KEGG   Contarinia nasturtii (swede midge): 116341401
Entry
116341401         CDS       T08003                                 
Name
(RefSeq) ras-related protein Rab-5C isoform X1
  KO
K07888  Ras-related protein Rab-5B
Organism
cns  Contarinia nasturtii (swede midge)
Pathway
cns04137  Mitophagy - animal
cns04144  Endocytosis
cns04145  Phagosome
cns04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:cns00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    116341401
   04145 Phagosome
    116341401
   04137 Mitophagy - animal
    116341401
   04148 Efferocytosis
    116341401
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cns04131]
    116341401
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cns04147]
    116341401
   04031 GTP-binding proteins [BR:cns04031]
    116341401
Membrane trafficking [BR:cns04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    116341401
 Endosome - Lysosome transport
    116341401
Exosome [BR:cns04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   116341401
  Exosomal proteins of other body fluids (saliva and urine)
   116341401
  Exosomal proteins of colorectal cancer cells
   116341401
  Exosomal proteins of melanoma cells
   116341401
GTP-binding proteins [BR:cns04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    116341401
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA GTP_EFTU RsgA_GTPase MMR_HSR1 Tfb2_C AAA_16 YKL023C-A GluRS_N
Other DBs
NCBI-GeneID: 116341401
NCBI-ProteinID: XP_031624342
LinkDB
Position
Unknown
AA seq 301 aa
MLLIKKSFLDFPKWIGSNSSASLNVNGQVILIWEISSNSARLAMRFMKLAYTQNNSQFFK
ECACERFIIKKKNTEDIENKFRKMASTPRGNAAQRPNGSAQGKICQFKLVLLGESAVGKS
SLVLRFVKGQFHEFQESTIGAAFLTQTVCMEDTAVKFEIWDTAGQERYHSLAPMYYRGAQ
AAIVVYDIQNQDSFQRAKTWVKELQRQASPNIVIALAGNKADLTNSRVVEFEEAKQYAEE
NGLLFMETSAKTAMNVNDIFLAIAKKLPKNEGAGSQGNGQGRRLNENEQNRQPNSSINCC
K
NT seq 906 nt   +upstreamnt  +downstreamnt
atgttgctaattaaaaaatcatttcttgattttccaaaatggattggtagtaattcaagt
gcaagtttaaatgtaaatggtcaagtcattttgatttgggaaatttcaagcaattcagct
cgattagcgatgcgcttcatgaaacttgcatacacacaaaataattctcaattttttaaa
gagtgcgcttgcgaacgcttcataataaaaaaaaaaaacaccgaagatattgaaaataaa
tttcgaaaaatggcatcgactccacgaggaaatgctgcgcaacgaccaaatggatcggca
caaggaaagatctgtcagtttaaattggttcttttgggtgaatcagctgtaggaaaatca
tcattggtactgcgattcgtcaagggtcaattccatgagttccaagaaagtacaatagga
gcagcattcttgactcaaactgtttgtatggaagacacagccgtcaaattcgaaatatgg
gatacggctggtcaagaaagatatcacagcttagctccgatgtattatcgaggagctcag
gcagctatcgttgtctatgatattcaaaatcaggatagttttcaacgtgctaagacttgg
gtgaaagaacttcaacgacaggcttcaccaaacatcgtgattgctttggccggtaataaa
gctgatttgacaaacagccgcgttgtagagtttgaagaagctaaacaatatgctgaagaa
aatggattactatttatggaaacatcagccaaaactgcaatgaatgttaacgatattttt
ttggcaatcgctaaaaaattgccaaagaatgagggtgccggaagtcaaggaaacggccaa
ggtagaaggctaaatgaaaatgaacaaaaccgacaaccaaactcctcaataaattgttgt
aagtga

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