Contarinia nasturtii (swede midge): 116342741
Help
Entry
116342741 CDS
T08003
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116342741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cns03009
]
116342741
Ribosome biogenesis [BR:
cns03009
]
Eukaryotic type
Pre-60S particles
GTPases
116342741
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
EF-G_D2
GTP_EFTU_D2
EFG_III
MMR_HSR1
EFG_IV
WH_MCM3_C
Motif
Other DBs
NCBI-GeneID:
116342741
NCBI-ProteinID:
XP_031626321
LinkDB
All DBs
Position
Unknown
AA seq
1032 aa
AA seq
DB search
MTSITKDTLVKLQKNVKSIRNICILAHVDHGKTTLADSLVASNGIISQRMAGQMRYMDSR
PDEQERGITMKSSCISLLFNDFRGSKENFIINLIDSPGHVDFSSEVSTAVRLCDGAIVLV
DVVEGVCPQTRICLKQAYIENLKPILVLNKIDRLILEKKLTPLDAYVHILQVLEQVNAAM
GNIFASDVLLKEVKTSNNDQISALEDCDDSAIYFTPESGNVLFSSAIDGWAFRIRDFAEV
YASKLNISVDKLEQVLWGDYYYNTKKQECMKGAQEKAKKPMFVQFVLENIWNLYELIAVR
KDKEKIPDIAEKLGIKITTRDLRSTDPKVHIQSIFSQWLPLERTLLEMVVRLCPHPGKLS
DEKATQLMCSLNQNFEALPTQTQALKTEFMNSSAESETVIAYISKMIAVNKSVLPENKPK
PLTREEIERRRELAKQRLQQRNNELEAKLAGISLDDTNSSENKKEDETKDKDQVDEIPKD
EDDNIFIAFARVYSGTLKKGSKIYALTPKHDPSSIVDLADPTSSPYVKEVTIENLYMLMG
KELEELEEVPAGNIVGIKGLQEQVLKTATLSSNPFCSSFCDLTIMATPIYRVAVEPKNIT
DLPKLKKGLKLLNQADACVQVIVQENGEHVLVTLGEVHLERCVYDLEREYAKCAINVSLP
IVPLRETIVRQAKLDMVNEEIVLTAEEKKADKSVVIHTANQQCCIKMVALPLPKNVIDLI
ESNYELLRSATQIIDLSDRTKNRLKEFREQLAVAFKENGQDQDIFQRNDLIDLIWSFGPK
KCGTNILINLTDFKHQHVWSSFDGTAKSNLNDGSGRDARYDLENSLLNGYQLATAAGPLC
EEPMHGVCFLVEEWVINENDESSLSIGSIAGQLISLIKDACRKAFQNQPQRLVTPMYSCS
IIVSNEVLGKMYAVIGKRNGKILSADLMQGSGTFIIKAILPVIESYNFSQEIRKQTSGLA
YPQLMFSHWETIDIDPYWIPSTEEEYLHFGEKSDSQNLAKLYMDSVRKRKGLFVEEHVVE
NAEKQRTLSKNK
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaataacgaaagatacattagtgaaattacagaaaaatgtgaaatcaattcgg
aatatttgcattttggctcatgtagatcatggcaaaacaacgttggcagattcgctcgtc
gccagcaacggtattatctcacaacgcatggccggccaaatgcgatatatggacagcaga
cctgatgagcaggaacgaggaatcacaatgaaaagtagttgtatatcgttattgttcaat
gattttcgtggatcaaaggaaaatttcattatcaatttaattgattcgcctggtcatgtg
gatttttccagtgaagtttcgacggctgtgcgattatgtgatggtgccattgttttggtt
gatgttgtcgaaggtgtttgtccgcaaactcgaatttgtctgaaacaggcgtacattgaa
aatctcaaaccaatacttgtgttaaacaaaattgatcgattaattttagaaaagaaactt
accccactcgatgcctacgtgcacattttgcaagttcttgaacaagtgaatgcagcaatg
ggcaatatttttgcttcggacgtattgctcaaagaagttaaaacgagtaataacgatcag
atttctgctttggaagactgcgatgattctgcgatatattttacaccagaaagtggaaat
gtcctgttttcatcggccatcgacggttgggcttttcgtattcgagactttgctgaggta
tatgcaagcaagctaaatatttctgttgataaattggagcaggtattgtggggtgattat
tactacaataccaaaaagcaggagtgtatgaaaggtgcacaagagaaagcgaaaaaacca
atgttcgtgcagttcgtattggaaaatatatggaatttgtatgagttgattgccgtgcga
aaagataaagagaaaatcccagacatcgctgagaaattgggtattaaaataacaacacga
gatttacgttcgaccgatccaaaagtgcatattcaatcaattttttcacaatggttacca
cttgaacgaactttacttgaaatggtagtacgtttatgtccccaccccggaaaactatcc
gacgaaaaagcaacgcaattgatgtgctcactaaatcaaaattttgaagcacttccaaca
caaacacaagcattaaaaaccgagttcatgaattccagtgctgaaagtgagactgtgatt
gcctatatttcgaaaatgattgcagtaaataaatcagtattaccggaaaataaaccaaaa
ccactaacacgcgaggaaattgaacgaagacgtgaattggcaaaacaaaggttacaacaa
agaaataacgaattggaagcaaaattagccggtatttcattggatgacacaaattcaagt
gaaaataaaaaagaagatgaaactaaagataaggatcaagtcgatgaaattccaaaggat
gaggacgataacattttcattgcattcgcccgggtgtatagtggaacgctgaaaaaaggc
tcaaaaatctatgcattgacaccgaaacatgatcccagttcgattgttgatctggccgac
ccaacgtcatcgccatacgttaaagaagtaaccatcgaaaatttgtacatgttaatgggc
aaggaattggaagagttggaagaagtgccggccggcaacattgttggcatcaaaggattg
caagagcaagtgttgaaaacggcaaccttatcgagcaatccattttgttcgtcattttgt
gatttaactataatggccactccaatttaccgtgttgccgtggaaccaaaaaacatcacc
gatttaccgaaattgaaaaaaggattaaaactactaaatcaagctgatgcctgtgttcag
gtaattgtccaagaaaatggtgaacatgttttggtgacattgggcgaagttcatttggag
cgatgtgtttacgatttggagcgtgaatacgcaaaatgcgcaataaatgtgtcgctgcca
atagtaccgttgcgagaaacaattgtaagacaagccaaacttgatatggtgaatgaagag
attgttttgaccgccgaagaaaagaaagcagataaaagtgttgtaattcacacggcaaat
caacaatgttgtattaaaatggtggcgcttccattgccaaaaaatgttattgatttaatt
gaatcaaactatgaacttttgagatcagctacacagattattgatttaagcgatcgcaca
aagaatcggcttaaagaattccgtgaacagcttgcggtggcatttaaagaaaatggccaa
gatcaagacattttccaacgaaacgatttaattgatttaatttggtcatttggaccgaaa
aagtgcggcacaaatattttaatcaatttaaccgattttaaacatcaacatgtttggagc
tcatttgacggaacggccaaatcgaatttgaatgatggatcgggccgagatgcaagatat
gatttggaaaattcacttttgaacggatatcaattggcaacagcagctggaccgctgtgc
gaagagccaatgcacggcgtttgctttttggtcgaggagtgggtcataaatgagaatgat
gagtctagtttgtcaattggatcgattgccggtcaacttatatcactaattaaagatgcg
tgtcgcaaagcctttcaaaatcaaccacaacgcttggtcacacccatgtacagctgctca
attatcgtttcaaatgaagttttaggtaaaatgtatgcggtgattggaaaacgaaatgga
aaaattctatcagctgatttgatgcaaggaagtggcacgtttattataaaggccattctc
cctgtcattgaatcctataatttttcacaggaaatacgtaaacagacatctggtcttgca
tatccacagctcatgtttagccattgggaaaccatcgatattgatccctattggatacca
tcaacggaagaggaatatttacattttggcgaaaaatccgattcacagaacctggccaaa
ctttacatggactcggtgcgcaaacgaaaaggactatttgtcgaagagcatgtcgttgaa
aatgcagaaaaacaacgaacactctcaaagaataaataa
DBGET
integrated database retrieval system