Contarinia nasturtii (swede midge): 116342477
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Entry
116342477 CDS
T08003
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cns04990
]
116342477
Domain-containing proteins not elsewhere classified [BR:
cns04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
116342477
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
YopD
Motif
Other DBs
NCBI-GeneID:
116342477
NCBI-ProteinID:
XP_031625970
LinkDB
All DBs
Position
Unknown
AA seq
1244 aa
AA seq
DB search
MEYKYWSWFGVCLCILLNIFGFYWLFVLFISILCFVLGIVTIVYLHHKGEKNILDRRKTQ
HLAFDQDDPLQAIKALGLNLDHDKKPIILLSPDVRIQTESKKHKNLPLHSDSRKKSLIDS
GIELLFKKSSKSVKDGGIVSQTISHPLSIDYKSSAEKISVPANYVDKEISSHHSGSSADE
HHKWKLFDTIKIHTDKRRSVETTGDVHMGEECGAVPVIETTPIYKLHNDSAVLDQHGSPK
KKFRTMLSGHKQIDQLLHTIINYILRDFIDSWFFSLSDNKEFSEFRTRNCIEESVQNVCT
RVKNTQWVPLMTTKLVDIVAMHARLYRKANATLNLQLDETKSSSGSSQSSFQMHTSNSSP
QRQSKNANRKMNQHRRNKSETDLNFNNQSVQRTFGNSKFYESVDHSRKKSTDKSPVGDAS
EAKLITAFFNQCELYREECLDDQVLEDYLTHCMETVLYFTIPEDDFACIPLRMFLSTLLA
NVVCKPVIDLLSEPDFINLQVAKSLTKEPPTSEIFLKLLRQCDDAAELRAVRQLITKEMD
AKYKDPNASAEMSSLKYAQKMIDLRLSYMQNNKRETERDCSSTANLPIIQLDELLNKELT
LSYYLDYLSVSNHQRYVIFYLSAKDWKATVTRYTVELQSNKLKGARDDVIKLLRSKATNI
YTEYLEQTSSNALNIDSGLIETLNIRLNDVSINPDPMWFESICKYVYEKIKNEDIFLANF
YRSSQYRKLLLELEFYSNYNVDGEIDSNTATQLLNQCETGSDSNSESNLTFDDEIDFIAL
DGNGSDFLTLNTGHKISPKHQVVKANEAMEKSDRTESVKTPDTHLLDVIGAGVSKHYRSH
SDCTGIVQNIDDIRIEPLPKEAGSSPVNEWKKPKSDNEGSPKHSNIPQKSDNEKVTLICP
QHRLSAKIINTAINCEGQFAVYAIQVTVIEDNQQKSWHVYRRYSRFLDLKKVLVKRFPSI
AQIPFPAKKTFQNTQRAVLEHRMTLLNEFLKMISMRADDNDELHSILRDFLEPDINDKKI
HGGAVIRTIETIVNPFKSGMRTIKNMPDTLVGGMARILLGKGPAKETAFLDVTPIHLEHS
SEYAAYPALTSALNLLDEVFDLQARSQWLRRGLINRLLGAPWVSQAANKRITQAAKTTIE
LEKIENLLGIILNTIWPDGKRSNQSVSRDENTKLRTRMAAKVALFTLLADDLKHVVGSET
TRYGLLNSFSMWQHKTLNKRLVLVLFNELLTTLYQTDDLTKHVK
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggagtataaatattggagctggtttggcgtttgtctgtgcattctactcaacattttc
ggattttattggctatttgtgctatttatctccattttatgctttgtacttgggatcgta
actattgtgtatttacatcataagggcgagaaaaacattctagatcgccgaaaaacacaa
catctagcattcgatcaagatgacccgttgcaagcgatcaaagcccttggactaaatcta
gatcatgataaaaaaccaataattttgctatcgcccgatgtacgcatccaaactgagtca
aaaaagcacaaaaatttgccattgcattctgattcgcggaaaaagagcctgatcgattcc
ggcattgaacttctattcaaaaaaagttcaaaaagtgttaaagatggcggcatcgtttca
caaacaatatcccatccattatcaattgattataaatcttctgcagagaaaatatctgtt
ccagccaattatgtggacaaggagatttcaagtcatcacagtggcagttcggcagacgaa
catcacaagtggaaactttttgataccataaaaattcacacggataagcgacgttcggtt
gagacaacgggtgatgttcacatgggcgaagaatgtggtgcagtgccagtgatcgaaaca
actcccatctataaattacataacgattcagcggtattagatcaacatggatcgccaaag
aagaaattccgtacaatgctgagcggtcacaagcaaatcgatcaattgttacacacaatc
atcaactatattttgcgggactttatcgattcgtggtttttttcgttgtcggataacaaa
gaattcagtgagtttcgaacacgtaactgcattgaagaaagcgttcagaatgtgtgcact
cgagtgaaaaacacacaatgggtgccattgatgaccacaaaattagtagatatcgttgca
atgcatgcacgactgtatcgaaaggccaacgcaacattgaatttacaattggacgagacg
aaatcatcgtcgggtagtagccaaagttcatttcaaatgcatacgtcgaattcatcgcca
caacgccaatcaaaaaatgccaatcgaaaaatgaatcaacatcgacgcaacaaaagcgaa
accgatctcaattttaataatcaatccgttcaacggacatttggcaattcgaaattttac
gaatcagtggatcacagtcgaaaaaagtccaccgataaatcgccggtcggcgatgccagc
gaagccaaacttattacagcattttttaatcaatgcgaactatacagggaggagtgttta
gacgatcaagtgcttgaagattacttgacacattgtatggaaacggtgctttattttacg
ataccggaagatgattttgcatgcattccattacgaatgttcctaagcactttgctagcc
aatgttgtgtgcaaaccagtcatcgatttgttatcagaaccggattttatcaatttacaa
gttgccaaatcgttgacaaaagaaccaccgaccagtgaaatttttctaaaattattacgc
caatgtgatgatgcggccgaattgcgggccgttcgacaattaattacaaaagaaatggat
gcgaaatacaaagatccaaatgcatctgctgagatgagcagcttaaaatatgcacagaaa
atgattgatttgcgattgagttacatgcaaaataataaacgtgaaacagaacgtgattgt
agttccacggccaatttaccaattattcaactggacgagctcttgaacaaagaactaaca
ctttcttattatttggattatttgagtgtgtcaaatcatcaacgttatgtgatattttat
ttatcggcaaaagattggaaagccacagtaaccagatatacggttgaattacagtcgaat
aaattgaaaggagcccgtgacgatgtgatcaaattgcttcgcagcaaagctaccaatatt
tacacagagtatttggaacaaacatcatcgaatgcgttgaatattgactctggtctgatt
gaaaccctgaacattcggttgaacgatgtgtcaattaatccggatccaatgtggttcgaa
tcgatttgtaaatatgtttacgaaaagataaaaaatgaggatatttttctagcgaatttt
tatcgaagttcacaataccggaaattgctgttggaactagagttttacagtaactataat
gtagacggtgaaattgattcaaatacagccacacaattgctgaatcagtgtgaaacaggc
agcgacagtaattcggagagcaatttgacgttcgacgacgaaattgattttattgcgtta
gacggaaatggcagcgatttcttaacactgaatacgggacataaaatttcaccgaaacat
caagtagttaaagcaaatgaagcaatggaaaaatccgataggacggaatcagtcaaaact
cctgacacccatttacttgatgttattggtgctggtgttagcaaacattatcgatcgcac
agcgattgcaccggaattgttcagaatattgacgatatccgaattgaaccattacctaaa
gaagctggatcttctccagtcaacgaatggaaaaaaccgaaaagtgacaatgaaggatct
cccaagcatagcaacattccccaaaaaagtgacaatgaaaaagtgacgttaatttgtccg
cagcatcgattatcagcgaaaatcatcaatacagcgatcaattgtgaaggtcaatttgcc
gtttatgctattcaagtcaccgtcatcgaagataatcaacagaagagctggcatgtctat
cgcagatactctagatttttggacttgaagaaagtgctagtaaaacggtttccatcgata
gcgcaaattccctttccagcaaagaaaacgtttcaaaatacacagcgtgcagtgttggaa
catcgtatgacattactgaacgaatttctaaaaatgataagtatgcgggctgacgataat
gatgaacttcattcgatcctacgtgactttctcgaaccagacataaatgataaaaaaatc
cacggcggagctgtcattagaacgattgaaacgattgtgaatccatttaaatcaggaatg
cgtacgataaaaaatatgcctgacacattagttggaggcatggcacgaatacttttgggc
aagggaccggccaaagaaactgctttcttggatgtcacaccaatacatctggagcactcg
tccgaatacgcagcatacccggcgttaacatcggctctaaatttattggatgaagtgttt
gatttacaagcacgatcacaatggcttcgtcgtggattgatcaatcgacttttgggtgct
ccatgggttagtcaagcggccaacaaacggatcactcaggcggctaagaccactattgaa
ttggagaaaatcgaaaatttgctcggaattatattaaacacaatttggccggatgggaag
cgatcaaatcagagtgtttcacgtgatgaaaacaccaaattgaggacacgaatggctgcg
aaagtggctcttttcactctattagcagatgatttaaaacatgtagtgggatcagagaca
actcgttatggattattgaatagtttttccatgtggcaacataaaacactgaataaacga
ctggtgctcgtgctattcaatgaactactgacaacactctatcaaactgacgatttaaca
aaacatgtcaagtaa
DBGET
integrated database retrieval system