIFGTLLQNLYVDMQSRVVSKVICTSPINILKQLLDITINGNIRPICNFVTSLPNF
CPVLCTQTQGREIVKAGFMGPFLSLSIFTEDNPKLGEDVDENWEETCGNSLRMHLDQMRG
QLHAIFHNLVRSPDNRTQVMKYLSQVLLSNEKRTQFHSEEKKLGRDGFMLNVMAVLQKLS
IKIKLDRVDPKYPFNAKSLVTIEKDTKIRFDDSEYKNWISSAINTRSTDPNPPNFSTECW
FLTLHTHHLAIMPAIQRYNKRLRAIKEIRRMIEELNNTKSQWENSMHRMRNNQLIERFSH
QLKKLNKAKKSCDVGLLDPIIIESCLRFYSSVCEFVLYQMEGRDVNGLFMTSISPQQLKP
VAVLSALPEWYVEDIADFILFNMQFRQEKMVTLFDDSIITWLLTCVCAPQCIRNPYVTAK
LVEVLFVISPSVQPNSGLQISVMNHPLVQTDLVGALMKFYTDIETTGQSTEFYDKFTIRY
HISHLFKTMWSNPMQRQVIVNESKNGAQFVKFVNMLMNDTTFLLDECLEYLKRIHETQAL
MLDEAGWNALGTENQQSRQRQLSQDERQCRSYLTLGKETVDMFHYLTIDIKEPFLRPELI
DRLASMLNFNMHQLCGPKCKDLKVRSPQKFGWDPRKLLSQLFDIYLHLSCDQFAAAIAAD
ERSFDKEFFEKEVAVRIKELHLRSSIEIEQFLDLVTRAQEKYIANQQIEDDYADAPDEFR
DPLMDTLMTDPVVLPSGNVMDRSIITRHLLNSSTDPFNRQPLTEDMLKPNNELRERILAW
KRDKREKTIQLNPIDKC
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagctaacgccagaagagatgcgagcgcgtcgcttgcgtcgtctcggtttgatc
ggtggagatatattgacaacagccacatcatcaaccgataatccaattgcaaatacatca
gagctaagcgaaaatgttgccaaaccaatgaatactgccgcaaaaaatctactaaatgca
gagactgaagagcacgatgaaaatgaacacaaacaaaaattacaaaaatttgacaacgaa
ggtaaaatggaaattgtactgaataacaatgagctaccagcgacacgaccaccacattta
cccacattgcaaatggttatggagtccaagtcaatgtcaaatcacttaacacaacgatct
cgtttgttggatcaatttgagaagcaacgcattgaaaataaactaaatcagaattcaacg
tcatcttccgctgaaatcgtcatacgaaatgatgtggaaatgaaaacgtccgatgataat
actgaaaaagccaaatcaagcgatggtgaatcttgtattgaaaatatggaaacggatgaa
ttaccatcagcaatcgaatcatcattggtggccaaaactaatctcgtcgatcgagtattg
tcactagaggaaaaagagcgtgaagcggaaatttgtttgtcgcgtattttggatgcattt
tggtatgataattgcgaaggatcaattatcgtttccgaaacggccgaattctacaaggat
gtggtgctcgatgagggcaacaaaattcaatttgatgacttgacatttcaaatcataacc
gaagttgttgttcagtattttgatggtaaacgcattgattacaaggttagcgcaagcgat
tcgatgaataaaggttcgtcatcgtcatggagtgtgacaatgtcgaacgcatcagaacga
atggatacaagtgaatctggttgttccacaacgcccaacttgaagccacacaatttagcc
gaccatggtgcattgacttatttaattcagtcatatttacgttgttgcgttgaacaagaa
cgatacaatagcacaagaaatgttcaaaaattcaactcagttgtattggatgttattgct
gaagtgaaaaaacaactaattatcagctcaaaattgcttttgaatggcactatggtcaaa
caattgagattaagtacacatgcacaaacacatcgatcaattctactgaaaatgatgtac
gacgatgcagtaccgtctgactttttaaatttattgatcgaagaatcgtataaagagcca
caaatttttgacaaaattttcggcactttactacaaaatctctacgtcgatatgcaaagt
cgtgtggttagcaaggttatttgtacatcaccaattaacatattgaaacaattgcttgac
atcacgatcaatggaaacattcgaccaatatgcaattttgtcacgagcttaccaaatttc
tgtccagttttgtgcacacaaacacagggccgtgaaattgtgaaggccggctttatggga
ccattcttatcgttgtcaatattcaccgaagataatccaaaacttggagaggatgtcgac
gaaaattgggaagaaacatgtggcaacagcctaagaatgcatttggaccaaatgcgtggc
caattgcatgcaatattccacaatttagtacgtagcccagacaatcgtacacaggtgatg
aaatatctttctcaagttctgttgagcaacgaaaaacgtacacaattccattcggaagaa
aagaaacttggacgtgatggattcatgttaaatgtaatggcagtacttcaaaagctatca
atcaaaataaaattggatcgcgtcgatccaaagtatccgttcaatgccaaatcactggta
acaattgaaaaggatacaaaaattcgctttgatgactccgaatataagaattggatctca
tcagcaattaatactcgaagcactgatccaaatccaccgaatttttcgactgaatgctgg
ttcttgacattgcatacccatcatttggccatcatgccagcaatccaacgctataataag
cgattgcgtgcaatcaaagaaattcgccgcatgattgaagaattaaacaacacaaagtct
caatgggaaaattcaatgcatcgtatgcgaaacaatcagctcatcgaacggttttcacat
caattgaaaaaactaaataaagcaaaaaaaagctgcgacgtcggcttattggatccgatt
atcatcgaatcctgtttgagattctacagttcggtgtgcgaattcgttttgtatcaaatg
gaggggcgtgatgtaaatggactgtttatgacatcaatctcaccgcaacagcttaaacca
gtggcagtattatcggcattgcctgaatggtatgtcgaagatattgccgacttcattctc
ttcaacatgcaatttcgacaggaaaaaatggtgacactttttgatgattcaatcatcaca
tggctattaacatgcgtatgtgcaccacagtgtattcgtaatccatacgttacggcaaaa
ttggttgaagtgctatttgtcatatcgccaagtgttcaacccaactcaggtctacagatc
tcggtaatgaatcatcctcttgttcaaactgatctggttggtgcattaatgaaattttac
acagatattgaaaccacaggccaaagcactgaattctacgataaattcacgatacgttat
cacataagccatttattcaaaaccatgtggagtaacccaatgcaacgtcaggtgattgtg
aatgaatcgaaaaatggtgcacaatttgttaagttcgtgaatatgctgatgaacgataca
acatttttgctcgacgaatgccttgagtatttgaagcgtattcatgaaacgcaagcactg
atgttggacgaagccggatggaatgcacttggtacggaaaatcaacaatcacgccaacgc
caattgtcacaagatgaacgacaatgccgttcctatttgacgttgggcaaagaaacggtt
gatatgttccattatcttacgatcgatatcaaagagccattcttacgtccggaattgatc
gatcgtttggcatcgatgctaaactttaatatgcatcaattatgcggaccaaaatgcaaa
gatcttaaagtgcgttcaccacaaaaattcggttgggatccacggaaattacttagccaa
ctgtttgatatctatctacatttgagctgtgatcaatttgctgcagctattgccgccgac
gaacgttcgttcgacaaagaattctttgaaaaagaagtggccgttcgtattaaagaatta
catttacgatcgtctattgaaatcgaacagtttcttgacttggtcactcgggcacaggag
aaatatattgccaatcaacaaattgaagacgattatgctgatgcaccagatgaattccgc
gacccattgatggacacattaatgacagatccagtggttttaccatcgggcaacgttatg
gatcgttcgattatcacacgacatttactaaatagcagcaccgatccattcaatcggcaa
ccacttaccgaagatatgctcaagccgaacaatgaactacgcgaacgcatattggcttgg
aagcgtgacaaacgcgaaaaaaccattcaactcaatccaatcgataagtgttaa
DBGET
integrated database retrieval system
