Contarinia nasturtii (swede midge): 116341800
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Entry
116341800 CDS
T08003
Name
(RefSeq) septin-interacting protein 1
KO
K13103
tuftelin-interacting protein 11
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cns03041
]
116341800
Spliceosome [BR:
cns03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
116341800
Other components
Complex C specific factors
116341800
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
116341800
NCBI-ProteinID:
XP_031624957
LinkDB
All DBs
Position
Unknown
AA seq
812 aa
AA seq
DB search
MSDTEYEKFEINDYDLENEFNPNRMGRRRPTKNQQIYGIWADDDSDDDAGQSTSKGRNRT
NVRKAKDYAAPIGFVAGGVQQSGKKKDEETMKSDEEKSNDDKGGNTSSESESEARPQISF
GGGKKNQSSFQFTSNSISNRGLGGWEQHTRGIGAKLLLQMGYEPGRGLGKDLQGISQPVQ
AHVRKGRGAIGAYGTEQPGQTIGDAKSNKPKIDDDEREAKEFKEKMDQWRKDTNDSKSKK
KRNYKSVEDIIEKGKKPTYILSDKLSSKMNTVVIDMTGPEKRVLSGYHALGQTKVADENL
YKERTVKECTNFSLPELTHNLDLILDLCEQEIIQIDKNQKTASDRKVVLRQDRDSLEKIV
KLEQDHIETIEHVLELVESLTSPKQPLTLSESAEIFMGILNDYPDEYIEFGLSDLVPGVI
APLFQQELREWDVFEMPAYPVKLIQRFEFLNDNKSENNIFSPYSSLIWFGIIPNIRTAIN
EWNPRNHEPMANLLDIWAKLFPAHILDNVLEKQILPRIVKGVELWDPTTDTLPVHFWVTP
WHTLLGASMKETVYPVIMEKLSKALVSWSPSDGSARNIISPWSGIFPDSDFQNFLQKNIV
PKLQLVLSELIINPLHQDMHQFKCVWEWHELISTSAMSQMLSKYFFPKWMQTLVIWLNQN
PNFEQVSRWYSGWKSQFSDEILQQNTIKEHFRRALDLMQRSTGAILPSNMQIPTPIIEPI
VNVPPPPSLMDLHIAPAPQLEFKELVSQKCAERGIIFAPMPGRREHGKQVYRVGKLFCYI
DRTVVMLSDGSFVNWIPVSINSLLDRAITGAF
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaccgaatatgaaaagtttgagataaacgattacgatttggaaaatgaattc
aatccaaatcgaatgggtcgaaggcgaccgacaaaaaatcaacaaatttatggaatttgg
gctgatgatgacagtgatgatgatgctggacaaagcacatctaaaggtcgaaaccggacc
aatgtacgcaaagcaaaagattatgcggcgcccattggttttgttgccggtggcgttcaa
caatcgggaaagaaaaaagacgaagaaaccatgaaatcagatgaagagaaatcaaatgat
gataagggcggcaatacatcaagcgaatcggagagtgaagcaagaccacaaatatcgttt
ggtggcggcaagaaaaatcaatcgagttttcaattcacatctaattcaatatcgaatcgt
ggtttgggcggatgggagcagcatactcgtggtattggggccaaacttttacttcaaatg
ggttacgagccgggaagaggtttaggcaaagatttacaaggtatttcacaacccgtacaa
gctcatgtgcgaaaaggacgtggtgctattggtgcttatggcaccgaacaacctggtcaa
acgattggcgatgcaaaatcaaataagccaaaaattgacgacgatgaaagagaggccaaa
gagtttaaagagaaaatggaccaatggcgaaaagatacaaacgactcaaaatcgaagaag
aagcgaaactataaaagtgtcgaagatattattgagaaaggaaagaaaccaacttatata
ctttcagataagttgagttcaaagatgaacaccgttgtgattgatatgactggtcctgaa
aagcgtgtattaagtggttatcatgcactaggtcaaactaaagtagccgatgaaaacctg
tataaggaacgcacggttaaggaatgtaccaattttagtttgccagaactgacacacaat
ttggatctgatactggacttgtgcgaacaggaaatcattcaaatcgataaaaatcaaaag
acagcttccgatcgaaaagttgtgttgcgtcaagatagagacagtttggagaaaattgtt
aaattagaacaggatcatattgaaacgattgagcatgtgttggaattggttgaatcattg
acatcaccaaagcagccgttaacattgagcgaatcagcagagattttcatgggcatactc
aatgattatcctgacgaatacatagagtttggactttcggatttggttcccggtgtgatt
gcaccattatttcaacaagaattacgtgaatgggatgtttttgaaatgcccgcttatcca
gtgaagcttatccaacgctttgaatttttaaatgataataaaagtgaaaataacattttc
agtccatattcgtcgttgatttggtttggcattattccaaatattcgcacagccatcaac
gaatggaatccaagaaatcatgaaccaatggccaatttgcttgatatttgggcaaaatta
tttccagcccatatacttgataatgttcttgaaaaacaaattctaccgcgaattgtaaag
ggtgttgaactatgggatccgactacggatactcttccggtccatttttgggtcacacct
tggcacacgttactcggcgcaagtatgaaggaaactgtttatccagtgattatggaaaaa
ttgagcaaagcacttgtttcatggtcaccatcagatgggtcagcacggaacataatttca
ccttggagcggcatttttccagattcagactttcaaaattttttacaaaaaaatattgtt
ccgaaattgcagttagttttatccgaattaatcatcaatccacttcatcaagatatgcat
caattcaaatgcgtatgggaatggcatgaattaatatcaacatcggcaatgtcacagatg
ctttccaagtattttttcccaaaatggatgcaaacccttgtcatttggctcaatcagaat
ccaaacttcgagcaagtttcacgatggtattcgggatggaaatcacaattttccgatgag
attctacaacaaaatacaataaaagagcatttccgtcgtgctctcgatttaatgcaacgt
tcaaccggcgctattctaccgtcaaatatgcaaattccaacaccgattatcgaaccaatt
gtgaatgtaccaccgccaccatcacttatggatttacatattgcaccagcaccacaactc
gaattcaaagaactggtttcacaaaaatgcgcagaacgtggaatcatttttgcaccgatg
ccgggtcgacgggaacatggcaaacaggtctatcgtgttggcaaactattttgctacatc
gatcgcactgttgtgatgttgagtgacggtagtttcgttaattggataccagtttcaata
aattcgctacttgaccgagccattaccggagcattttaa
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