Contarinia nasturtii (swede midge): 116342189
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Entry
116342189 CDS
T08003
Name
(RefSeq) probable cyclin-dependent serine/threonine-protein kinase DDB_G0292550
KO
K24526
RNA-binding protein 12
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cns03041
]
116342189
Spliceosome [BR:
cns03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116342189
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RNA_bind
YjcQ
Motif
Other DBs
NCBI-GeneID:
116342189
NCBI-ProteinID:
XP_031625559
LinkDB
All DBs
Position
Unknown
AA seq
1022 aa
AA seq
DB search
MSVIIRLQNLPWSANATDIRQFFKGLGIPDGGVHIVGGENGDAFIAFATDDDARKAMRLD
GSKLKEIQVRLFLSSRAEMQEVIESARQTTISLMQMQQPAIARPIVATVPPPVLTPQSPP
QASLATAIQQKMPPTLPTQLPGLITQQMYQQQMQQLQQQNPVGALNGLPTKTSDTLDLVS
SRRSRRSRSRSRSHSYSRSRSRSRSPSRSHDRYRRRSRSPRRNKGRSHRDRSDSRDRDRR
RNNRPNARNDMGRNGNDKRSSVEMEPNPSIVPNQMNAMNSLYQQNVPFNSNISQYMMKQM
NNPNAGIVNPLAGQSEQISAFSTNDVRTMNMNMSLQTNPLAFQQHLYGQQQPVNMPAFNT
FSQTAGVLQNAQQQQHPHQHPHHQQMTGPGMSGQLNKFGMNNGMGGGGPYCVRVRNLCNL
TNYSAIRKFFAGLLIPNDGIKMINDTDGNRTGQAYVRFARPNFVQLAIQRSNQKLGRNII
KIEELDEKTYEEALDAYRPPRRNNYRDHDRDRDRRYRRNSRDSRDYSDDDDDDDRNSSKG
NSDNDRDNDVMCISDSNDSKESAPFTTVLIEDLPPFTKEQDIMKLFSSYPLVHIVMAKRP
KMFSSYVKFHSADHAKAAVKNTACHKISFKTVYISACSEEEFQTARKEFSGELDLDIGMP
KANVEDNSSSSNDKNDRNEIKSPDTSIQNDEYMNDESNEVSDHSIAGVSLENIPGVNLND
PRINPAKFPFLKNMSQMDTKHSNERIDPRTKSSVQAPISNAFNVFGMDGSMAAQQQSMMD
MNISMTEVCCVLIENMEYRTTEMEIVEWSQVKANLTPIRIQLLVNERNQTNGSGFIQFAN
SEQATKAMELLDKAQFKSRVVHVSLASWQQIMMTIQNITQILRENGFDGIDTSGNIPRPP
RYNNNNNNPNNRFQNNNRFNNNGHNNRMPNNRPNRNGANMNGCVVSMSNVPYKASVEDIL
DFFSDFDLSAEDVIRRYNDEGKPTGDARVRFDSPSEARRAIDLRDKCRLTNRPVYLQLFN
QH
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcataatacgactgcaaaatttaccatggtcggcaaatgccaccgatattcgt
caattcttcaaaggcttaggaataccggacggcggtgttcatattgttggcggtgaaaat
ggtgatgcattcattgcttttgcaactgatgatgatgcaagaaaagcgatgcgtttagat
ggaagtaagttaaaagaaatccaagttcgattgtttttatcgtcacgggctgagatgcag
gaagtcattgaaagtgcacgtcaaacaacaatctcattgatgcaaatgcaacaaccggct
attgctcgacccatagttgcaactgtaccgccaccagtacttacaccacaatcaccacca
caagcaagtcttgccacagctattcaacaaaaaatgccacctacactaccaacccaatta
ccgggcctaataacacaacaaatgtatcagcaacaaatgcaacaattacaacaacagaac
ccagtgggtgcactaaatggtttgccaacaaaaacgagtgatacactcgatttagtaagt
agccgacgtagccgtagatctcgctcacgttctcgttcccactcttattcgagatcgcgc
agtcgttcgcgttcaccctcacggtcacatgatcgatacagacgtcgctcacgttcaccg
cgtcgaaataagggtcgttctcatcgtgatagaagcgatagccgtgatagagaccgtcgt
cgaaataatcgaccaaatgctcgcaatgacatgggccgtaatggaaatgataagcgttca
agtgttgaaatggaaccaaacccatcaattgtcccaaatcaaatgaatgctatgaattct
ctctatcagcaaaatgtaccgtttaatagtaatatctcacagtatatgatgaagcaaatg
aataatccaaatgcgggcatagtaaatccattggccggtcaaagtgaacaaattagcgca
ttttcaacaaatgatgtgcgtaccatgaatatgaacatgtctttacaaacaaatccgtta
gcttttcagcaacatttgtacggtcaacagcaaccggttaatatgccggcatttaataca
ttctcacaaacggcgggtgttttacaaaatgctcaacaacaacagcatccgcatcaacat
ccccatcaccagcaaatgacaggacctggaatgtctggtcaactgaataaatttggcatg
aacaatggcatgggtggtggtggtccgtattgtgttcgcgtacgaaatttatgtaattta
accaattacagtgcaattcgtaaattctttgctggtttattaattccaaatgatggcatt
aaaatgataaatgatacagatggtaatcgaactggtcaagcgtatgtacgttttgcccgt
ccaaattttgtccaattggcaattcaacgaagtaatcaaaaattgggccgaaatattata
aaaattgaagagctcgatgaaaaaacatatgaagaagcgctcgatgcatatcgaccacca
cgtcgtaataattatcgtgatcacgatagagaccgtgatcgtcgatacagacgaaatagc
cgcgatagccgggattatagcgacgatgacgacgacgatgatcgtaatagcagcaaagga
aattcggataacgatcgtgataatgacgttatgtgcatatcagattcaaatgatagcaaa
gaatcagcaccatttacaaccgttttaattgaagatttaccaccatttaccaaagaacaa
gatatcatgaaattgttctcatcatatccgcttgttcacattgttatggcaaaacgaccg
aaaatgttttcatcatatgtgaaatttcatagtgctgaccatgccaaagcggctgttaaa
aatacggcatgtcataaaataagttttaaaacagtctacatttcggcgtgtagtgaagaa
gaatttcaaacggctcgcaaagaatttagcggcgaattagacttggatattggaatgcca
aaagcgaatgttgaagataattcaagctcatcgaatgataaaaatgataggaatgaaata
aaaagtcccgatacatccatacaaaatgatgaatacatgaacgatgaatcgaacgaagtg
tccgaccattcaatagccggtgtttcattggaaaatattccgggcgttaatttgaatgat
ccacgcatcaatccggccaaatttccatttttaaagaatatgagtcaaatggatacgaaa
cattccaacgaacgcattgatccgagaaccaagtcatcggttcaagcgcccatatcaaat
gcattcaatgtctttggcatggacggttcaatggccgcacaacaacaatccatgatggat
atgaacataagcatgaccgaagtatgttgtgttttaatcgaaaatatggaatatcgtaca
actgaaatggaaattgtggaatggtcgcaggtcaaagccaatctaacgccaattcgaatt
caattgttggtgaatgaacgtaaccaaacaaatggcagtggattcatacaatttgcaaac
agtgaacaagcaacaaaagcaatggaattactcgataaagcccaatttaaatcacgtgtc
gtacatgtttcgcttgcatcatggcaacaaattatgatgaccatacaaaatattacacaa
attttacgcgaaaatggttttgatggcattgatacatcgggaaatataccacgtccaccg
cgttacaataataataataataatccaaataatcgattccaaaacaataatcgattcaat
aataatggacacaataatcgcatgcccaacaatcgaccaaaccgtaatggtgccaatatg
aatggatgcgttgtgtccatgtcgaatgttccgtataaagcatccgtggaagatatactg
gattttttcagtgactttgatttatccgccgaagatgtcatacggagatacaacgatgaa
ggcaaaccaactggcgatgctcgtgtacgatttgactcaccgtccgaagcgagacgcgcc
attgacttacgcgacaaatgtcgactcacaaatcgacccgtttacttgcaactgtttaat
caacattaa
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