Contarinia nasturtii (swede midge): 116342300
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Entry
116342300 CDS
T08003
Name
(RefSeq) ATP-dependent DNA helicase Q-like 3
KO
K10902
ATP-dependent DNA helicase Q5 [EC:
5.6.2.4
]
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cns03400
]
116342300
Enzymes [BR:
cns01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
116342300
DNA repair and recombination proteins [BR:
cns03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
116342300
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Motif
Other DBs
NCBI-GeneID:
116342300
NCBI-ProteinID:
XP_031625684
LinkDB
All DBs
Position
Unknown
AA seq
1300 aa
AA seq
DB search
MDEPLKSSAKSKSSSSSSSKQKKDEKTSKEDIYTSDFLRKKLKVYFNHSDFKSSLQKDAI
REIMRGKRDVYISMPTGSGKSLCYQLPGMLHENKITIVFSPLIALIKDQMDHLTKIKISA
ESLNSKMTTRERDRVINDLKSIRPSTKFLYITPEQAATDFFRSLLDSIVKYNKLALVAVD
ECHCVSEMGHQFRRDYLKLGELRKRYPTIKWIALTATASKEVTSDIFKQLALKDTKSFKT
PCFRKNLFYDIIYKNSIQDDYIHLKEFVTKCLKTKNPDDKPNKAPCGIIYCRTRESVERV
ANGLTKQNIVSKPYHAGINDKDRKQYQEDWTDGKFPVICATNSFGMGVDKATVRFVVHWD
VPQNIAAYYQESGRAGRDGLPSFCRLYYCRQEVKTINFLLQQQLQKDPDNVKSKRSVKEF
ERLVDNCESLRCRHLLFSHYFGDHPPDCKQKQLCDVCKDYKGSEKKLENFHRLALNGFTS
KMDVDFDSSDLYEGGRNAVQESETAYTQVNDDDHEEYGATKRDAKAKRETTNLIQKEFER
RKQKIEAAKKLEQTQTRSFGIRIRSSIHTSKIAGLDVKKREIYLDFLLKVLKENAEKASE
KPPHPLKGCDFEDIAAELEYNCFTKNRVFAMYQKSITVERLRIDRSTKNNELLTEIKNHT
PKKRTAYGGSSEAMQRDLDDFMEKNKIVDETNNTANHANVGFQTARQINNKLRETNRMKK
DPLTQMSINSFFSTASIKREPEEDNVDDNQNGLENSQPAKRRKVDIEAPRIKTEPMDTNE
STENMTSVPIKNEPINYDSDCGTEKGSDDEMDTMTHTSKQQQQQPAAPPPNRITTNAKNI
EFNPQNVKTERNYDGADTDEASDNDGETVTGVNQVQRKKTKSQRDNEQQARDQRIGTHRS
NQCETITSQPRQLVQNEIISEIGLNCEEESMAMVVAEPVRVNDDIKDEPVESDEETDDES
NVNNQNVEPQSVSANFHDDDRYQQPSTSTAYPQHFTALPPPPIHQEPIYDQPLYNVGLKS
TKSVVNAVDGNPLLRFNQFERPAEREKPMKNYVEIVDDDDINYDELGDEIEKYVEDMEQA
HNEELEQLKKINMAQLNIKERAALAERLKKLLRKKELIYKEKVKEEAKKTEKEQEKIRSN
FMSDLFGSNFKLDILEKRMLHKTFVTDRGAREQKVISYSDFMMKPIKCEDEKTKKEYHVS
MALNEHIHKMNEANMLDLVPQKVIDKVRNDKMTIKNKVERYLMPFYNDRRINKKEYENIC
QTITHYQYESNEYSSAAIRDQVLRVVTDWIKNRESMRKAK
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atggacgagccattaaaatctagcgccaaatcaaaatcatcttcatcgagttcttcgaaa
caaaaaaaggatgaaaaaacatcaaaagaagatatatacacgtcagattttctgcgtaaa
aaattgaaagtttactttaatcattcggacttcaaaagtagtctacaaaaagatgccatc
agagagattatgagaggaaaacgtgacgtttatatttcgatgcccactggaagtggcaaa
agtttatgctatcagctacctggtatgctgcacgagaacaaaatcacaattgtcttttcg
ccgttaattgcattgataaaagatcaaatggatcacttgacaaagataaaaatatctgcg
gaatctttgaactcgaaaatgactacaagagaacgcgatcgggtaataaatgacctgaaa
agtatacgcccgagcacaaaattcctatacattacaccagaacaagcagccaccgatttc
tttcgctcgctactcgattctattgtgaaatacaataaattggcgttagtagccgtcgat
gaatgccattgcgtgtcggaaatgggtcatcaatttcgacgggattacttgaaattggga
gagctacgtaaacgatatccaactataaaatggatagcacttacagcaacagcatcgaag
gaagttacatcggatatattcaaacaacttgcactaaaagatacaaaatcattcaaaaca
ccatgttttcgtaaaaatttattctacgacattatttataaaaattccattcaagatgat
tacatccacttgaaagaatttgtaacgaaatgtttgaagactaaaaatcccgatgataaa
ccgaacaaagcaccgtgcggtataatttattgtcgaacgagagagtcggtggagcgtgtt
gctaatggtttgacaaagcaaaatatcgtctccaaaccctatcatgctggaattaatgac
aaagatcgaaaacaataccaagaagattggaccgatggtaaatttccagtaatttgtgct
accaactcttttggcatgggcgtagacaaggcgactgttcgatttgttgtgcattgggat
gtgccacagaacatagccgcatattatcaagaatcgggccgcgctggaagggatggcctt
ccatcattttgtcgtctttactattgtcgtcaagaggtgaaaacaatcaattttcttttg
caacaacaacttcaaaaagatcccgacaacgtcaagtccaagcgaagcgtgaaagagttt
gaaagattggtcgataattgtgaatctttgcgttgccgtcatttgctcttttcccattat
ttcggtgatcatccgcccgattgcaaacagaagcaattgtgtgatgtgtgtaaagattac
aaaggtagcgaaaaaaagttggaaaattttcatcgacttgctctgaatgggttcaccagt
aaaatggatgtggatttcgatagttccgatttgtatgaaggtggccgaaatgcggtacag
gaatcagaaactgcctatacccaagtcaatgacgatgatcacgaggaatacggtgcaacg
aaacgtgatgcaaaagccaaacgagaaacaaccaatttgatacaaaaagaattcgaacga
cgcaagcagaaaattgaggcagccaaaaaattggaacaaacacaaacacgatcgtttggc
attcgaattagaagcagtattcacaccagtaagatagctgggttggatgtaaagaaacgc
gaaatttacttggacttcttgctgaaagtgttgaaagaaaatgcagaaaaggcgagcgag
aaaccaccacatccattgaaaggttgtgattttgaagatattgctgctgaattggagtac
aactgtttcacaaaaaatcgtgtgtttgcaatgtaccaaaaatcaatcacagtggagcgt
ctacgaatcgatcgaagcaccaaaaataatgaattattgaccgaaattaagaatcacaca
ccgaaaaagcgaacagcatatggcggatcatctgaagctatgcaacgggatttggacgat
tttatggaaaagaataaaattgtggacgaaacaaataacacagcgaatcacgcaaacgtg
ggatttcagactgcgcgtcaaattaacaataaattgagagagacaaatcgcatgaagaag
gatccattgacacaaatgtcgatcaattcatttttttcaacggcgtcgataaaacgcgaa
cctgaagaagacaatgttgacgacaatcaaaatggattggaaaatagtcaaccagcaaag
cgacgcaaagtggacatcgaagcacctcgaattaaaactgaaccgatggatacgaatgaa
agcaccgaaaatatgacatccgtaccaataaaaaacgaaccgattaattatgacagtgat
tgtggcacagaaaagggcagcgatgatgaaatggataccatgacacatacatcaaaacaa
caacaacaacagccagcagcaccgccaccaaacagaataacaacaaatgcaaaaaacata
gaattcaatccacaaaatgtcaaaacggaacgaaattatgatggtgccgacacagacgaa
gccagtgataatgacggtgaaacagtgaccggtgtgaaccaggttcaacgaaaaaaaacc
aaatcacagcgcgacaatgaacagcaggcaagagaccagcgaattggaacacatagatca
aatcaatgtgaaacgattaccagtcaaccgagacaacttgtacaaaatgaaatcatttcg
gaaatcggattaaattgcgaagaggaatcaatggcaatggttgttgctgagccagtgaga
gttaacgatgacattaaagatgaaccggttgaatccgatgaagaaacagacgatgaaagt
aatgttaacaatcaaaatgtcgagcctcaaagcgttagtgccaatttccacgatgatgat
cgatatcaacaaccatcaacatcaacagcgtatcctcaacatttcacagctctaccgccg
ccgccaattcatcaagagccaatttacgatcaaccactgtacaatgttggactaaagtca
accaaatcagttgtgaatgccgttgatggtaacccattattgcgattcaatcaattcgaa
cggccagcggaaagagaaaaaccaatgaaaaattatgtggaaatcgtcgacgacgacgat
atcaactacgatgaattgggcgatgaaattgaaaagtatgtagaagatatggaacaggcg
cacaatgaagagctggaacaattgaagaaaatcaatatggcacagctaaatataaaggaa
cgagcagcattggccgaacgcttaaaaaaactactaaggaagaaagagctcatctataaa
gaaaaggttaaagaagaggctaaaaaaaccgaaaaagaacaagaaaaaattcgtagcaac
ttcatgagcgatctcttcggatcgaatttcaaacttgatattttggaaaagcgaatgctg
cataaaacgttcgtcacggatcgtggtgcacgtgaacaaaaagtcatttcgtacagtgat
ttcatgatgaagccaatcaagtgcgaagatgaaaaaaccaagaaagaatatcacgttagc
atggccttgaacgagcacattcacaaaatgaatgaggcaaatatgcttgatttggtgcca
caaaaagtgatcgacaaggttcgcaacgataagatgacaatcaaaaacaaagtcgaacga
tatttaatgccattctacaacgatagacgcatcaacaaaaaggaatatgaaaatatttgc
caaacaattactcattaccaatacgaaagcaacgaatacagttctgcagccattagagat
caagtgctgagagttgttacagactggattaaaaacagagaaagtatgcggaaggccaaa
tga
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integrated database retrieval system
