Contarinia nasturtii (swede midge): 116341214
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Entry
116341214 CDS
T08003
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04140
Autophagy - animal
cns04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116341214
04148 Efferocytosis
116341214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cns04131
]
116341214
Membrane trafficking [BR:
cns04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
116341214
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
Clathrin
zf-RING_Vps41
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_HPS5
zf_RING_Vps8_fungal
Beta-prop_RIG_2nd
zf_RING_Vps8
WD40_Prp19
WD40
ANAPC3
zf-RING_5
WDR55
SLX1_C
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
116341214
NCBI-ProteinID:
XP_031624004
LinkDB
All DBs
Position
Unknown
AA seq
837 aa
AA seq
DB search
MSANTTIMQENESSDEEEIEPKLKYVRISNDLKRILNKDAVSCIAVHSKFLCIGTHWGAV
HLLDHQGNTVENSINNSQDFPAHMVSVNQISIDNKGEYIGTCSDDGTVVISGFYTDENNH
KMKFGRAVKTIALDPIYYKSGSGRRFIIGDNKLTLHEKTFLKGIKQTVLCEAEGVVSAIA
WTDHFVAWASAIGVRVYDLNEKCSLGLIKWEEPKNQLLNDFRCNLKWSNSTTLLIGWVDI
VRICVIRKRNSVEVSTRGLPDFIVDPISTFQMDCYICGLGPLESDQLVVLGYPKEKDSET
NKALRPILLVIQYKSYDYEEICTNSLSLRGYSEYKVNDYHLDTLIEENQYFIVSPKDIVV
ASLYENDDRIKWLIEHEKFDQAMQVITEHGGKYSLVSVARLYLDHLLAQKKYDEAAKLCQ
TIFGNDKVLWEEEVFKFVKVQKLRSVSQYLPRGNDCKLKPHVYEMVLYEYLQFDAAGFLM
LIKEWEPSLYNTSAVINAVHEQFNERDKDILLESLALLYSYEHKYEKALTMYLKLQHKDV
FKLIKKHNLYDVIYRTIVPLIQLDSEQAVAMLLERNKIPADVVVSQLQNHEEYLYMYLDA
FDKVDNSGRFHAKLVHLYAKYNREKLLPFLKRSNSYPIEEALSVCTSKLFYPEMVYLHGR
MGNTIEALSIIINKLDNIQMAIDFCKEHDDIDLWNELINQSLDRPEIMTKLLDGIAGFIN
PEILVNKIKMGQCIPGLKESLVKMLCDLRLQVSIQDGCNDILVGDYFQLHDRHVRCQQKA
VYISNDNICGLCQKDIILKDQMKMKIIAFNCRHFFHEMCLPDKYNIDYCTVCKSKKP
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaaatacaacaataatgcaagagaatgaaagttccgatgaagaggagattgaa
ccaaaattgaaatatgtccgcatatcaaatgacctaaaacgaattctgaataaagatgca
gtcagttgcattgctgtgcattcaaagtttttatgcatcggaacgcattggggtgcggta
catttattggatcatcaagggaacaccgttgaaaattcaataaataattcccaagatttt
ccagcgcatatggtttccgtgaatcagatctcaattgacaataaaggcgaatacatcggt
acatgctctgacgatggtacggtggtaatcagtggtttttataccgatgaaaataatcat
aaaatgaaatttggacgagctgtgaaaacaattgcactcgatccaatttattataaatcg
ggatccgggcgtcgtttcatcattggtgacaataagttaacattgcatgaaaaaaccttt
ttgaaaggtatcaaacaaacggttctatgtgaagccgaaggtgttgtatcggctattgca
tggaccgatcattttgtggcatgggcaagtgcaattggtgtgcgtgtctatgatttgaat
gaaaaatgttcgctgggattaattaaatgggaagagccaaaaaatcaattgctcaatgat
tttcgatgtaatttgaaatggtcaaattctaccacactcctaatcggatgggttgatatc
gttcggatttgtgtgattcgaaaacgcaattcggtggaagtttcaacacgcggactacct
gatttcattgttgatccaatctcaacatttcaaatggattgttatatctgtggcctggga
cctctcgaaagcgatcaattagttgtgttaggctatcccaaagaaaaagattccgaaaca
aataaagcgctacgcccaattttgttggtcattcaatataaaagttacgattacgaagaa
atttgcacaaacagtctatcattaaggggatattcagaatataaggtcaacgattaccat
ttggatacgttaatcgaagagaatcaatatttcattgtgtctccaaaagatatcgttgtg
gctagtttatatgaaaatgacgaccgaattaaatggcttatcgaacatgaaaaattcgac
caagcaatgcaagtgataaccgaacatggtggcaagtattcgttggtaagcgtagctaga
ttatatttggaccatttactggcgcagaagaaatacgatgaagccgctaaattgtgtcaa
acaatcttcggcaatgacaaagtattatgggaggaggaagtattcaaatttgtaaaagta
caaaaattacgatcggttagtcaatatcttcctcgtggaaatgattgtaaactgaagccg
cacgtttacgaaatggttctgtatgaatatctacaattcgatgcagccggattcttaatg
ttaataaaggaatgggaaccatcgctttacaatacatcggccgtaataaatgcagttcat
gaacaattcaatgaacgagacaaagacattttactagaatcattggcacttttatattca
tatgaacacaaatacgaaaaagcattgacaatgtatttaaagctgcaacacaaggacgtg
tttaaattgataaaaaagcataacttatacgatgtaatctatcgcacaatcgtgccatta
attcagttggatagtgaacaggccgttgcaatgttattggagcgtaacaaaatcccagcc
gatgtggtggtatctcaactgcaaaatcacgaggagtatttatacatgtatcttgatgct
tttgacaaagtcgataattcgggacgatttcatgcaaagttggttcacctctatgccaaa
tataatcgtgaaaaattgttgccgtttttaaagcgatccaacagctatcctatcgaagaa
gcgttgagcgtgtgtacgagtaaattattttatccagaaatggtgtatttacatggtcga
atgggcaatacgattgaagcattgtcaattatcatcaataaattggataacattcaaatg
gcaattgatttttgcaaagagcacgatgacatcgatctatggaatgagttgatcaaccaa
tcacttgatcggcccgaaattatgacaaaattattggacggaattgccggtttcattaat
ccagaaattttagtcaataaaatcaaaatgggacaatgtataccaggtctgaaggagtcg
ctggtgaaaatgttgtgtgatttacgattacaagtatcgatacaagatggttgcaatgat
attttggtgggtgattattttcaacttcatgatcgtcatgtacgatgccaacaaaaagcg
gtttacatttcaaacgataatatatgtggattatgccaaaaggatatcattctaaaagat
cagatgaaaatgaaaatcattgctttcaattgtcggcactttttccatgagatgtgtttg
ccagacaaatacaatattgactattgcacggtatgcaaatcgaaaaaaccataa
DBGET
integrated database retrieval system
