Contarinia nasturtii (swede midge): 116342628
Help
Entry
116342628 CDS
T08003
Name
(RefSeq) small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116342628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cns03019
]
116342628
03041 Spliceosome [BR:
cns03041
]
116342628
03032 DNA replication proteins [BR:
cns03032
]
116342628
Messenger RNA biogenesis [BR:
cns03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
116342628
Spliceosome [BR:
cns03041
]
Complex A
U1 snRNP components
Sm proteins
116342628
U2 snRNP components
116342628
Complex B
U1 snRNP components
116342628
U4/U6.U5 tri-snRNP components
116342628
Complex C
U2 snRNP components
116342628
DNA replication proteins [BR:
cns03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
116342628
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF150_C
Motif
Other DBs
NCBI-GeneID:
116342628
NCBI-ProteinID:
XP_031626175
LinkDB
All DBs
Position
Unknown
AA seq
88 aa
AA seq
DB search
MSMAMPINPKPFLNGLTGKAVQVKLKWGHEYRGYLVSVDGYMNMQLANTEEYIDGQSTGH
LGEVLIRCNNVLYISGISDDDEEGEMRD
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatggcaatgccaatcaatccaaaaccatttttaaatggtctcaccggtaaagcc
gttcaagttaaactcaagtggggtcacgaatacagaggatacttggtttcagtcgatggt
tacatgaacatgcaattggcaaacacagaagaatacatcgacggtcaatcgacaggtcat
ttgggtgaggtgttgattcggtgcaacaatgtcttgtacatttcgggcattagcgatgac
gatgaagagggcgaaatgagagattaa
DBGET
integrated database retrieval system
