Contarinia nasturtii (swede midge): 116342222
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Entry
116342222 CDS
T08003
Name
(RefSeq) protein SDA1 homolog
KO
K14856
protein SDA1
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cns03009
]
116342222
Ribosome biogenesis [BR:
cns03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
116342222
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_C
SDA1_dom
LMWPc
Motif
Other DBs
NCBI-GeneID:
116342222
NCBI-ProteinID:
XP_031625610
LinkDB
All DBs
Position
Unknown
AA seq
749 aa
AA seq
DB search
MVRHNNQLPDNLPQLQNLIKRDPTSYREEFMQQYNHYLSLLEVFRLNPGQENKSLDELVM
FIAQVAQCYVEELITFPQQLVDLLKTQSTTLDQNMRNSFCRALILLRNKNLIPALDLLEL
FFQLLRCPDKSLRSFLENHIITDIKNMNAKHKDMKLNSTLQNFMYTMLKDSNPKAAKMSI
DIMIELYKKNIWNDTKTVNVIANVGCFSKITKVMVASLKFFLGSDPDEKNSDDSDSDNEP
DLKGAILANRVNKKTKKRQKQLANIKKQVTKVKKKKTAVASFNFSAVHLIHNPQGMAENL
FKQLQSQNERFEVKLMHLDVISRLIGIHELFLFSFYPYVTRFLQPHQRQVTRVLQFAAQA
SHELVPGDVIEPILKTIANNFITERNSTDVMAIGLNAVRAICSRCPLAMGEDLLRDLVLY
KAYKEKSVMMAARSLITLYREQIPALLHKKDRGRTSEAQAEMKPKQYGAVAAFDNIPGAE
ALLKSAKSVSVKDDDDSDSDSWVDVNESGDEININTDSDSNSDDESGDNEEAGSDVEDEE
VDDEADESGEEESDVEDEVEDEESDAESETEANHASEKPTKKSPKVQKKSKATSNGTAVE
NGSTEKSVKVLDEKQAAQEIALTRIFTDEDFKRIDAQIIKKHVSNARKRPLESEQTEYVK
LDDIEMIYKKRRTDKASRLETVMRGREDREKYGYRDKRKNIHCSKTNNEKKKKKNFGMMR
VKARSKVKKSFKEKQQSMRKHLLKQKKMK
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggtccggcacaacaatcaactaccggataatttgccacagttgcaaaatttgataaaa
cgagatccaacttcgtacagagaagagtttatgcaacaatacaatcactatttgagttta
ttggaggtatttcgcctgaatccaggacaggagaataaaagtttagatgaattggtgatg
tttatcgctcaggtggcacaatgctacgtcgaagaattgatcacatttccccagcaactg
gtcgatttgctgaaaacccaatcgacaactctcgaccaaaacatgcgaaacagtttttgt
cgtgcattgattttgctacgtaacaaaaatttgatcccagccttggatttgcttgagtta
ttctttcaattgttgcgatgtcccgataaatcgttgcgttcatttttagaaaatcacatt
atcactgacatcaaaaacatgaacgccaaacacaaagacatgaaactgaattccacacta
cagaatttcatgtacacaatgttgaaagattcaaatccaaaagcggccaaaatgtccatt
gacatcatgattgaattgtacaaaaagaacatttggaacgatacaaaaacggtgaatgtt
atcgcaaatgttggatgcttttcaaagataacaaaagtcatggttgcttcgttgaaattc
tttttgggcagtgatccggatgaaaagaattccgacgattcggacagtgacaatgagccg
gatttgaaaggtgccatactggcgaatcgtgtcaataaaaagacaaaaaagcgtcaaaag
caattggctaatatcaagaagcaagtgacaaaagtaaagaagaagaaaacagcagtggca
tcgtttaatttttctgccgtacatttgattcacaatccacaagggatggccgagaatttg
tttaaacaattgcaaagtcaaaacgaacgcttcgaagtgaaattgatgcatttggatgtg
atatcacgattgattggtattcatgagctctttttattctcattttatccatatgtaaca
cgttttttgcaaccacatcaacgtcaagtcacacgtgttttacagtttgccgcacaagca
tcacatgaactggtgcccggcgacgtgattgaaccgattttaaaaacaattgccaataat
ttcatcaccgaacgaaattccaccgatgtcatggccattggtttgaatgccgtacgagcg
atttgtagtcgttgcccgttggcaatgggcgaagatttattacgagatttggtgttgtac
aaagcatacaaagaaaagagtgtaatgatggccgctcgatcactgattacactttatcgt
gaacaaattccagcattgcttcacaaaaaagatcgtggacgtacatcagaagcacaggcc
gaaatgaaaccgaaacagtatggagccgtagccgcttttgataatatacctggtgctgaa
gcactgttgaagtcggccaaatcggtatcggttaaagatgatgacgactcagattcggat
agttgggtcgatgtcaacgaaagtggtgatgagataaacataaacaccgacagcgacagc
aacagcgatgatgagtccggtgataatgaagaagcgggcagtgatgtagaagacgaagaa
gtcgacgatgaagcagacgaaagcggcgaggaagaaagcgacgtagaagatgaagttgaa
gacgaagagagtgatgccgagtctgaaactgaagcaaatcatgccagtgaaaagccaaca
aaaaaatcgccgaaggtccagaagaaatcaaaggccacttcaaatggaacggctgttgaa
aatggatccacagaaaaatcggtaaaagtactagacgaaaaacaagccgcccaagaaata
gcattgactcgcattttcacggacgaagacttcaaacgtatcgatgcacaaattatcaaa
aagcacgtgtcaaatgcacgcaaacggccgcttgaatcagaacaaacggaatatgtcaaa
ttggatgacattgaaatgatttataagaaacgacgaacggacaaggcatcgcgtctggaa
acggtgatgcgaggtcgtgaggatcgtgagaaatatggttacagagacaaacgaaagaat
attcattgttcaaagacaaacaatgaaaagaaaaagaagaaaaactttggtatgatgcgc
gtaaaggcacgatcaaaggtcaaaaaatcgttcaaggaaaaacaacaatccatgcgaaaa
catctactcaagcaaaagaaaatgaaataa
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