Contarinia nasturtii (swede midge): 116341847
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Entry
116341847 CDS
T08003
Name
(RefSeq) Werner syndrome ATP-dependent helicase-like
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cns03032
]
116341847
03400 DNA repair and recombination proteins [BR:
cns03400
]
116341847
Enzymes [BR:
cns01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
116341847
DNA replication proteins [BR:
cns03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
116341847
DNA repair and recombination proteins [BR:
cns03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
116341847
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
RQC
ResIII
HRDC
Motif
Other DBs
NCBI-GeneID:
116341847
NCBI-ProteinID:
XP_031625025
LinkDB
All DBs
Position
Unknown
AA seq
1023 aa
AA seq
DB search
MDEDFDMEDALLMEAASQFDHHFEATKPSEEHLQCLQTNFGHSEFRPKQWDIIRSIIEDK
RDNCVIMPTGYGKSLLFQFPSVYTNGITLVVSPLISLMQDQVSALSVANISACFLGSAQS
DRNIECQVEAGDFRMVYASPEYINGERGNKLMKKLESKLTLVAVDESHCISAYGHAFRPE
YRKLGCIRKEIPSIPILAITATATQHVRDDIISSLRLKNPQNVSMGFDRPNIHFSFRNKT
RVWDDLKPFVTNVRGSVIVYVLTKKKSEEIANTLRSCGVDCEIYHAGIPMKKRRSVLDDF
TRDRLKVIVATVAFGMGIDKPDVRCVIHYGASKNIESYYQEVGRAGRDGQLSKAITFHEK
GDFGLHEWFLNENQEHQSERVITHLREIGQKMRDFCHTTMCRRKYLLEYFGSNTSQIRPR
SNCCDNCDSGSSRVTLSDKYEGIDDEGNYDFTENAYRLLKAMKITGKVNMAITVLRGSSE
KKALEFQKDKEIYGVGKIWSKEYWRHLVEQLKDNEYITIKKLPLPYRPIQVVSQLGLAWL
NKTNRDRLILVAKPEMYQYFRKKKQQAFENNNLKPSTSTKPATEVRQGIQSLMETKDIDD
YQMEMEMSDKHLEEILLGIRAILAENSDCMPYLVASNIAIQQMVEKKPVSVKEFKSYVID
GFSIAKIDKFASFFIDGIIKFMNNEFCLSKLLKTYPLKTKQSQLSPQETRHLHKLIRNNH
ALTDICKQINRTEPELIDEIVILIRTGFQVTKGHLAPLIGASDEILRYLKDNVTNEDFLN
LDNVSEVKAKFSTNPHITEPMLMLVLNYLKVRQFLQSISVPYFDVDENRLVNGHTLLGSK
TIAASQSQQNSQNETLSNASGSGHTPSDLDLSNQHDQSSMVLDLLEEDEDDFAAAIASFD
SATEIMAAKPLHASQKVNQHQEIKKFEAKQPTKMPSAHSKIPETKTETTTTTASTKRPKA
TLKKRPAATYAIQYLSDSDSDEPKADEQEPQKKRVMPQWLTSKRSTTTNSKPNPVQKKSS
FFG
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagattttgatatggaagatgcgctattgatggaagctgccagtcagtttgac
catcatttcgaagcgacaaaacccagtgaagaacacttacaatgtttgcaaacaaatttc
ggtcacagtgaatttcgaccaaaacagtgggatattattcgctcgataatcgaagacaag
cgtgacaactgtgtgattatgcccaccggatacgggaaatcgctgttgtttcaatttcct
tccgtttatacaaatggcatcacattagttgtgtcaccgttaatctcactgatgcaggac
caagtgagtgcattgagcgttgccaatatatccgcttgttttctgggttcagcacaaagc
gatcgaaatattgaatgtcaagttgaagccggagattttcgtatggtttacgctagccca
gagtatatcaatggagaacgtggaaacaaattgatgaaaaaactcgagagcaaactaaca
cttgttgctgttgacgaaagtcactgtatctctgcatatggtcatgcctttcgtccggaa
tatcgaaaattgggttgcattcgcaaagaaataccatcgattcccatattagcgataacc
gcaacagcaacgcaacatgttcgagacgatataatttcctcgttgcgattaaagaatcca
caaaacgtgtcgatgggttttgatcggccgaacattcacttttcatttcgtaacaaaaca
agagtttgggacgatttgaagccgttcgttaccaacgttcgtgggagtgtcatagtttat
gtattgacaaagaaaaagtccgaagagattgcaaatacattacgttcgtgcggtgtggac
tgtgagatctaccatgcgggtataccaatgaaaaaacgtcgaagtgttttggatgatttt
acaagagatcgtttaaaagtgattgttgcgacggtggcgtttggcatggggattgataag
ccagatgtacgctgtgtcatccattatggagcatccaagaacattgaatcatattatcag
gaagtcggacgagcaggcagagatggacaactcagcaaggccattacattccatgagaaa
ggcgactttggactgcacgaatggtttttgaatgaaaatcaagagcatcaatcagaaaga
gtgataacacacttgcgtgaaattggacaaaagatgagagatttttgtcatacaacaatg
tgtcgaagaaaatacctgctagaatactttggttcaaacacatcacaaatccggccacga
tcaaattgctgtgataactgcgacagtggttcgagtcgcgtcactctaagtgataaatac
gaaggcatcgacgatgaaggcaattacgatttcactgaaaatgcctatcgtttactgaaa
gcgatgaaaattacgggcaaggtgaatatggcaattacagtgctaagaggttccagcgaa
aagaaggcattggaatttcaaaaagataaggaaatctatggagtgggaaaaatttggtca
aaagagtattggagacatttggttgaacaattgaaggataatgagtacatcactatcaaa
aaactaccactgccatatcggccgatacaagttgtctcacagctgggtttggcctggtta
aacaaaacaaacagagaccgcttgatccttgtggccaaacccgaaatgtatcaatacttt
agaaaaaagaagcaacaagcttttgaaaataataatttgaaaccaagtacgagtacaaag
ccagcaactgaagttcggcaaggtattcaaagtctaatggaaacaaaagacattgatgac
tatcaaatggaaatggaaatgagcgataaacatttggaggaaattctactcggaattcga
gctattttggctgaaaacagtgattgtatgccgtatttggtggcgtcaaacattgccatc
caacaaatggtcgaaaagaaaccagttagtgtcaaggaattcaagtcatatgtcatcgat
gggttttctattgcgaaaatagataaatttgcatcgttcttcattgatggaattattaaa
ttcatgaataatgaattttgtttaagtaaacttttgaagacctatccattgaaaacaaaa
caatctcaattgtcaccgcaagaaacacgacacttacataaactcatccggaataatcat
gcgctcaccgatatttgcaagcaaataaatcgcactgagcccgaattaattgatgaaatt
gtaattttgattcgaactggtttccaagttacaaaaggccatttggcccccttgattgga
gcaagcgatgaaattctacgatatctcaaagacaatgtgaccaatgaagactttttgaat
ttggataatgttagtgaggtcaaagcaaaattttccacaaacccacacatcaccgaacca
atgctgatgctggttttaaattacttaaaagttcgacaatttttacaatcgatttctgtt
ccatattttgatgtggatgaaaatcgtcttgttaacggtcatactctcttggggtcgaaa
acaattgcggcaagtcaaagccaacaaaattcacaaaacgaaacattatcaaatgcgagt
ggaagtggacacacaccaagcgatttggatttatcaaatcaacatgaccaatcatcaatg
gttttggatttgttggaagaagacgaagacgattttgcggctgctattgcaagtttcgat
agtgcgactgaaattatggcagccaaaccattacatgcgtcacagaaagtgaatcaacat
caagaaataaagaaatttgaagcaaaacaaccaacaaaaatgccttcagctcacagcaaa
ataccagaaactaaaacagaaacaacaaccactacagctagtaccaaacgaccaaaagca
acattgaaaaaacgtccggcagcaacgtatgcaattcaatatttgagcgactccgattca
gatgagccaaaagccgatgaacaagaaccacagaagaaacgagtgatgccacagtggctc
acctcaaagcgaagcacaaccacaaattcaaaaccgaatccagttcagaaaaaatcatcg
ttcttcggatga
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