Contarinia nasturtii (swede midge): 116341350
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Entry
116341350 CDS
T08003
Name
(RefSeq) eukaryotic initiation factor 4A-like isoform X1
KO
K03257
translation initiation factor 4A
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cns03019
]
116341350
03012 Translation factors [BR:
cns03012
]
116341350
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cns04147
]
116341350
Messenger RNA biogenesis [BR:
cns03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
116341350
mRNA cycle factors
Stress granule specific factors
116341350
Translation factors [BR:
cns03012
]
Eukaryotic type
Initiation factors
eIF-4
116341350
Exosome [BR:
cns04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116341350
Exosomal proteins of bladder cancer cells
116341350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
CMS1
AAA_30
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
116341350
NCBI-ProteinID:
XP_031624210
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MSYLYDRSRNDDSINDSDMYHPSGLEPDGIQIIESNWSEIIDNFDDMSLKEELLRGIYGY
GFERPSAIQQRAILPCVRGRDVIAQAQSGTGKTATFSIAILQQIDTSILDCQALILAPTR
ELATQIQKVVIALGDYMNAECLACIGGTNVNEDMRKLDMGTHIVVGTPGRVYDMISRKVL
RTKSIKLFVLDEADEMLSRGFKDQIYDVFKLLPSDVQVILLSATMPNDVLDVSKYFMREP
VRILVKKEELTLEGIKQFFVNVEREDWKIGTLCDLYETLSITQSVIFCNTRRKVDYLTEE
MSANNFTVSALHGDMDQRERDLIMKQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPS
NRENYIHRIGRGGRFGRKGVAINFVTEKDKRTLQDIETFYNTRIEEMPANVADLF
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatttgtatgatcgaagcagaaatgatgattcaatcaacgattctgacatgtat
cacccgagcggtttggaaccggatggtattcaaattatcgagagcaattggagtgagatt
attgacaattttgatgatatgagtttgaaagaggaacttttacgtgggatttatggttat
gggtttgagcggccgtcggccattcaacagcgcgcaattttgccgtgtgttcgtggtcgt
gatgttatcgcccaggcacaatcaggtaccggaaaaacggctacattctctatagcaatt
ctgcaacaaatcgacacatcgattcttgattgccaggcattgattttggcacccacgcgc
gaacttgcaacgcaaattcaaaaagtggtcatcgctcttggtgactacatgaacgcggag
tgtttagcatgcatcggcggaaccaatgtgaatgaggatatgcgcaaattggacatggga
acccatattgtggtaggcactcctggtcgcgtgtatgatatgattagccgaaaagtgctt
cgcactaaatctatcaagctatttgtgctcgacgaagccgacgagatgctaagcagaggt
ttcaaggatcaaatttacgatgtttttaaattgttaccgtctgatgtccaagtaattttg
ctctcagcaacaatgccgaatgatgttttagatgtgagcaagtattttatgcgcgaaccg
gttcgaattcttgttaagaaggaagagctcacattggagggcatcaaacaattttttgtg
aatgtcgaacgcgaagattggaaaattggcaccctatgtgatttatacgaaacgttgtca
attacacaatccgttatattttgtaatacacgacgcaaagtcgactatttgacggaagag
atgagtgcaaataattttacggtgtcggcattgcatggcgacatggatcagcgagaacgt
gatttgatcatgaaacaattccgaagtggatcatcgcgagtattaattacaactgatcta
ctggcacgaggtattgacgtgcaacaagtttcgttggtcataaattatgatttgccatcg
aatcgggaaaattatatacacaggattggtcgcggaggtcgttttggacgcaaaggtgtt
gccatcaattttgtaacagaaaaggataaacgtactctgcaagacattgaaaccttctac
aatactcgtatcgaggaaatgccggcgaatgttgcagatcttttctaa
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