Contarinia nasturtii (swede midge): 116342351
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Entry
116342351 CDS
T08003
Name
(RefSeq) vesicle-trafficking protein SEC22b-B
KO
K08517
vesicle transport protein SEC22
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04130
SNARE interactions in vesicular transport
cns04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
116342351
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116342351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cns04131
]
116342351
Membrane trafficking [BR:
cns04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
116342351
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Sec20
DUF7515
LUC7
Motif
Other DBs
NCBI-GeneID:
116342351
NCBI-ProteinID:
XP_031625776
LinkDB
All DBs
Position
Unknown
AA seq
211 aa
AA seq
DB search
MALMTMIARVIDGLPLVGTMTEDEQSGKSVLEYQNQAKMLFRKLGPQSPQRCSIETGPYL
FHYLIENDVCYLVMCDKMHSKRSAFAYLEDLSQEFHKNYGRKVNTVTRPYAFIEFDVYIQ
KTKKNLTDRRKNINTINSQLQDVQRIMVQNIDDVLQRGTVLSELDSKTQNLSMLSQKYKK
DATYLNRKSMYVKAAAAGIIFLVFIFYFWIL
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggcactaatgactatgattgctcgtgtcatcgatggtttaccattggttggaaccatg
actgaggacgaacagtcagggaagagtgtgttggagtatcaaaatcaagctaaaatgcta
ttccgaaagttgggccctcaatcgccgcagagatgttcaattgaaacaggaccataccta
ttccattatttgattgaaaatgatgtatgctatttggtgatgtgcgacaaaatgcattca
aaacgctccgcattcgcatatttggaggatttgtcacaagagttccacaagaactatggc
cgaaaagtgaatacagtgacacggccttatgcattcattgaattcgatgtttacatacaa
aaaacgaagaaaaatctaaccgatcgacgaaaaaacattaacacaataaatagccaacta
caagatgtacaacgaattatggtccaaaatattgatgacgtactacaaagaggaactgtc
ttatccgagctcgattcaaaaacacaaaatttgtccatgctatcgcaaaaatacaagaaa
gatgcgacgtatttaaatcgaaaatcgatgtacgtgaaagcagcagcagctggaatcata
tttttagtgtttattttctatttttggattctataa
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