Contarinia nasturtii (swede midge): 116341845
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Entry
116341845 CDS
T08003
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1G isoform X1
KO
K04854
voltage-dependent calcium channel T type alpha-1G
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cns04040
]
116341845
Ion channels [BR:
cns04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
116341845
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
YVC1_C
COX16
Motif
Other DBs
NCBI-GeneID:
116341845
NCBI-ProteinID:
XP_031625016
LinkDB
All DBs
Position
Unknown
AA seq
2514 aa
AA seq
DB search
MEASRSINHETETEATCSSAHNCNNASIIQNPGIRYDLRKPQSSSSSAAPNVLLHSPSSR
YDNGYSGGGGVGRSKSGDRSTFHALHYENPNDIIITNRKMHTANLNRTRRASRTTRGRGG
MHDINDSYSSKSSASSYSSTCSASSCDGSETSSNSSGEPNLPYPGFPELSLNYLTQDMRP
RNWCLLLITNPWFERISILVILFNCVTLGMYQPCVDDECVTNRCKILQTFDDIIFAFFSL
EMSIKMVAMGVYGKNTYLADSWNRLDFFIVLSGGLEYCLNMENLNLTAIRTIRVLRPLRA
INRIPSMRILVMLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLWEGILRQRCVLQLPDHVA
APKDLPDDYRVRVRINSISYYYEFSKEQDYICSKPADSGMHMCNELPPYRIGPMVCNASA
EPYSYNFPTNMSCVNWNQYYTNCTQLGGNPFQGTISFDNIGMAWVAIFLVISLEGWTDIM
YYVQDAHSFWDWIYFVLLIVIGSFFMINLCLVVIATQFSETKKREMERMRQERARYTSTS
TIASSTNNSEPSTCYAEIVKYIAHLSRRIKRRLIKKLRTYKYKHQDEDLLPNADTFTLSP
HRIKCHHPNCPKVNQNKTPTMDGGARRLKSQMADTNSISGTIIQNNCNSSQLSSPDMSEA
NEMHRFSSSSMNLAAAAPTTTAGNDDKDDKNKLSLLKIPGVIKTEQQAQSTNGSGEYLSP
PSSARRRSSVMFNDLLFLHTPPNEAQTNVKNISQVEKTTQTGDGNIWKVNLGHNLYSHAM
NNILTDCSDLNFNDTMTCQELLAFSVAFSAALPTNQNTLDSLYSSLAHHENNSRNSERMP
KNVSNSDVINRQTSTVVTTAAATTATTATATVVGTTTTTAPPNGLENFSCCYHLYQNSAH
VESLMSSHRKPNKYMAPIVAGWRMFSKIMSYMRRCIKMLVEHKYFQQGILLAILINTLSM
GIEYHDQPDELTTIVETSNIVFSGIFAVEMLLKVIAEGPFRYIANGFNVFDGVIVILSVF
ELGQQFFGISEGSSGLSVLRTFRLLRILKLVRFMPNLRRQLFVMLRTMDNVAIFFSLLML
FIFIFSVLGMYLFGSKFCKFTDEITGQERPCTCPEIINKHPHCECDRKHFNNILWSLVTV
FQILTQEDWNVVLFNGMEKTSHWAALYFVALMTFGNYVLFNLLVAILVEGFSSERNERRE
REQRELVKKLREEHENLSDLMFEDYRSCSDSISSSDNFQEMRNKWHSAEDVRKSRKIRAQ
LQKEHEEKSIANNSHRQTQAMVYVYVNNDTHSDNELSKSKQSIDADIDKIVLENKHFRMS
PKDNAAGSSRGRKMGKRNPPIITTTAATPQDSPIATLAHGMSFSEWENNCLKPPSIVGSV
KGLNNLLTPEPYPSKRKIESPSNRNANTCIDLEPKASISNIRLDRKDSTEAGSNQTGTKS
KSTKKSSIKKRSSTKRKESKPLPINYETDMLDSERLDSLSNMDVMHKSGKRLQNNSKNTN
KISPRGRQYDPNEFCANPQQQQQQQQQQPPTPMYSHRGSKVYRRRMSTMDPQAFKNLANL
DLKQLEMLRERALRREEEMKATTTTEAKEEAPVCKGFFHEPFKFTTAALRKHFEVLTEHR
QTYSLLIFPEDNKFRHACDWFVTQKWFDNVILLFIALNCITLAMERPNIPPNCTERYFLS
TANYVFTFVFTLEMFVKVVAAGMFKGPNAYFNSGWNIMDGSLVTISIIDLLMSLLSQSSP
RIFGILRVFRLLRSLRPLRVINRAPGLKLVVQTLLSSLRPIGNIVLICCTFFIIFGILGV
QLFKGTFYYCEGISVKHVKNKTDCLSIPGNVWINRKYNFDDLGKALMSLFVLSSRDGWVN
IMYTGLDAVGVDQQPIVNFNEWRLLYFIAFILLVGFFVLNMFVGVVVENFHRCREEQEKE
EKIRRAAKRAVQMEKKRKRMHEPPYYTNYSPLRLFVHNVVTSKYFDLAIAAVIGLNVVTM
ALEYYMMPIALEYALKIFNYFFTAVFILEAIMKLVALGFKLYMKDKWNQLDVGIVILSVV
GIVLEELETKIIPINPTIIRVMRVLRIARVLKLLKMAKGIRALLDTVMQALPQVGNLGLL
FFLLFFIFAALGVELFGRLECSDDNPCQGLGEHAHFANFGMAFLTLFRVATGDNWNGIMK
DTLRDDCDDAADCVRNCCVSPVIAPIFFVIFVLMAQFVLVNVVVAVLMKHLEESHKQIED
DEFDMEELEREMVQAQKFEEEQALCMQLDDSSVPRRTMPKVLSLPSNFTYTSPIFENRFN
SRRQTVFGDGSRFSDFSRASVDERMAEIELGEMKPKTKRRRSSSGMSTRDKEISVSRTPN
VRPKLNREISLDERQMTAKSTTAHKLTDVKRTSCDQLLVRDDKTTNFYHKPNAKPNEMKG
ASKVKTEKLSSSKDSMVMAAENARVSLYRRSSLKSDYGKPNTANTLLSLSKAQSVSGRSG
SCRQLFKQHAMDDEADIDENSLLLPMLNKPQIQHNEPKNAKETSLFNKTTNENE
NT seq
7545 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaagtagatcgatcaatcatgagaccgagaccgaagcgacttgtagttcagcc
cataactgtaataacgcgtcgataatacaaaatccaggcataagatatgacttaagaaag
ccacaatcatcgtcatcatcggcggcaccaaatgtgctgttgcattcaccgtcatcacga
tatgataatggatatagtggcggtggcggtgtcggaagaagtaaaagtggtgaccgaagt
actttccacgcattgcattatgaaaatccaaacgatataatcataacaaatagaaaaatg
cacacagcgaatttaaatcgaacgagaagggcaagccgaacgacaagaggtagaggtggt
atgcacgatataaatgattcgtatagctcaaaatcatcagcatcatcgtatagttcaaca
tgttcggcgagctcatgtgacggcagcgaaacgagctcgaattcatcgggtgaaccaaat
ttaccatatcccggctttccagagctctctttgaactatctaacgcaggacatgcggcct
agaaactggtgtttgctactcattacaaatccatggttcgaacgtatttcaattttagtg
attttattcaattgtgttacgctggggatgtatcaaccgtgtgttgatgacgaatgcgtt
actaatcgttgcaaaatactccagacattcgatgatattatatttgcgtttttctccctg
gaaatgagcataaaaatggttgcgatgggtgtctatggcaaaaatacctatctggccgat
tcatggaatcgtttggattttttcatcgtactttcgggcggacttgaatactgtttgaat
atggaaaatttaaatctgacagcgatccgaactatacgtgtcttacgtccattacgagcc
ataaatcgaataccaagtatgcgaatactggtaatgctgttgctggatacattgccaatg
ttgggaaatgtattactgctgtgctttttcgtattctttatatttggtattgttggcgtt
caactatgggaaggtatattacgacaacggtgcgtgcttcaattgccggatcatgtggct
gctcccaaggatctaccggacgattacagagttcgagttcgaatcaattccatttcttat
tactatgagttttcaaaagaacaagactatatatgttcgaagccagcagactcgggaatg
catatgtgtaatgaattacccccatatcggataggaccgatggtatgcaatgcatcagcc
gaaccatactcgtacaattttccaacgaatatgtcgtgcgtcaattggaatcaatactat
acgaattgtacgcagttgggcggtaatccatttcagggcaccatcagttttgacaacatc
ggtatggcatgggttgcaatatttttagttatctcattggaaggatggactgatatcatg
tattatgtacaagatgctcactcgttttgggactggatctatttcgttttattaatagtg
attggatcattttttatgataaatctatgcctcgttgtcattgccacacaattttctgaa
acgaaaaaacgtgaaatggaacgaatgcgacaggagcgagctcgttacacatccacatca
acaatagcatcgagcacaaataattccgagccgtcaacatgctatgcggaaatcgtaaaa
tacattgcgcacttatcgcgccggataaaacgacgactaattaagaagttacgcacctat
aagtataaacatcaagacgaagatttgctgccaaatgctgacacatttacactatcacca
catcgaataaaatgccatcatccaaattgtccgaaagtaaatcaaaataaaacgcccacc
atggacggcggtgcaaggcgtcttaaatcacaaatggccgacacaaatagcatatctgga
acaataatacaaaataattgtaatagtagccaattatcgtcgccggatatgtcagaagcg
aacgaaatgcacagattctcatccagttcgatgaatctagcagcagcagcgccaactacc
accgccggaaatgatgataaagatgataagaacaagttgagcttgttaaaaattccgggc
gtcataaaaacggaacaacaagcgcagagcacaaatggatctggcgagtatttaagtcca
ccatcatcagcgcgccgtcgatcatcggtaatgtttaatgatctgctttttttacatacg
ccaccgaatgaagcacaaacgaacgttaaaaatatttcccaggtcgagaaaacaacacaa
accggagatggaaatatttggaaggtgaacttgggtcataatttgtattcacacgcaatg
aacaacattctaacggattgttcggatctgaatttcaacgatacaatgacatgtcaggaa
ttgttagcgttttcggtggcattttcggccgctttgccaaccaaccaaaacactttggac
tccttatattcgtcgttagcacatcacgaaaacaatagccgaaatagtgaacgaatgcca
aaaaatgtcagtaattcagatgtaataaatcgacaaacatcaactgtggtcacgacagca
gcggcaacaacagcaacgacagcgacggcgacggtggtgggaacgacaacaacaaccgca
ccgccaaatggtttggaaaacttttcctgttgctatcatttatatcaaaattcggcacat
gtcgagtcactcatgtcgtcgcatcgaaagcccaacaaatatatggcaccaattgtggcc
ggctggcgaatgtttagcaaaataatgagctacatgcgacgatgcatcaaaatgctagtc
gaacataaatattttcaacagggtattctgctagccattttaataaatacactgtcgatg
ggcatcgaatatcacgatcaacccgacgaattgacaacaatcgtggaaacgagcaatatc
gtcttttcgggcatatttgcagtggaaatgttgctcaaagtaattgccgagggtccgttt
cgttacatagccaatggattcaatgtatttgatggtgttattgttatattaagtgtattc
gaattaggtcaacaattcttcggcattagcgaaggcagttcgggattaagtgttttacgt
acgtttcgactgttaagaatcctcaagttggtgcgatttatgccaaatttacgacgacaa
ctattcgtcatgttacgcacaatggataatgttgcaatatttttctcgttactcatgttg
ttcatatttatatttagtgtgcttggcatgtatctttttggatcaaaattttgtaaattt
acggatgaaatcactggacaagaaagaccatgcacttgtcccgaaataataaacaaacat
ccacattgtgaatgcgatcgaaagcattttaacaacattctttggagtttagtcactgtg
tttcagattttaactcaagaagattggaatgttgtgctattcaacggcatggaaaagact
agccattgggcagcattgtatttcgttgcattgatgacattcggcaattacgtgctgttc
aatttactggttgccattttagtcgagggctttagctccgagcgaaatgaacgacgagaa
cgtgagcagcgtgagctagtgaaaaaattgcgagaagagcatgagaatttaagtgattta
atgttcgaggactatcgtagctgttccgattccatcagttcgagcgataattttcaagag
atgcgcaacaaatggcacagtgctgaggatgtccgaaaaagtcgaaaaattcgtgcacaa
ttgcaaaaggagcatgaagagaagagcatcgccaataattcgcatcgtcaaacacaagcc
atggtttatgtgtatgtaaacaacgacacacactccgataatgaactgtcgaaatcaaaa
cagagcatcgatgctgacatcgataaaattgttctggaaaacaaacatttcagaatgtca
ccgaaagataatgcggctggatcgagtcggggtcgaaaaatgggcaaaaggaatccaccg
ataataacaacaacggctgcaacgccacaagattcgccgatcgccacattggcgcacggt
atgagctttagcgaatgggagaataattgtctgaagccaccgtcgattgtgggcagtgtg
aaaggtttgaataatttactaacgcccgaaccatatccaagcaaacgtaaaattgaaagt
ccatcgaatcggaatgcaaacacctgcatcgatttagagcccaaagcgtcaatatcaaat
attcgattggatcgaaaggattcgaccgaagcaggtagcaatcaaacaggcaccaaatca
aaatcgacgaaaaagtcctccattaaaaagcgttcgagcaccaaacgaaaagagtccaaa
ccattaccgatcaactatgaaacggacatgctggatagtgaacgtcttgattcgctcagc
aacatggatgtgatgcataaatcaggaaaacggctacaaaataatagcaaaaatacgaat
aaaattagcccacgcggccgacaatatgatccaaatgaattttgcgccaatccacaacag
cagcaacagcaacagcaacagcaacctccaacgcctatgtacagtcatcgtggatcgaaa
gtctatcgtcgccgaatgtcaacaatggatccgcaagctttcaagaatttagccaattta
gaccttaaacaattggaaatgttacgagaacgagcattgcgacgcgaagaagaaatgaaa
gcgactaccaccactgaggccaaagaggaagcgcctgtatgcaaaggattctttcatgaa
ccatttaaatttacaacggccgccctacgaaagcacttcgaagtgctcaccgaacatcga
caaacctattcgctactcatttttccggaagacaataaatttcgacatgcgtgcgattgg
tttgtgacacagaaatggtttgataacgttattttacttttcattgcgctaaattgtata
acattagcgatggaaagaccaaatatcccaccaaattgtacagaacgatattttttatca
acggccaactatgtttttacatttgtattcacgctggaaatgtttgtaaaggttgttgca
gccggcatgttcaaaggtcctaatgcatatttcaattccggatggaatataatggatggt
tcgttagtcacaatttcaataatcgatttgttaatgtcattactcagccaatcgagtccg
cgaatatttggaattttacgtgtatttcgtttattgcgttcgcttcgaccgttgcgtgtt
atcaaccgagctcctgggttgaagctggtcgttcaaacacttttatcatcgttacgtccc
atcggtaatatcgtgctcatttgctgcacatttttcattatatttggaattttgggtgtg
caattgttcaaaggaacattttactattgcgagggcattagtgtaaagcatgtgaaaaac
aaaactgattgtctctcaatacccggcaatgtgtggatcaatcgtaaatataattttgat
gatttgggcaaagcgctaatgtctttatttgtgctatcgtcacgcgatggctgggtcaac
ataatgtatacgggtttagatgctgttggtgttgatcaacagccgattgttaattttaat
gaatggcgtcttctttatttcatcgcatttatattgttggttggcttttttgtgctaaac
atgtttgttggtgttgtcgttgaaaatttccatcgatgccgcgaagagcaagagaaagaa
gagaagattcgacgtgctgccaaacgtgccgttcaaatggaaaagaaacgaaaacgaatg
catgagccgccttactatacaaactattcaccgttgcgtttattcgttcacaatgttgtt
acatcaaaatattttgatttggcaattgctgctgtgatcggtttaaatgtggttaccatg
gctttggaatattacatgatgcctatcgcactcgaatacgcattgaaaattttcaactac
ttcttcacggccgtgttcattcttgaggcaattatgaaattagttgcgcttggctttaaa
ttgtacatgaaagataaatggaatcaattagatgttggcattgtgattttatctgtggtc
ggaattgtgctcgaggaattggaaacaaaaattataccaatcaatccgacaataattcga
gtgatgcgcgtattacgtattgcacgcgtactgaaattattgaaaatggccaaaggaatt
cgtgcattgctcgacacggtgatgcaggcattaccacaagtcggtaatttaggtttatta
ttttttctgttgttcttcatttttgctgcccttggagtggaattatttggacgattggaa
tgttctgacgataatccctgtcaaggtcttggagaacacgcacattttgccaattttgga
atggcatttttgactctgtttcgtgtcgcaaccggtgacaactggaatggcatcatgaaa
gacacactgcgtgatgattgcgacgatgcggccgattgcgttcgaaattgttgtgtgagt
ccagtgatagcgccgatatttttcgtgatattcgtgttgatggcgcaatttgttttggtt
aacgtggtggtagctgtgctgatgaaacacctagaagaaagtcacaagcaaatcgaagac
gacgaattcgatatggaagagcttgaacgtgaaatggtgcaagcacaaaaattcgaagag
gaacaagcattgtgcatgcaattagacgatagttcggtgccacgtcgaaccatgcctaaa
gtgctatcattgccatctaattttacgtacacttcaccgatttttgagaatcgattcaat
tctcgacggcagaccgtgttcggcgatggcagtcgcttctccgatttcagtcgggcgtcc
gtcgatgaacgtatggccgaaatcgaattgggagagatgaaaccaaagactaaaagacgt
agatcgagcagcggtatgtcaacacgtgacaaagaaatatctgtatcacgaacaccaaat
gtccgaccaaaacttaaccgcgaaatatcattagatgaacgtcaaatgacggcaaaatcc
acaacagcgcataagctcaccgatgtcaagcgtaccagttgcgatcagctccttgtgcgt
gatgacaaaacgacgaatttctaccacaaaccgaatgctaagccaaatgaaatgaaaggc
gccagcaaagtcaaaaccgaaaaactgtccagttcaaaggattcaatggtgatggccgcc
gaaaatgcaagagtctcactctatcgacgatcatcgttgaaatcagactatggaaaaccg
aatacggccaatacactcctttcgctatcgaaagcacaatcggtatcgggtcgatcgggt
agctgtcggcagctattcaagcaacatgctatggacgatgaagcggatattgatgagaat
tcattgttattgccgatgttaaataaacctcaaatccaacataatgaaccgaaaaatgct
aaagaaactagcctatttaacaaaaccaccaatgaaaatgagtga
DBGET
integrated database retrieval system
