Contarinia nasturtii (swede midge): 116342575
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Entry
116342575 CDS
T08003
Name
(RefSeq) ribonuclease Z, mitochondrial-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cns03016
]
116342575
Enzymes [BR:
cns01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
116342575
Transfer RNA biogenesis [BR:
cns03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
116342575
Prokaryotic type
116342575
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_4
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
116342575
NCBI-ProteinID:
XP_031626112
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MSYLLNALSITSKRNVFSINVVKRTYRTKKKEHSSLIKVGVIGSGSFGDPASLLVKTCDN
FANVFNCGEGTFRIMYSRSNRFRYLSNVFLTSDRWERVGGLPSLARAVHDRNLLFPTIHG
PPNVENYLRKFAELTDLDPDDAMTEQTFCRKPYYFDSYLEVDYVDLHRENAPASEQTNVM
AFVCRVRPRKGTVIVGKFTENNIPNDYIKTINNGLDVTLPDGRIILAKDYLSPSFYGANF
LIIEIPTKEYLHNLERNDLLNEHLNEINANVGMEFVAHFSSNDIIQTPEYQQFLRRINAR
KHFALNETALYSGLKYAHLNQNTMNQLDAGIYPHLRSKYTKDHPLYRHMNNENNDICISD
PIQIEPTITGTLYLFSVNGNMGPLEETKDDEDAVEDSSSEDDVADQDTTIEMATTRTNAF
PKVIFFGTGSSFPGVTKTVTSILVHTAPDTSILLDCGEGTVGQICRFYGSQTEEIIKNIK
ALHITHMHGDHHMGVMDFIRMRQKYMPENRNPLLLMAPKDEFGALLNFYEENFGNVLCEF
MMIDNKDLINSSLTDEQKAILKINDLKTCRVEHIENSYAICIKSNILPENMEEFKLTFSG
DTIPCDALVELGKNSTLLIHEATLEDTLASSAAMKKHSTISQAIEQSEKMNAKYTILTHF
SQRYRLLPPINRELMENKNIGIAFDNMEIVPDDLSKLNDIYFKLTEKYAEELVRMEARSK
RYAQRSDFNSFT
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatttattaaacgcattgagtataacatccaaaagaaatgttttctctataaat
gtagtgaaacgaacatacagaaccaaaaagaaggaacattcaagccttattaaagtggga
gtgattgggtccggttcgtttggcgatccagcttctttgctagttaaaacttgtgacaac
tttgcaaatgtattcaactgtggtgagggaacgtttcgtatcatgtattctagatcaaat
cgtttccgctatttatcgaatgtatttttaacaagtgatcgctgggaacgagtcggagga
ttgccatcattagcacgagcagttcacgaccgaaatttactatttccaacaattcatggg
ccaccaaacgttgaaaattatctacgtaaatttgctgagcttaccgatcttgatccagat
gatgcaatgacagagcaaacattttgtcgtaagccatattactttgactcttatttggaa
gtcgattatgtcgatttacatcgtgaaaatgcgccagcttcagagcaaacaaatgttatg
gcgtttgtttgtagagtcagaccacgtaaaggaactgttattgtgggaaaattcaccgaa
aacaatattccaaatgattacattaaaaccataaataatggcttggatgtcactctgccc
gatggaagaattattttggcaaaagattatttatcgccgagcttttatggcgcgaatttt
ttgataatcgaaatacctacaaaagagtatttgcacaatttggagcggaatgatttattg
aatgaacatttgaatgaaataaatgcaaacgtgggaatggaatttgtggcacatttttca
tcaaacgatatcattcaaacacccgaataccaacagtttttgcgacgcatcaatgccaga
aaacattttgccttgaatgagactgctttgtatagcggtttaaaatatgcacacttgaat
caaaatacaatgaatcaactggatgccggcatttatccacatcttcgttcaaagtatact
aaagatcatccattatatcggcatatgaataatgagaataatgatatttgcataagtgat
ccaattcaaattgaaccaacgataactggcactttatatctgttctcggttaatggaaat
atgggcccactggaggaaacaaaagatgacgaagacgctgttgaagacagtagtagtgaa
gatgatgtagctgaccaagatactacaatagaaatggccactacacgaaccaatgctttt
ccaaaagtaatattttttggtacaggctcttcatttccaggtgttacaaagacagtaacc
tcaattttagtacatactgcaccagatacatcgattttgcttgattgtggcgaaggaacc
gttggtcaaatatgtcgattttatggtagtcaaactgaagaaattattaaaaacataaaa
gcactgcatataacccacatgcatggcgatcatcatatgggagttatggactttattcgt
atgcgacaaaagtatatgccagaaaatcgaaatccactattgttaatggcaccaaaagat
gaattcggtgcgttgctcaacttctatgaagaaaattttggcaatgttctatgtgaattt
atgatgatcgacaataaagatttgataaattctagcctaaccgatgaacaaaaagcaata
ctcaagattaatgacttgaaaacatgtcgagtggagcatatagaaaattcctatgcgatt
tgcataaaatcaaatattttaccagaaaatatggaagaatttaagctcacatttagcggt
gatacaataccatgtgatgctttggttgagctcggcaaaaattcaacattgctaatacat
gaggcgaccctagaagatacattagccagcagtgctgcgatgaaaaaacatagtacaata
tcgcaggcaattgaacaatccgaaaaaatgaatgccaaatacacaatattgacacatttc
agccagcggtaccggttgctaccgccaataaatagagaacttatggaaaacaaaaatatc
ggcattgcttttgataatatggaaattgttccagacgatttaagtaaattaaatgatata
tattttaaacttaccgaaaaatatgccgaagaattagttcgaatggaagcgagatcaaag
agatacgcacagcgaagtgattttaattcattcacttag
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