Contarinia nasturtii (swede midge): 116342431
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Entry
116342431 CDS
T08003
Name
(RefSeq) receptor-mediated endocytosis protein 6 homolog
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cns04131
]
116342431
Membrane trafficking [BR:
cns04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
116342431
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
Motif
Other DBs
NCBI-GeneID:
116342431
NCBI-ProteinID:
XP_031625899
LinkDB
All DBs
Position
Unknown
AA seq
1676 aa
AA seq
DB search
MQSIHNGNLLEIIDLAHSLRQEHLFIANEQASFNRLNETLGRNASNVAQLAWICSQQRQN
LNSLIISRPDTGPTECCHKANSLENTRFVEAHKAKGVKYEHVLAYNELLNFLHHSTYLLA
QSLSVGDRLEEISNDQMNSVVKTVATGLYGNAILSKDVDLVLRLLRDLIEIQVIVSENPR
RMLRSGSCSFSRLYSRLHESLFSAKLFLTAALHQPVMKVLIGDDLVLDIDANKAVQNYAA
KERLKKFGIEGTDEYAQKFNEFRRKTIEALFELTELFIKSLSNNWAMFPSTMRWVVQTMC
HLLRSVHVNDKEINDILTDMIFTNFICPAVVSPDLYGISDAPISENARMNLIQIGQILQM
FALMKHEDIDPKYVELFSMFDRNIISELMEQLLETENDIRVSSMAIPHQNDFGRGHVLVT
QNELNIFVDFLRTVLDNDELTISGEDRRKLNKILEQLPSTVLNGDQSTSNAVTITTESQS
KTKQLINLGKSTRNKLAKSISLNVGSDEYAASVSVNGSVGINNNVYHNVDNENVLMIPIT
ISEETKFQLLTEQEVLNMNNISNEIEPGLTEENVDTLDKTNNVAFDDELGAVMPTRKHTR
FSLSQDDQSIDNLEVVSEAPSNHSVTSSLELEENDQNLNDNLSDMVSANVSGRGTPNISG
RDTPSSQVTEGENVQIPTPQMAKILNKARSDIDDKFCKFEIKKLVEGDETISIISDTWST
DVLASDSETLEPVENERNFSTPLIPSAVVLPGDNNFNPLANPQLRANFLDASDTRSESAW
STDVLASDSEKMTEVDTDDNQSIAAKSDTTDANRSEGDPIPDLIPVNQRAPDSPFFSPRN
RAPDSPMFAPRAPDSPLFGTNRSSHFDDRRGTQSPRFPNEDYARFASTSSPSASNARNST
NKRYTDSAFRNYRSTPNGNESFERDPFLTTGTSTMRRQNSAESSISNQSSTLDDAAALNK
SKRSSTNKSNFSMNDFLRENGNSTEQEENVVKTSTDIINPFAEDELGAQGTSTTKLRHND
SSNHQSAQFSEETPVECRRMSNEQRALNASFDGRRNGISFSTANTSSNSITAASVQRFAK
SLNYENHEIIAKTKTSSLQLLSSSATDDDKNKRQDEYLLVQKTISMSLKDSAGQPPMESG
SSGDVFTGAEAPTSTDSANKTTAKYTGAIPKSISFDASADKNSNGRKVDGSPNTSPYHQP
HHSNGRQNGNGNGFFSKIKKGFRRNSKMPRATFEDYTAMPLSMESNGASASSSLFANTSQ
KSSIENGYNDSEDILEKYRRKISSSSEATNSDSIGHNLNNDRKSLMSTDEHHLAGMLHDE
NIYLYTKTKQKLRLVLSTTDLHTADFRHTNCNKTPPILVYLHIQLAQAQNLQNLQQISYV
SEAIRSVNQLDQSQQQTLIADLQSDLVKRQSYLQYLMRYHQNLLSALENIDRFEDRLKND
REMCNRHLIMVCVRMFLKKCESVIEQFEERFSELTVFDEKIDIMLDFMNRLMDDLKSDGV
LQGMADWQLHEARTCIERILLQRLYRQVLFPNDDADLSRDEVLHEHIRKLSTIITPSHSA
LRIPKAFWIESPWPFAQQQISYISAYKTPREKVQCVVRCITCIMNLLQMSSNRIPSADDL
VPVLIYVVIMANPPYLLSTIQYVNAFIGEEIEGEDQYWWTQFCSAVQFIKTMDYRD
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccatccacaatggcaatctgttggaaattatcgatttggcacactcgttgaga
caggaacatttattcattgccaatgaacaggcttcgttcaatcgcctcaacgaaacactt
ggtcggaatgcatcgaatgtggcgcagttggcctggatttgctcacaacaacgacaaaat
cttaacagtttgatcatatcgcgacccgacaccggtccaacggaatgttgtcacaaagca
aattcgttggaaaacacgcgatttgtcgaggcgcacaaagcaaaaggcgtcaaatacgaa
catgtccttgcctacaatgaattgctgaatttcctgcatcattcaacgtatttattagcg
caaagtttatcggtcggtgaccgattggaggagatttcaaatgatcaaatgaactcggtc
gtaaaaacggtggccaccggtctttatggcaacgcaattctgtcaaaggatgtcgatttg
gtgttgagactattacgtgacttgattgaaatacaagtgattgttagtgagaatccacgt
cgaatgttgcgcagtggatcatgttcattttcccgtctctacagtcgacttcatgagagt
ttattttcggcaaaattatttctaacagccgccttgcatcagccagttatgaaagtatta
atcggtgacgatttagtattggacatcgatgcaaacaaagccgttcagaactatgcggca
aaggaacgactgaaaaaatttggaatagaaggtaccgatgaatatgcgcaaaagttcaac
gaatttcgacgcaaaacaatcgaagcattattcgaactaacggaattgtttataaaatcg
ttgagtaacaattgggcaatgtttccgtcgaccatgcgttgggtcgtacaaacaatgtgt
catttgctcagatcggttcacgtaaacgataaggaaatcaacgacattttgactgatatg
atttttacgaatttcatttgcccggcggttgtaagcccagatttatatggcatatccgat
gcaccgatttccgaaaatgcacgcatgaatctcattcaaattgggcaaattttgcaaatg
tttgcactcatgaaacatgaagacatcgatccaaaatatgtggaattgtttagcatgttc
gatcgcaatattatctccgagttgatggaacaattacttgagactgagaatgatatacga
gtcagttcgatggcaataccgcatcaaaatgattttggccgtggtcatgtgctggtcaca
caaaatgagctcaacatttttgtggattttttgcgcaccgtattggacaatgatgagctg
acaattagtggtgaagatcgacgaaaattgaacaaaattcttgagcaactaccaagcacg
gttttaaatggtgaccaaagtaccagcaacgcagttacgattacaactgagagtcaaagt
aaaacaaagcagctaatcaatttgggtaaaagtacacgaaacaaattggcgaaatcgatt
agtttgaatgtgggcagcgatgaatatgcggctagtgttagtgtgaatggatcagttggt
atcaacaataatgtgtatcacaacgttgacaatgaaaatgtgcttatgattccgataacg
atcagtgaagaaacaaaatttcaattgttaaccgaacaagaagtactcaatatgaataat
atcagcaatgaaattgaacctggtctcaccgaagaaaatgttgatacacttgacaaaaca
aacaatgtggcattcgatgatgaattgggcgctgtgatgccaacacgaaaacatacacga
ttctcactttcgcaagacgatcaatcgattgataatttagaagtggttagtgaagcgccg
agcaaccattcggttaccagttcattggaattggaggaaaatgatcaaaatttaaacgat
aatttgtcggatatggtttcagcgaatgtttctggtcgtggtacgccaaacattagtggc
cgagatacgccatcgtcacaagtcactgaaggtgaaaatgttcaaattccgacaccacaa
atggccaaaattctgaataaagcacgatcggatatcgatgacaaattttgtaaatttgag
attaaaaaattggtcgaaggcgatgaaacgatttcgattatatcagatacatggtcaacg
gatgtattggcaagtgactcagaaacacttgaaccagttgaaaatgaacgaaacttttcc
acaccattgataccaagtgctgtggttctaccgggtgataataattttaatccattggcc
aatccacaactgcgagccaatttcctcgatgcgtccgacacacgatccgaatcggcgtgg
tcgaccgatgtgcttgcaagtgattcggaaaaaatgaccgaagttgatacggatgataat
caaagtattgcagcaaaatcagacacgaccgacgcaaatcggtccgaaggtgatcccata
cccgatttaattccggtaaatcaacgagcacccgattcgccattcttttcaccacgtaat
cgtgctccggattcaccaatgtttgcacctcgggcacccgattcaccgctttttggcaca
aatcgaagttcacattttgatgatcgacgtggcacccaatcaccccgatttccaaatgaa
gactatgcacgattcgcaagcacatcatcgccatcggcttcgaatgcacgaaactcgaca
aacaaacggtatacagacagtgcatttcgaaattatcgttcgacaccaaatggaaatgaa
agttttgaacgcgatccatttttaacgaccggtacttcaacgatgcgtcgtcaaaattcc
gctgaaagcagcatatccaatcaatcatccacgttagatgatgcggccgcactgaataaa
tcaaagcggtcatcgacaaacaaatcaaacttttcgatgaatgattttctacgtgaaaat
ggtaattcgactgaacaggaagagaatgtggtgaaaaccagtacggacatcataaatcca
tttgccgaagatgaattgggtgcacaaggtacgagcacaacgaaattgagacacaatgat
agcagcaaccatcaaagtgctcaattctctgaagaaacaccggttgaatgccgtcgaatg
tccaatgaacaacgtgcattgaacgcaagctttgatggtcgtcgcaatggcatctcattt
tcaacagccaatacaagcagcaattcaataaccgcagcttcagttcaacgttttgcaaag
agtttaaactatgaaaatcatgagattatcgcaaaaacaaaaacatcaagtttacaattg
ttgtcgagttcggccaccgatgacgataaaaataaacgacaagatgaatatttgctggtg
caaaaaacaatttcaatgtcactcaaagattcggctggtcaaccgccaatggaaagcggt
agcagtggcgatgtatttactggcgctgaagcgccgacgtctaccgattcagcgaataaa
acaacagccaagtatacgggtgctattccgaaaagtattagtttcgatgcatcggctgat
aaaaatagcaatggacgaaaggttgatggatcaccaaacacatcgccataccatcaaccc
catcattcgaatggtcgtcaaaatggcaacggaaacggtttctttagtaaaataaaaaaa
ggatttcgtcgtaacagtaaaatgccacgcgccacattcgaagactatacggccatgcca
ttgtcaatggaatcaaatggtgccagcgcaagtagctcattgttcgcaaatacttcacaa
aaatcatcaattgaaaatggatacaatgattccgaagatattttggagaaatatagacgt
aaaatctcatcatccagtgaagctaccaattcagattcgattggacacaatttgaacaat
gatcgaaagagtctcatgagcacagatgagcatcacttggctggaatgttacacgatgaa
aatatttatttgtatacaaaaaccaaacaaaagttacgtctcgttctatcgacaaccgat
ttacacacagccgatttccgacacacaaactgcaataaaacgccaccaatactcgtatat
ctgcacattcaattggctcaagcgcaaaatcttcaaaatctccagcaaatttcatacgtt
tccgaggcgatacggtcagtcaatcaattggatcaatcgcaacagcagaccttaattgcc
gatcttcagtcagatttggtgaagcgacaaagttatttgcaatatttaatgcgatatcat
caaaatttgctgtccgcactggaaaacattgatcgattcgaggatcgattaaagaatgac
cgtgaaatgtgcaatcgtcacttgattatggtttgtgttcgaatgtttttgaaaaagtgt
gaatcggttatcgaacaatttgaagaacgattttctgaattaaccgtattcgatgagaaa
atcgacataatgctggattttatgaaccgactgatggacgacttgaaatcagatggagta
ttgcaaggaatggccgattggcaactacatgaggcacgaacttgtatcgaacggatatta
ctgcaacgactctatcgacaagtgctgtttccaaacgatgatgctgacctttcacgtgat
gaagtattgcacgaacacattcgaaaattgtctacaatcattacgccatcacacagtgca
cttagaattccaaaggcattctggattgaatctccatggccatttgctcaacaacaaatc
tcgtacatttcagcatacaaaacgccacgcgaaaaagttcagtgtgttgttcggtgtata
acatgcataatgaatttactacaaatgtcttcaaaccgaatcccatcggctgatgatttg
gtcccagttttgatttatgttgtgataatggccaatcctccgtatttattgtcaacgatt
caatatgtgaacgcatttattggcgaagaaatcgaaggcgaggatcagtactggtggact
cagttctgttcagcggtccaatttatcaaaaccatggactatcgcgattaa
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integrated database retrieval system
