Contarinia nasturtii (swede midge): 116342641 Help Entry 116342641         CDS       T08003                                  Name (RefSeq) clathrin heavy chain   KO K04646   clathrin heavy chain Organism cns  Contarinia nasturtii (swede midge) Pathway cns04142   Lysosome cns04144   Endocytosis cns05100   Bacterial invasion of epithelial cells Brite KEGG Orthology (KO) [BR:cns00001]  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     116342641    04142 Lysosome     116342641  09160 Human Diseases   09171 Infectious disease: bacterial    05100 Bacterial invasion of epithelial cells     116342641  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cns04131]     116342641   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:cns04147]     116342641 Membrane trafficking [BR:cns04131]  Endocytosis   Clathrin-mediated endocytosis    Clathrin     116342641 Exosome [BR:cns04147]  Exosomal proteins   Proteins found in most exosomes    116342641 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Clathrin Clathrin_propel Clathrin_H_link Clathrin-link TPR_COPA_B TPR_Vps41 HEAT_Nup120 Motif Other DBs NCBI-GeneID:  116342641 NCBI-ProteinID:  XP_031626187 LinkDB All DBs Position Unknown AA seq 1676 aa AA seqDB search MSQPLPIRFQEHLQLTNAGINANAISFTTLTMESDKFICVREKVGDANQVVIIDMNDTNN PIRRPISADSAIMNPASKVIALKAQKTVQIFNIEMKSKMKAHAMTEEVVFWKWISLNSLA LVTETSVYHWSMEGDSTPQKMFDRHATLNGCQIINYRTDPKQQWLLLVGISALQHRVAGN MQLYSVERKVSQAIEGHAAAFATFKLEVNPEPSTLFCFAVRSAQGGKLHVIEVGTPTTGN QPFTKKAVDVFFPPEAQTDFPVAMQVSAKYDVIYLITKYGYIHMYDIESGTCIFMNRISA DTIFVTAQHESSGGIIGVNRKGQVLSVTVDEEQIIPYITNVLQNTDLALRMAVRNNLSGA EDLFVQRFNALFQNAQYAEAAKVAALAPKGILRTPQTIQKFQQVQTPAGASSPPLLQYFG ILLDQGKLNKYESLELCRPVLLQGRKQLCEKWLKEEKLECSEELGDLVKPTDLTLALSIY LRANVPNKVIQCFAETGQFQKIVLYAKKVNYTPDYVYLLRSVMRTNPEQGASFAGMLVAD EEPLADINQIVDIFMEQNMVQQCTAFLLDALKRNLPQEGALQTRLLEMNLLSAPQVADAI LGNSMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNADWLVGFFGTLS VEDSLECLKAMLTANIRQNLQICVQIATKYHEQLTTKALIDLFENFKSYEGLFYFLGSIV NFSQDSEVHFKYIQAACKTNQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCD RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEDIIKNLILVVKGQ FSTDELVEEVEKRNRLKLLLPWLESRVHEGCIEPATHNALAKIYIDSNNNPERFLKENQY YDSRVVGKYCEKRDPHLACVAYERGQCDRELIAVCNENSLFKSEARYLVRRRDTDLWAEV LAESNPYKRQLIDQVVQTALSETQDPDDISVTVKAFMSADLPNELIELLEKIVLDSSAFS DHRNLQNLLILTAIKADNTRVMDYINRLDNYDAPDIANIAIGNQLYEEAFAIFKKFDVNT SAIQVLIEHVNNLERANEFAERCNEPAVWSQLAKAQLQQGLVKEAIDSYIKSDDPSAYMD VVETASKAGSWDDLVRYLQMARKKARESYIESELIYAYARTGRFADLEEFISGPNHADIQ KIGDRCFNDGMYDAAKLLYNNVSNFARLAITLVHLKEFQGAVDSARKANSTRTWKEVCFA CVDAQEFRLAQMCGLHIVVHADELEDLINYYQDRGHFDELIALLEAALGLERAHMGMFTE LAILYSKYKPSKMREHLELFWSRVNIPKVLRAAEQAHLWSELVFLYDKYEEYDNAVLAMM AHPTEAWREGHFKDIVTKVANIELYYKAIQFYLDYKPLLLNDMLLVLAPRMDHTRAVNFF TKTGHLQLVKPYLRSVQTLNNKAINEALNELLIDEEDYQGLRTSIDAFDNFDNIALAQRL EKHELTEFRRIAAYLYKGNNRWKQSVELCKKDRLFKDAMEYAAESGKQEIAEELLGWFLE RKAFDCFSACLYQCYDLLRPDVIMELAWRHKIMDFAMPYMIQVMRDLTTKVEKLEANDAQ RQKDGEQTEEKSIILPEPQLMITAGPMGMVPQQYGYGNVPPAAYQQPQHPYPGYGM NT seq 5031 nt NT seq  +upstreamnt  +downstreamnt atgtcgcaaccattgcctattcgtttccaagagcatttacagctcacaaatgccggcatt aatgcaaacgccatctcgttcacgacgctcacgatggagtcggataaatttatttgtgtg cgtgaaaaagtcggcgatgcaaaccaagttgtcatcatcgatatgaatgacacgaacaat ccgattcgtagaccgattagcgccgattcagcaattatgaatccagcgagtaaagtcatt gccttgaaagctcaaaaaacggtacaaattttcaacattgaaatgaaatcgaaaatgaaa gcgcatgcaatgacagaagaagtggtcttctggaaatggatttcgttgaattcgttagca ttggtaacggaaacatcagtctaccattggtcaatggaaggtgattcaacaccacaaaag atgtttgatcgtcatgcaacactgaatggttgccaaatcatcaactaccgtacggatcca aagcaacaatggttgcttctagttggtatatcggcgcttcaacatcgcgtcgctggtaat atgcaattgtattccgtagaacgaaaagtgtcacaagcaattgaaggtcatgcagctgca ttcgcaacattcaaactggaagtgaatccagaaccatcgacactgttctgtttcgccgtt cgatcagcacaaggtggaaaattgcatgtcatcgaagttggaacaccaacaactggcaat caaccatttacaaagaaagcagtcgatgtcttcttcccaccagaagctcaaactgatttt ccagttgcaatgcaagtatcggccaaatacgatgtcatctatttgatcacaaagtatgga tacattcatatgtacgacattgaatcaggcacatgcattttcatgaatcgtatatcggcc gatactatttttgtgacggcacaacacgaatcgagtggaggtattattggtgtcaatcga aagggtcaagttttgtctgtgaccgttgacgaagaacaaataattccatacattacgaat gtactacaaaataccgatttggccttacgaatggctgtgcgtaataatctatccggtgct gaagatttattcgtccaacgatttaatgcacttttccaaaatgcgcaatacgctgaagcg gccaaagttgctgcattagcaccgaaaggcatcttacgtacaccgcaaacgattcagaaa ttccaacaagttcaaacaccagccggtgcctcatcaccaccattactgcaatactttggc attttactcgaccaaggtaaattgaataagtatgagtcgttggaattatgccgtccggtt ctattgcaaggacgcaaacaactatgcgagaaatggcttaaggaggagaaacttgagtgc agcgaagaattgggcgatttggtgaaaccgaccgatttaacattggctctatcaatttat ttgcgtgccaatgtaccgaacaaagtgattcaatgctttgccgaaactggccaattccaa aagattgtgctgtacgccaagaaggtcaactacacgcccgactacgtctatttgttgcgt tcagttatgcgtaccaatccagaacaaggggcaagctttgccggtatgcttgttgccgat gaagaaccattggctgacatcaatcaaatcgtcgatattttcatggaacaaaacatggtt caacagtgtacggcctttttattggatgcattgaaacgaaatctaccacaagaaggagct ctacaaactcgtctattggaaatgaatttgttatcagcaccgcaagttgccgacgctatc ctaggtaattcaatgtttacccactacgatcgcgcgcacattgcccaattgtgcgaaaaa gctggattgttgcagcgcgcacttgaacactacaccgatttgtatgacatcaaacgtgct gtcgttcatacacatcttttgaacgctgattggttggtcggattctttggaactctatcc gttgaagattcattggaatgcttgaaagcaatgctgaccgcaaacattcgtcagaattta caaatttgcgtacaaatcgccaccaaatatcacgaacaattaacaacaaaggcattgatc gatttgtttgaaaatttcaagagctacgagggcttattctactttttgggttcgattgtt aacttcagccaagattcagaagttcatttcaagtacattcaggccgcatgcaaaaccaat caaatcaaagaagtcgaacgcatatgccgtgaatcgaattgctacaatcctgaacgtgtt aaaaactttttgaaggaagccaaactcaccgatcaattgccattgatcattgtatgcgat cgctttgactttgtacatgatttggtattgtatttgtatcgtaacaacttgcaaaaatac attgaaatctatgtgcaaaaagtgaatccatcacgtttgccagtcgttgttggtggattg cttgatgtcgattgctccgaagatatcatcaaaaatttgattttagtggtaaagggtcaa ttctccaccgatgaattggtcgaagaagttgaaaaacgtaatcgcttgaagctacttttg ccatggttggaatcacgtgtacatgaaggatgcattgagccggccacacataatgcattg gccaaaatctacatcgattcaaacaacaatccggaacgtttcctaaaagagaatcaatac tacgacagtcgcgtggttggaaaatactgcgagaaacgtgatccacatttggcatgcgtt gcatatgaacgtggacagtgtgatcgtgaattgattgctgtatgcaatgaaaattcattg ttcaaatcggaagcacggtatttggtgcgtcgtcgtgatactgatttgtgggccgaagtt ttggccgaaagtaatccatataagcgacaattgatcgatcaagttgtacagacagcattg tcagaaactcaagatcccgatgacatttcagtcaccgttaaggcattcatgtcggccgat ttaccaaatgaactcatcgaattgctcgagaaaattgtattggattcgtcagccttttct gatcatcgtaatttgcaaaatcttttgattttgacagctatcaaagccgataacactcgt gtcatggactacatcaaccgtttggataactacgatgcaccggatattgccaacattgct atcggaaatcaattgtacgaagaagcctttgcaattttcaagaaattcgatgttaacacc tcagccattcaagtattgattgaacatgtcaataatttggaacgggccaacgaatttgct gaacggtgcaatgaaccggctgtgtggtcacaattggcaaaggcacaattacaacaaggc ttggtgaaggaggccatcgatagttacattaaatcggacgacccaagcgcctatatggat gtcgttgaaaccgccagcaaagctggttcatgggatgatttggtgcgttatttgcaaatg gcacgcaagaaggcacgcgaaagttacatcgaaagtgaattgatttatgcatacgctcga actggtcgttttgctgatttggaagaattcatttcggggccaaatcatgccgatattcag aaaattggtgatcgttgcttcaacgatggaatgtacgatgcggccaaattgctctataac aatgttagcaactttgcacgtttggccatcacactggtacacttgaaggaattccaaggt gctgtggatagtgcacgtaaagcaaattcgacacgtacatggaaagaagtttgtttcgcc tgtgttgatgcccaagaattccgtttggcacaaatgtgcggtcttcatattgtcgtccat gctgatgagctcgaagatttaattaactactaccaagatcgtggacatttcgatgaattg attgctctattggaggctgcattgggcttggaacgtgctcatatgggcatgtttacagaa ttggcaattctctactcgaaatataaaccatcaaagatgcgcgaacatttggaattgttc tggtcacgtgtaaacattccaaaagtgttacgtgctgccgaacaagcacatttgtggtca gagttggtatttttgtacgataaatatgaagaatacgacaatgctgtgctcgccatgatg gctcatccaacggaagcatggagagagggtcatttcaaagatattgttacaaaagtggcc aacattgaattatattacaaggccattcaattctatttggactataaaccattgctattg aatgacatgcttttggtattggcaccacgcatggatcacactcgggctgttaactttttc acaaaaaccggtcatttgcaactcgtcaaaccgtatttgcggtcggtacaaaccctcaac aacaaagcaatcaacgaagctttgaatgaattgctgatcgacgaagaagactaccaaggt ctgcgtacatccatcgatgcattcgataatttcgataacattgcattggcacagcgatta gaaaaacacgaacttactgaatttagacgcattgccgcatacttgtacaaaggcaacaac cgctggaaacaaagtgttgaactgtgcaaaaaagatcgtttattcaaagatgcaatggaa tatgccgccgaatcaggaaaacaagaaattgccgaagagctactgggatggttcttggaa cgcaaagcatttgactgtttctccgcctgcctttatcaatgctatgatcttttgcggcct gatgttattatggagttagcatggcgacacaagatcatggactttgcaatgccctacatg atccaggtgatgcgtgatttaactacaaaagtggaaaaattggaagcaaatgatgcacaa cgacaaaaagacggcgaacaaacggaagagaaaagtatcattttgcctgagccacaattg atgatcaccgcgggtccaatgggtatggtaccacaacaatatggatacggtaacgttcca cccgctgcttatcaacaaccacaacatccatatcccggatatggcatgtaa

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