Contarinia nasturtii (swede midge): 116342829
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Entry
116342829 CDS
T08003
Name
(RefSeq) chromatin-remodeling ATPase INO80
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116342829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cns03036
]
116342829
Chromosome and associated proteins [BR:
cns03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
116342829
INO80 complex (yeast)
116342829
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
HDA2-3
ResIII
Motif
Other DBs
NCBI-GeneID:
116342829
NCBI-ProteinID:
XP_031626449
LinkDB
All DBs
Position
Unknown
AA seq
1473 aa
AA seq
DB search
MNDSTMPNAINFNLNHGQPVAKPLYIQRLEASLNIDPFMSYAQEILSQPLSSSEESDSDV
NTDILAPDEKIMNGIVTSKCDRQNDKLQIYNLSQIGSDRKWLQDILLSDTETEPEPSDED
EYIRDMLKEHVKEKKIRSKYYQNPHNSQFGYYGASILSNVDMYSEHQHKIVGVTKQKKVK
LTKTGKFRKSKKKRGVKTDNENLEPGEIVWDDDMSLTKDDSNDNRDSKGNGMAMTRKQRK
KNALSKTPEAIAARRRKLWILMAKKELGKVQRAKVNNHKEIVSSCKRISTLCMKTFRQKA
MQSQKNMKETIWRAKRLTREMQGYWKRYDRVERETKRRMEKEAEEQRKMDIELIEAKRQQ
RKLNFLITQTELYAHFMSKKLGKGTEEEQLRILNQLDEEVNPRLAALDDYNSDKMKQMAQ
RQAKEAFNTERERTKKFDTLSKQDPLSPLQLHTDGSIEELPQPSIFQGNLKGYQIKGMTW
LANLYDQGISGILADEMGLGKTVQSIAFLCHIAEHYGVWGPFLIISPASTLHNWQQEMQR
FVPDFNVVPYWGSPNERKILRQFWEQKDLHTKEASFHVVITSYQLIVSDYKYFNRIKWQY
MILDEAQAIKSSSSVRWKLLLGFNCRNRLLLSGTPIQNSMAELWALLHFIMPTLFDSHDE
FNEWFSKDIESHAENKTGIDEKQISRLHMILKPFMLRRIKKDVENELSDKIEIMVYCPLT
MRQNLLYMALKKKIRIEDLLQYTDRGAEHGVDKNFTSNLMNLVMQFRKVCNHPDLFERRD
AKSPFIMKCVDYPIARLVYENSTLQQIIPSKEHLFYNRFNIFKAENVQRSLFPKDSSDRN
VEYKNVIDLNLESSFSFSRFCNWSPQELDDTHSKGTFYALLKQKWINETLKRIQYAQTWE
KSIPSRHLLLTASVKLAILSLIESEHSLIFTRWVSEHPFFTFSEQIIYSMAESIEHRIIR
SKINQTVKSEPLIQEITEKVSKREDCNLLPEHHYIPRPPRHLRCEPTSLPAFITGLAPKV
QSTRRKYYVDSRAASWHRIRNESCECTEAAELLKISFDECRPSIGWSNIQIPDKQALITD
SGKLSYLDGLLKRLKTQNHRVLIYSQMTRVIDLLEEYMWHRKHRYMRLDGSSKISARRDM
VADFQKRDDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQV
TVYRLICKGTIEERILQRAREKSEIQRMVISGGNFKPDTLKPKEVVSLLLDDEEIEQKYR
QRNEEKRRLAQEENTRLEAEKERKRKAISIKVDDQIKKFRSDKSFGESSFTDFSEKSSPA
ESLLEQPVNYESSSETVVVDCDSLSNSSSQTFLVDDLANRYRKPPPTRGAKRGRPRGSRR
GNRGGLSRDAIVDVTIPAVNSAEITEQPYDSPVNPNVNKVRRGPGRPRLKPNGPSNQGTR
GSTPKYRKPMTPLVVPLGSSPAPTPTAMSPERL
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atgaatgattcaacgatgccgaacgcaataaatttcaacttaaatcatggacaaccagtg
gccaaaccactgtacattcaacggcttgaggcaagccttaatatcgatccatttatgtca
tatgcacaagaaattctctcgcaaccattatcaagtagcgaagaatcggattccgatgtt
aatactgatattttggcaccagatgagaaaattatgaatggcattgtcacatcaaaatgt
gatcgacagaatgataaattacaaatatacaatctatcacaaattggatcggatcgcaag
tggctacaggacatattgttgagtgacacagaaaccgagccagaaccatccgatgaagat
gaatacattcgagatatgctaaaagagcatgtgaaagaaaagaaaattcgatcgaaatac
tatcaaaatccacataactcacaatttggctactatggtgccagtattctatcaaatgtt
gatatgtacagtgagcatcagcataaaattgttggcgttacaaagcaaaagaaagtgaaa
ctcacaaaaacgggcaaatttcgaaaatcgaagaaaaagcgtggcgtaaaaacggacaat
gaaaatttggaaccaggtgaaattgtttgggatgatgatatgtcattgacaaaagatgat
tcaaacgataatcgtgattcgaaaggcaatggcatggccatgacaagaaaacaacgaaag
aaaaatgcattgagtaaaacacccgaagcaattgcggcacgtcgtcgaaaattgtggatt
ttaatggcgaaaaaagagttgggcaaagtgcaacgggccaaagtaaataatcataaagaa
attgtaagcagttgcaagcgtatatcgacattgtgcatgaaaacgttccgtcagaaggcc
atgcaatcgcagaaaaatatgaaagaaacgatatggagagcgaagagattaaccagagaa
atgcaaggctattggaaacggtacgatcgggtcgaacgcgaaacaaaacgacgcatggaa
aaagaggcagaagaacaacgaaagatggatattgagcttattgaagcaaaacgacaacaa
cgcaaattgaattttttgatcacacaaacggagctgtatgcacatttcatgtcaaaaaaa
ctgggaaagggtacagaagaagagcaattgcgcattttaaatcaattggatgaagaagta
aatcccagattggcagcactcgacgattataacagcgataaaatgaaacaaatggcacag
agacaagctaaagaagcattcaacacggaacgtgaacgaacgaaaaaattcgatacgttg
agtaaacaagatccattgtcacctttgcaactccatacggacggtagtatagaagaattg
ccacagccatcaatatttcagggtaatctaaagggatatcaaatcaagggaatgacatgg
cttgcaaatctctatgatcaaggcattagcggcattttagcagatgaaatgggtttggga
aagactgttcaatcgattgcattcctgtgtcacatagccgagcattatggtgtgtgggga
ccattcttaattatatcaccggcatccacgttgcacaattggcaacaagagatgcaacgt
ttcgtacctgattttaatgtcgtaccatattggggttcgccaaacgaacgaaagatattg
cgtcaattttgggaacaaaaagatttgcatacaaaagaagcaagttttcacgttgttatc
actagctatcaactcattgtgtccgattacaagtatttcaatcgcatcaaatggcaatat
atgatactggacgaggcacaggccatcaaaagttcatcgtccgtacgatggaaattgttg
cttggattcaattgtaggaatcgtttattgttgagcggtacacccattcaaaatagtatg
gccgaattgtgggcattactgcattttataatgccaacattattcgattcacacgatgag
ttcaatgaatggttttccaaggatatcgaaagtcacgcagaaaataaaactggcattgat
gagaagcaaatatcgcgattacatatgattttaaaaccgttcatgttgcgccgtatcaaa
aaagatgtcgagaatgaattgtcggataaaatcgagatcatggtctattgtccgctaaca
atgcgtcaaaatttattgtacatggcattgaagaagaaaatacgcatcgaagatttactt
caatacaccgatcgtggtgcagagcatggtgtcgataagaatttcacatcaaatttgatg
aatcttgtgatgcaatttcgaaaggtttgcaatcatccggatttattcgaacgacgcgat
gcaaagagtccatttatcatgaaatgcgttgattatccaattgcgcggcttgtttatgaa
aatagcacactacaacaaataattccaagcaaagagcatttattttataatcgattcaac
atattcaaagcggagaatgtacagcgctcactatttccaaaagattcatctgatcgaaat
gttgagtataaaaatgttatcgatctgaatttagagagcagtttttcgtttagtcgtttt
tgtaattggagcccacaagagttggacgatacacattcgaagggaacattttatgctctt
ctcaaacaaaaatggatcaatgaaacactgaaacggatacaatatgcacaaacgtgggag
aaatcaatcccttctagacatttacttttaaccgcttccgttaaattggcgatattatca
ttaatcgaatcggaacacagtctgatctttacgcgttgggtatccgagcatccatttttc
acattcagcgaacaaattatatactcgatggccgaatcaattgagcatcgaatcattcgg
agtaaaataaatcagacagttaaatcggaaccgctcattcaagaaataaccgaaaaagta
tcgaagagagaggattgtaatttattgcctgaacatcattatataccacgaccgccaaga
cacttaaggtgtgaaccaacttcattgcctgcttttatcactggtttggcgcccaaagtt
caaagcactcgacgaaaatactatgttgacagcagagcagcatcatggcatcgaatcaga
aatgaaagctgcgaatgtacagaagctgccgaattgttgaaaattagtttcgacgagtgt
cgaccgtcaatcggatggtcaaacattcaaatacccgataaacaagcgctcatcacagat
tcgggcaaactttcttatttggatggtttgctgaaacgtctgaaaacacaaaatcatcgc
gtactaatctactcacaaatgacaagagttattgatttattggaggagtatatgtggcat
cgaaaacatcgttatatgcgattagatggttcgagtaagatatcggctcgtcgcgatatg
gttgccgattttcaaaaacgtgatgatatttttgtctttcttctgtcaactcgagccggt
ggtctaggaattaatttgaccgctgccgacacagtcatcttttacgattccgattggaat
ccaaccgtcgatcaacaggccatggatcgtgcacatcgacttggtcagacaaagcaagta
acagtgtatcgattgatttgcaaaggaacgattgaagaacgtattttacagagagccaga
gaaaagagtgaaattcaacgaatggtcataagtggtggaaatttcaaaccagatacgctt
aagccaaaagaagttgtatcacttcttctcgacgacgaggaaattgaacagaaatatcgt
caacgaaatgaagaaaagcggagattagcccaagaggagaatacacgattggaagcagaa
aaagaacgtaaacggaaggcaatttcgataaaagtcgacgatcaaattaaaaagttccgt
tcggacaaatcatttggagagtcatcgtttacggatttcagtgagaaaagtagtccggcc
gaatcgctactcgaacaaccggttaattatgagtcgagcagtgaaacggttgttgttgat
tgtgatagtttatcgaattcgagctctcaaacatttttggttgatgatttggcgaatcga
tatcgtaaaccgccgccaactcgaggtgcaaaacgaggacgaccacgtggttcaaggcgt
ggaaatcgtggcggtttaagcagagatgctattgttgatgttactataccggcggtgaac
agtgctgaaatcacagaacaaccgtatgattcgcctgtcaatccaaatgtgaataaagta
cgaagaggaccaggtcggccacgcttaaaaccgaacggtccaagcaatcagggaacacgt
ggctcaacacccaaatatcgaaagccaatgacgccattagtggtgccactcggttcttct
ccagcaccaactccaacggcaatgagtcctgagcgtttatag
DBGET
integrated database retrieval system
