Contarinia nasturtii (swede midge): 116341102
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Entry
116341102 CDS
T08003
Name
(RefSeq) tetratricopeptide repeat protein 30 homolog isoform X1
KO
K19683
tetratricopeptide repeat protein 30
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cns03037
]
116341102
Cilium and associated proteins [BR:
cns03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
116341102
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IFT70_C
TPR_19
TPR_16
TPR_2
ANAPC3
TPR_YpiA
IFT56
Psidin_C
ARM_TT21_C
SiaC
TPR_EMC2
TPR_11
TPR_1
Motif
Other DBs
NCBI-GeneID:
116341102
NCBI-ProteinID:
XP_031623831
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MFHKKNEIRSGEYTKSIYLLINEQRYTDAISVLCKIPESTNCRAGLSLLGYCYYQCQEYI
EASNCYEQLCLLVPNEPGYKFAYAQSLFQSGLFEEAFKITTTIETPELREKILQLQCAIR
YFNEEYSSTQTILAQRNPYHESTLNDEGCLLFQANVFDEALQRFTAALQNGGFNPLTAYN
AAMCHYRRKENAQALNYISEIVERGIRNYPELGIGAQIENEGGARSVGNPPSLAASGLTQ
SLNLKAAIEYQEGNLDGAREALMDLPPRSEPELDPVTLHNLALTDTSGGIGTSLRRLAFL
LEIGPPTCPAETFANILLLSCKQEMYDTAADILAEHAHLTYKYLSTFLYDLLDAIITVQT
SREEADQKLEKLSARLTTKLRTLTAKIQEGRASNDDDIVKRTLREYEEELENYLPVAMAR
AWLYWLDDDFGTAEREFRSSAEFCSESPLWRLHAAHVLFMRGDKYKEAAAFYEPIVRQNY
GDILSVSAAVLGNLCVSYIMTSQNEEAEDLMRKVERAEEIKGNANGHCLHLCIVNLVIGT
LYCAKGNYEFGLSRIAHALDNATAGSRLCPDTWFYVKRCVLGLLTGLAKQTLVLPSVVIE
EVINLLYTCQSAHMPAVFETTSDENLDEPQTIGLEARKLNALLLQAIEYE
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtttcacaaaaagaatgaaattcgttctggtgagtatacaaagtcaatttatttatta
atcaatgaacagcgttatacggatgcaatatcagtgctatgtaaaatacctgaatcaacg
aattgtcgcgctggattatcgctactcgggtattgttactatcagtgccaggagtatatt
gaagcttcaaattgctacgagcaactgtgtttactagtcccaaatgaaccgggatataaa
tttgcatatgctcaatcattattccaatcgggactttttgaagaggcattcaaaataaca
acaactattgaaacacctgagttaagggagaaaatcttacaactgcaatgtgctattcga
tatttcaatgaggaatatagcagcactcaaaccatacttgctcaacgaaatccatatcac
gagtcaacgttgaatgacgaaggttgtttactgtttcaagccaacgtatttgatgaagca
cttcagagatttacagccgccttacaaaacggtggttttaatccattaacagcttataac
gcagctatgtgtcactatcgacgcaaagaaaatgcacaggctctaaattatatatccgaa
attgttgagagaggtattcgaaattatccggagcttggaatcggagcccaaattgaaaac
gagggtggcgcacggagtgttggaaatccaccttccttagcagcatctggtttaacacaa
agcttgaatcttaaagcagccattgagtatcaagaagggaatttagatggggcccgagaa
gctttaatggacttacctccgaggtcagagcctgaacttgatccagttacgttgcataat
ctagctttaactgatacatctggaggaattgggacaagtttaaggcgcttggccttttta
cttgaaataggcccaccaacatgccctgcagaaacatttgcgaacattctgctgttgtct
tgcaaacaagaaatgtatgatacagccgccgatatattagctgaacatgctcatcttaca
tacaaatacttgtcaacttttttgtatgacttactcgatgcaatcatcactgttcaaacc
agtcgtgaggaggctgatcaaaaactagaaaaactatcggcacgtttaaccaccaaattg
cgtacattgacggcaaaaatacaggaaggtcgcgcttcaaatgatgatgatatagttaaa
cgaacacttcgagaatatgaggaagaactggagaactatttaccagttgccatggctaga
gcatggttgtattggttggatgatgatttcggaacggctgagagagagtttcgaagttcc
gctgaattttgttccgaatcaccgttatggcggttgcatgccgcccatgttctattcatg
cgtggcgataaatataaagaagcagcagcattttatgaaccaattgttcgacaaaattac
ggtgatattttgagcgtatcggcggcagtattggggaatttatgtgtttcgtatataatg
acctcgcaaaatgaagaagctgaagatttaatgcgtaaagttgaacgagcggaagaaata
aaaggcaatgcaaacggacattgcttacatttgtgtattgtgaatctggtcatcggcact
ttatattgtgcaaagggaaactacgaatttggactatcacgaatagcacacgctttggat
aatgcaacggcaggatctagattatgccctgacacctggttttatgtcaagagatgtgtg
ttgggacttttgaccgggcttgcaaaacaaacattagtgctaccttctgttgtaattgaa
gaagttataaacttattgtatacatgccaaagtgcacatatgcctgctgtttttgaaact
acatctgatgaaaatctcgatgaacctcaaacaattggcttggaagcaagaaaactgaat
gctttgctgttacaagccattgaatatgaatga
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