Contarinia nasturtii (swede midge): 116342739
Help
Entry
116342739 CDS
T08003
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03020
RNA polymerase
cns03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116342739
09124 Replication and repair
03420 Nucleotide excision repair
116342739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cns03021
]
116342739
03400 DNA repair and recombination proteins [BR:
cns03400
]
116342739
Transcription machinery [BR:
cns03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
116342739
DNA repair and recombination proteins [BR:
cns03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
116342739
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
PH_PHS1
Motif
Other DBs
NCBI-GeneID:
116342739
NCBI-ProteinID:
XP_031626320
LinkDB
All DBs
Position
Unknown
AA seq
117 aa
AA seq
DB search
MNAPPTFESFLLHEGEKKIVKELDTKVPNAAIFTVNKEDHTLGNMIRNQLLKDPHVLFAG
YKNPHPLEHKFVLRIQTTSDYSPQEAFMNAITDIISELSLFEERFKEALKEKKEGGD
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgccaccaacctttgaatcgtttttattgcatgagggagagaagaaaatcgtc
aaggagctcgatacaaaagtaccaaatgccgcaattttcaccgtaaacaaagaggaccac
acattgggcaacatgattcgcaatcaattgttgaaagatccacatgttttgtttgccggc
tacaaaaacccgcatccattggaacataaatttgtgcttcgcatccagacaacgtccgat
tactcaccacaagaagctttcatgaatgccattaccgatatcatttccgaactgtcgctg
ttcgaagaacgtttcaaggaagcactcaaagagaagaaggaaggaggcgactaa
DBGET
integrated database retrieval system
