Contarinia nasturtii (swede midge): 116342360
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Entry
116342360 CDS
T08003
Name
(RefSeq) trafficking protein particle complex subunit 10
KO
K20307
trafficking protein particle complex subunit 10
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cns04131
]
116342360
Membrane trafficking [BR:
cns04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
116342360
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAPPC10_1st
Ig_TRAPPC10
TRAPPC10
Foie-gras_1
MIER1_3_C
Motif
Other DBs
NCBI-GeneID:
116342360
NCBI-ProteinID:
XP_031625790
LinkDB
All DBs
Position
Unknown
AA seq
1147 aa
AA seq
DB search
MEFKPIVTYSGAGPLFRSLEAHIVASIPLDTCEWKRSYGRPVKDIQLEASFHPLNVKLLD
KYKSGEWSIIEHPILHLYVTECNDIDTYKSNVKEDIDSWLKMLNTYGITDWMILVVETFD
IKKTKNILPRTTVLDKIRTDFASKNGDRCISILNPMKYEMKATESYRCFLQRIRHLMLCG
YNRTINKYEELIRANRETRNQEGWCFIKYFLLQEELAFVLQMLGLHSEALIQYDELDAMF
SQFILNSMYGEKPKWLEVFQRPFSSFHGIKMNNSQLKEVRRKIEEKSITLLEFRSYLFER
QAVILKAAEKTSEIAERLLPFLFSTLRELDALKIEMIDGALACWEFISALEVLDACEMAI
ESNNTTNIFKYTAPIWNLAKDKLYELGKLCGLLPGFTPTSEQLHIVVQLSAGMGDNFEET
DRAVLDNKASEALLEQQRSMSPGRKPKKSATERLREALGSNQAFEKLYLEFSELAISTYK
HVSRLRSARLVGLDLGNFYCNLSEPNKAVTFFTDLMRELKAENWNNLASQTLLELANCYR
KMDDMTAYTKICAAIACSKQLETLVRRHYFDEFVKSINSVRIKLDIIDIESHQNDCITAL
EDHFEIQDIRVTQNGPIIQDDIITVKLKVVSNFPKDILVNNISVSFESNSKQSENILDDF
ISSSKMPVSSFLDYKQDTTINCASVVCELKSKQPVRRSSSTRGKSTLTVRNDFTNQVQAE
NVKLKPGENTIELNAKATRVGLWNFKQVSICIEKLDFVSGALPFKCDRFEIQTKAASAVL
SFKNLVAGIEQHVDLIVSSGSFIFPKEATITLKCSKYLKIRETASEDESMLTDQCKDFKS
ETTIRLYDVKPFQERKIPLSVICDLLGQRDEKLIEQKITLQCPWSRNEVNIPLSFMPAMV
ASCRLHSSGTRKFLQVMIKGVESQLELTNISMTCDSNGVTLHDNNPKSVKSYQCQKNLIV
SLLWEIEVEPLQAECQLKLIKVNFSLDYAQLNDNGETSKLKKRYHCKFDVTDYATLFRIE
ARLEPGELCRVGSVYNLNLKIIKVHSSPYVDLMYEVVPDQNLWAVVGRTAGVISMAERDA
QSVMVEVLPLSAGFLPLPNIRLSKYISAEKNEIHPKLQPFPPGQIYNATKSLQIHVLATA
NNGNSNE
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atggaatttaagccaattgttacgtattcgggcgctgggccacttttccgttcattggaa
gcgcatattgtggcttcaataccattggatacgtgtgaatggaaacgttcgtatggtcgt
ccagtgaaagatatccaattggaagcatcatttcatccgctcaacgtgaaattgttggat
aaatataagtcgggcgaatggagcattattgagcatcccattttgcatttgtacgtaact
gaatgcaatgacatcgatacatataaaagtaatgttaaagaggacattgacagttggctg
aaaatgctcaacacatacggaattaccgattggatgatacttgttgtggaaacattcgat
ataaagaaaacgaaaaatattttgccccgaacaacggtgctcgacaaaattcgtaccgat
ttcgcatcgaagaatggcgatcgatgcatctctatattgaatccaatgaaatatgaaatg
aaagcaaccgaatcctatcgctgttttttgcaacgcatacgacatttaatgctgtgcggt
tataatcgtacgataaacaaatatgaagaattgattcgtgccaatcgcgagacacgcaat
caagagggatggtgtttcattaagtattttttgctacaagaagaattggcattcgtgcta
caaatgttgggcttacattcggaggcgttaattcaatacgacgaattggatgcaatgttc
tcgcagttcatattgaattcaatgtatggcgaaaaaccaaaatggttggaagttttccaa
cgaccattcagttcattccatggcattaaaatgaataattcgcaattgaaagaagtgcga
cgtaaaattgaagagaaatcaataacattgctggaatttcgaagttatttatttgaacga
caagcagtaattcttaaagcggccgaaaaaacatccgaaattgccgaacgattgttgcca
tttctattttcaacacttcgtgaacttgacgcacttaaaatagaaatgattgatggtgct
ttggcatgttgggaatttatttctgcactcgaagtgttggatgcttgtgaaatggccatc
gaatcaaataacacgaccaacattttcaagtataccgcaccaatatggaatttggccaag
gataaattatatgaattgggtaaattgtgtggattattgccaggctttacacccacttcg
gagcaattgcatattgttgttcagctatcggctggaatgggtgataattttgaagaaacc
gaccgagctgttcttgataataaagccagtgaagcacttttggagcaacagcgatctatg
tcgccaggccgtaaacccaaaaaatcggccaccgaacgtctccgagaggcgctcggttca
aatcaagcattcgaaaaattgtatttggaatttagtgaattagctatcagcacatacaaa
catgtttcaagacttcgttcggctcgtttggttggcttggatttgggtaacttctattgc
aatctctctgagcccaacaaagcagtcacattttttactgatttgatgcgtgagttaaag
gccgaaaattggaacaatttggccagtcaaacattgttagagttggcaaattgttatcga
aaaatggacgatatgactgcatatacgaagatttgcgctgcaattgcttgtagcaagcaa
ctagagactctggttcgacgtcattatttcgatgaatttgtcaagtcaattaattcggtg
cgaatcaaattggatattatcgatattgaaagtcaccaaaacgattgcatcacagcatta
gaagatcatttcgaaatacaagacattcgagtaacacaaaatggaccaattattcaggac
gatattataacagtaaaactaaaggtggtcagtaactttccgaaagatattctagtaaat
aacatttctgtttcatttgagtcaaactcaaaacagagtgaaaacatccttgatgatttt
ataagcagttcaaaaatgccagtttcatcttttcttgattacaaacaagatacaacaatt
aattgtgcatcggttgtgtgtgaactgaagagcaaacaaccagttcgaagatcgagcagt
acacgtggaaaatccacactgacagttcgaaacgatttcacgaatcaagttcaagccgaa
aatgtcaaattgaaacccggcgaaaatacaattgaattgaatgccaaagcaactcgggtt
ggattatggaatttcaaacaggtatcaatctgcattgaaaaattggattttgtgtcgggt
gcgttgccattcaaatgcgatcgattcgaaatccaaacgaaagcagcatcggctgtgttg
agcttcaaaaatttagttgctggcatcgagcagcacgttgatttaattgtgtcaagcgga
agttttatatttccaaaagaggcaacaataacgttgaagtgttcaaaatacttgaaaata
cgagagactgctagtgaggatgagtcgatgttgaccgatcaatgcaaagatttcaaatcg
gaaacaacaatacggctgtatgatgtaaaacctttccaagagcgtaaaattccattatca
gtgatatgtgatttgcttggacaacgcgatgagaaattgatcgaacaaaaaattacatta
caatgtccatggtcacgaaatgaagtcaacataccattatcatttatgccggccatggtt
gcatcgtgtcgattacattcatctggtactcgaaagttcttgcaggttatgattaaagga
gttgaatctcaactagaacttacaaatatatcaatgacatgtgattcaaatggtgtcact
ttacacgacaacaatccaaaatcggtcaaatcgtatcaatgccaaaagaatttgattgtt
tcattattgtgggaaattgaagtggaaccattacaagccgaatgtcaattgaaacttatc
aaagtcaatttttctctcgattatgctcaattaaatgacaacggtgaaacatcgaaattg
aaaaaaagatatcactgcaaatttgatgtgaccgattatgcaacattgtttcgaattgaa
gcccgattagaaccaggtgaattgtgtcgtgtgggttccgtatataatttgaatttgaaa
attattaaagtccattcgagcccctacgttgacctgatgtatgaagttgttccggatcaa
aatctatgggcggttgtgggacggacggctggtgttatttccatggcagagcgtgatgca
caatctgtaatggttgaagttttaccgctttcagctggatttttacctctgccaaatata
agattgtcgaaatatatttcggctgaaaagaatgaaatccatccaaaactacagccattc
cctcccggtcaaatttacaatgcaacaaaaagccttcaaattcatgttttggccaccgca
aacaatggcaattcgaatgaataa
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